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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26720_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC4_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007283 P spermatogenesis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030154 P cell differentiation
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:5.82 TPM:4.90
ORF EntryO_TrvaMG13798_complete:A_TrvaMG_comp26720_c0_seq2
Sequence
(Nucleotide)
CGATTTTTAAAAATGTATTCCTACTCATATTTTCTGTATCGCAAATAAAATTGAAACTGT
TAAATTTATAGGATTAAACTAATAATCAGGAAAACTGATAAAAATTGTTATCTTTATAGA
CTGAATGACAAAGCACAGGTCATAATTAAACTTTAAAAAAATTGTAAAATTACAACAAAA
TGTTTTGTTGGGGCAATGCAACTCATCATGAACTCTGCATCGATGGATCACAAACAATCG
ACTTGGTCATAAAGCCCACTCTATCAAAATGGAAGGAAAGTGACCACATGCAAGCTGTAG
CTGCAGGAGAATTTCACAGTCTGTACTTGACAAATAGTGGCCACCTGTATTCATGTGGAA
ACAATGAAGTTGGACAGCTTGGTAGACAAACTAAGTCAGATAGTGGGGAAACTCCAGCTT
TAGTGGAAACATTTAAAGATTGCACAATATCAACAATAGCATGTGGCCTTCAGCATTCCT
TAGCAATAGATGAGTGGGGACAACCATTTAGTTGGGGATCAGATAGTATGGGACAGCTGG
GCAATAATTTAGGTGCTCATGCACAAGACAAACCCAAGTTTGTCAAAGGATTGGCAACAA
AAAATATAATACAAGTAGCCTGTGGAGCTTATCATTCTGTGGCTTTAACCAACGGTGGTG
ATCTTTACTCATGGGGTGCAAATAGTTATGGTCAGTGTGGTTTGGGTACTATATCAAGCA
AGGAAATGTCACCTCAACAAATTACATCATTAATTGGTGTACCTATTGCTTTAATAGCAT
GTGGCAATAATCATACATTTGTTTTATCAAAATCTGGGGCCGTTTTCGGATGGGGGAAAA
ATACTCATGGACAGCTTGGAATTCAAGATGTTGAAAGCAAATGCTATCCCACTCATTTAA
AGACCCTTAGAAATGTGAAGGTGTGTCACATAGCATGCGGTGAAGACTTCACTGTGTTCT
TGACTTTAGACGGCGGCGTGTTTACTTGCGGAACCGGCGAATACGGACAAACCGGCCACG
GTACAACGAGAGACGAACTTGTACCTAGAAAAATAGTTGAGCTGATGGGCAGCACAGTAA
CTCAGATAGCGTGCGGTCGTCGTCACCTGCTGTGCCGCGTGGGGGAGCGCGTGCTGGCGT
GCGGGTACGGCGCTCGCGGACAACTGGGCTGTCCGCACATGGCCTTCGCGCTGGTACCTA
CTCCTGTACCGTTCACACCTACTGACGAGTCGCCTTTTTCACCTGACACCTTCAAGGGTC
CAATCAGAGTGTTCGCGGGCGGCGATCACAGCTTCGTGGTACTGAAGGGAGACAAATCTG
GTCCCGTCGACTTCAGGACGCCGGACCATAGGAAACAAATACTGACCCTCGCTCTGCCCA
AGTTGGCAGCGTGTCAAGTCTTCAAAGACAAAGATTTTGTTAATCAGGATTTAATGGCGT
ATTTAGAGACGGTGTTCGGTTCGTTGGCGTGTGTGAATGCATCGTTTTTATTACCTAACA
ATGGTCACTACGGTTGTAATACTAAAGTGCCGGGAGTCGATTTGAGCAAAGCAGAAGAAG
CTTTCGCTTTGATCAGCCGGTTTGAGAATACTTCTATCAAGGAACTAATATTCAGTCATT
TGACAGATAACATAATAAAGAAAATGAAAACCTCGCCTCCTGACGCCGAAGCTCTGAGGA
TGTTTTTAATATTGCCGCTTTATCATGAAATGAGAAATCCTAGACGTCACGCTAAGTTAC
AGGGTCCTTTTGCCGAAGCTTTCAACAATTTATCAACTCATCCTCAGAGAATAGTTAATA
TGTGGTGGGAAGCGCAGACTACAGAATACTTTGAGATGCTCGTAGATATATTCAAAAGTG
TGGTTGTGTACGAACTTATGCAGCCTGTAGTTAGGACTTCTAAGAAAGTGCAATTCAAAC
ACAGCACAGTACAGATATTGAACACGTTAGCTTTGTTGAACAAAATTAACTTTACTAATC
CGAAGAAACCTAAAATACCGGCGGAGTGTTTCTACATTGAGGATTTGAGTGACCATGTTG
ATATAGCTTCCGATTACATTAACTGGTTATCAGATCAAACGTCGACACAGACTCACATGT
GCAACTATGCATTCCTATTCGACGTTCAATGCAAGTCCTTACTACTGAAAATAGATCAAC
AACTTCAAATGCAAATAGCAGTAAGCCGAGCCACCACACAAATATTTACGAGATTGTTCA
TGGATCCCACTTACGAATATCAAAGAGATCAGTTCTTAAACTTGACTGTGTCGAGGAACC
ATATAGTCAGAGATACGATGTTGCAAATCAGTAATCATGATACTTCGCAATTGAAGAAGC
CTCTCAGAGTTGAATTTATAGGTGAAGAAGCAGAAGACGCCGGTGGGGTTAAAAAAGAAT
TTTTCATGTTATTATTGAAGGAAATATTCGATCCCGTGTATGGAATGTTTAAACAATCTG
AAGAAACGAATATGATCTGGTTCTCTAATAACCCCTTTGAAGATGACGTAATGTATTACG
TTATTGGTGCGATTTATGGACTCGCAATATACAATTCCATTATAATATACGTTCCTTTCC
CGTTAGTTTTGTATAAGAAAATTCTCGGTGAATCAGTAATGATGGACGACCTGTCTGATT
TATATCCGACATTAGCTAATAGTTTGAAAAGCTTGTTGGAATATCCCGATGAAGATGTAG
AAGAGGTATTCGGATTATGTTTCGCGGTGAACACAGAAGTATTCGATCAAATACAAGTGA
ATCCATTGAAAGAGAATGGTGAAAATATACCCGTCACTCACGAGAACAAAGCCGAATATG
TTGAACTATACGTTAATTTCTTGCTCAATAAATCTGTTGAAAATCAATTCAAAGCATTCA
ATCAAGGATTTCAAAAGGTGTGTGGAGGTAGAATAATAAAATTGTTCAGATCTCATGAAC
TAATGTCTGTTGTTATTGGAAACGAAGAGTACGACTGGGAAATGTTTCAAAACAATTGCG
AATATAAAAATGGATACTCTGAATCTGATCAGCAGATTAAATGGTTCTGGGAAGCTTTCC
ACGAGTTATCGATTGAAGACAAGAAGAAGTTTCTACTGTTCTTAACGGGCAGCGACCGCG
TTCCTATACAGGGAATGAGAGATATTAAAATAAGAATCCAGCCAGTAGCAGATGACAGGT
ACTTCCCCGTAGCTCACACTTGCTTCAATCTGCTAGATCTGCCGCGTTATAAAACTAAGG
AACGACTCAAATATTACTTATTACAAGCTATACAACAAACGCAGGGTTTCTCATTAGTGT
GATTTTTTAACTAGTCTTAGCAAAAATCGTTGGTTAAAGTATTCGAAACGGTATCTTGAA
AATGCAAAGGTTTAATTTAAAAAAATCGTCCAAAATTTTTGATTACGTCATAATTTTCAT
GGTTCCGTTTCGAAAACTATTGTTGGGATTATTGATGTTGTTTTGTTTATCTATTTGTGA
TGAAAATTCTTTGAGAATTTTTGCTACGAAACACGGGTTCGTTATTTAAAATTGTTTCTA
GTGAATTAAGTTCATACACGACAAAGTGTGGCTTAAGGAGGCACTATTGTTCTCAGCACG
AGTGATAAAACTATGTAAAATAAATAAATATTTAACAAGCGTAACGTCAAATTTGTACTG
ATTTTTTAAATTGTTTTATCTGAGTATGCTACAATTAAATTATGCTACGAATAAAGTTTT
AAAATTTG
(3728 bp)

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