SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26725_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		alanine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004813 F alanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006419 P alanyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0043039 P tRNA aminoacylation
GO:0046872 F metal ion binding
Transcript
Level		FPKM:16.53 TPM:13.91
ORF EntryO_TrvaMG13808_complete:A_TrvaMG_comp26725_c0_seq2
Sequence
(Nucleotide)
TTTTTTTAATATTTTAGTGTTGTATTTCGACAAAATAAGTTATTACTACAATTTCAGTAT
AAATATTTAGTTTTTACAACTAACACAATTAGTGCAACTTGCACTTAGCAAACTCGTTAG
CAATGTCGATGGCTTCGTTAAGTTTATTCGGATTATTTCCAGATGCTTGTGCAGACTCGG
CCTTGCCGCCTCCTTTACCACCGATTACATCGACGACAGATTGTACCCATTCAGAAGCTA
ATAATCCTTTCTCCACATCATTTTTGGGCACAGCAGCCAAACAGTAAATCTTTTTGGAGT
CATTATCGACTGAGAAGAACATAGCAGCTGAATTAGGACAATGCTGTTTGACTTGTTTTA
AGGCACCATCCAAAGCTTTTGTGTTACCAAAAGCTTTTAATTCAGACACAATATATTTAG
ATTCTTTGTGTTCAAGGCATAATTCTTTAGCCTTTTCAGCAACCTGTGTAATTACTGCAG
CTTTTGCTGCTCTTTCTTTATCATCCAGTTGTTTTTTCAAGTTCTTTAACATGTTTCGAA
GTTCATCTTTTTTCCAATATGATATTTGAGCTTGAGAAATTTCATTTGAAAGTTCTACAA
TTTTCTTGGTTACTTCTTTTTGATTAATGTTTTCGTTTTGTTCTTTTATATAATTAGCAA
GATTGTTTACTTCATTTTCAAGAATACTTAATTTATTTATGGCTTTTATGGCTTCAGGTC
CTGTAAGTGCAACAATTCGGCGGATTCCTTTAGCTATTCCTTCTTCACTTACAATGACAT
ATTCACCTATATGACTGGTACGGTGTAAATGGGATCCACCACAAAATTCAACTGATGTCT
CAAATCCTGTTGGAGCATCAGGATTTTTTATAAGTTCTTCGACAGGTACTCCAACTGATA
CAACTCGGACTGGATCAGGATAGTGTTCATCAAACATAGCCCTCAGTCCATTGATTTTTT
TTGCATCTGATAAGTTAGTATAGTTTGCATAGACTGTCTTATTTTTTGCAATAATATCCT
TTATTTCATTTTCTGCATCTTTGATTTGCTGGACAGTCATGGGACCTTTATTAGTAAAAT
CAAATCGCAGCCTATCAGGCATAACTAAAGAACCTCTTTGATCAGAATCATTGCCAAGAA
CTTTTCTTAAGACATTGTTTAACACATGGGTCCCAGTATGATTATTCATAACAAGTCTTC
TTCTTTCTGTATCTATGTGTAGTGATAAAGTATCTCCTACTTTTAAAGTACCTTCAACCG
TTCCAGTGTGTAGAACATAGCCACCTTTAACTTGAACATTTTTAACTGTAAACTCAACAG
CTTCATCATCTACTTTCACCATGTATCCCTCATCAAAGATTTGACCTCCTTGCTCAGCAT
AAAAACTACTGCGATCTAAAATTACTCCACACTCTTGGCCAGAAAAAACTTCATTTACAA
ATTCCTTATTTCTTCGCAAAGCCATTATTTTCGCTGTACATGGCGCAAAGCTGTAAAGTG
CATCCTTATCTGTAGAAGATGGCAAATAATTGTATTTTGGAGAATCATCAGTAGCAGGAA
TCCCAGTATCTTGTAAATGACTAATAGCATGTATATCTAATGCTAGTAAATCTTCATGAC
CTGCACTTTTGCCTTGAGAAATTAGTTGAGATTCTTTTTTAGATTTTTCATAACCTTCCA
TGTCTACAGTAAGACCCTTTTCTTCACACATAAGCTGGGTTAGATCAATCGGAAAACCAT
ATGTGTCATAAAGGCGCCAAGCAACATCTCCAGGTAAAGTTTTTGAATCATTTAGTTTCT
CTATGGTTCTGTAAAGTAAATTCCTTCCACGCATCAATGTTTTAAGAAATTGTACTTCTT
CTTCATTTATAGTTTGTATAATTGAATCTGGATCCTTTTTAATTTCTGGGAAAACATCAC
CCAACAAATCAACTACTGTCTTAACTAAAGATCCAAAGAATCCTGGTTTAGCATTAAGTT
TCTCTGAAGCATACCGCACAGCTCTTCTCAGAATTCTACGTAACACATAACCGCGTCCTG
TATTATCAGGACAACCGCCATCTGACAAAGCAATTGTCAAAGTCCTAGCATGGTCAGCTA
AGACACGGTAAGCCATGTCTATTCCATCGACATCATCAGTACCTACTTTTCCAGAATATG
GTCTTACGCCAGTACCATTTTCAATTGCTTTGAATATTGGCATGAAGAAATCAGTATCAT
AATTGGCCCTTTTGTTTTGTATTACCGAAACTAGCCTTTCAAGTCCTAAACCACAATCAA
TATGTTTTTTGGGTAATAATTTCAGGGTGCCATCAGTTTCTCTATTAAATTGTATGAACA
CTAAGTTCCAAATCTCCAGTACATCAGGATCATCCATGTTGACAAGATGTGCAGCATCTC
GTCCTCCTATTCGGTCATAATGAAGTTCTGAGCATGGACCACAAGGGCCTGTTTCTCCCA
TCTCCCAGAAATTGTCCTTCATGCTGCCTGGAAGTATATGTGCCTCTGGTATGCCCAACT
TCAGCCAAATGTTTTTGCATTCAAGATCAGGTTCAAGACCAGATGCTGGATCTCCTCCAA
AATATGTTACATAAAGTCTGTCTCCTGATAACTTAAAGACTTCGGTTAAAAGTTCCCATG
CCCAAGCACATATTTCCTTTTTAAAATAATCACCAAATGACCAGTTTCCCATCATTTCAA
AAAATGTATGATGATAGACATCTTTACCTACATCATCTAAGTCATTGTGTTTACCGCCTG
CTCTGATACATTTCTGAGTGTTGACAACTCTCACATACTGAGCCATATCAGAGTTTGGAT
CTACTGATCCTAGGAAAATTGGCTTGAATTGATTCATCCCTGCATTTGCAAATAGTAAAG
TAGGATCATCTAAAGGAATAGTAGATGAAGAGTGTACATATTTATGACCTTTACTGATAA
AGAAATCAATAAAGGTTTTTCTTATTTCATTACCACTCATTGAAGTATCCATTTGAGTAT
GCAATGAATAGATAATCTGGCAACAACAAATTCCTATCTGGTTCGTCTTGTACTTTGCGT
GGTTTGCAGTACCAACAGTACAACCTAGATCATTAGCCCCCACTAAGCTTATCCACGTTT
CGAATTTCAAACCAACACAAAAGTGTCAAATCGTCAAAACCTGTGGTCAAAATGTCAAAA
GCTTATTTTATGTTTTTCTACACATTAAGAAAATAATTGTACGTGCTAAATAAATATAAA
GATGCTGCTGCTTCGACGTCACCGATAAGATCATAACTGAACATCACCAGCGTGTAGAGG
CTTTGCAGCCATCGCATGGCCATTGGGCTGGGCCACTAGCTGGCCCAGCGTATAGAGGAG
CTATTACACATATTCACTTATCTCTAA
(3387 bp)

- SilkBase 1999-2023 -