SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26720_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC4_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007283 P spermatogenesis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030154 P cell differentiation
GO:0042787 P ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:2.26 TPM:1.90
ORF EntryO_TrvaMG13797_complete:A_TrvaMG_comp26720_c0_seq1
Sequence
(Nucleotide)
AAACACTGCAAACATAATAGATTGAACACGTAATTAATTCGCAGTTTTCACCTGACACCT
TCAAGGGTCCAATCAGAGTGTTCGCGGGCGGCGATCACAGCTTCGTGGTACTGAAGGGAG
ACAAATCTGGTCCCGTCGACTTCAGGACGCCGGACCATAGGAAACAAATACTGACCCTCG
CTCTGCCCAAGTTGGCAGCGTGTCAAGTCTTCAAAGACAAAGATTTTGTTAATCAGGATT
TAATGGCGTATTTAGAGACGGTGTTCGGTTCGTTGGCGTGTGTGAATGCATCGTTTTTAT
TACCTAACAATGGTCACTACGGTTGTAATACTAAAGTGCCGGGAGTCGATTTGAGCAAAG
CAGAAGAAGCTTTCGCTTTGATCAGCCGGTTTGAGAATACTTCTATCAAGGAACTAATAT
TCAGTCATTTGACAGATAACATAATAAAGAAAATGAAAACCTCGCCTCCTGACGCCGAAG
CTCTGAGGATGTTTTTAATATTGCCGCTTTATCATGAAATGAGAAATCCTAGACGTCACG
CTAAGTTACAGGGTCCTTTTGCCGAAGCTTTCAACAATTTATCAACTCATCCTCAGAGAA
TAGTTAATATGTGGTGGGAAGCGCAGACTACAGAATACTTTGAGATGCTCGTAGATATAT
TCAAAAGTGTGGTTGTGTACGAACTTATGCAGCCTGTAGTTAGGACTTCTAAGAAAGTGC
AATTCAAACACAGCACAGTACAGATATTGAACACGTTAGCTTTGTTGAACAAAATTAACT
TTACTAATCCGAAGAAACCTAAAATACCGGCGGAGTGTTTCTACATTGAGGATTTGAGTG
ACCATGTTGATATAGCTTCCGATTACATTAACTGGTTATCAGATCAAACGTCGACACAGA
CTCACATGTGCAACTATGCATTCCTATTCGACGTTCAATGCAAGTCCTTACTACTGAAAA
TAGATCAACAACTTCAAATGCAAATAGCAGTAAGCCGAGCCACCACACAAATATTTACGA
GATTGTTCATGGATCCCACTTACGAATATCAAAGAGATCAGTTCTTAAACTTGACTGTGT
CGAGGAACCATATAGTCAGAGATACGATGTTGCAAATCAGTAATCATGATACTTCGCAAT
TGAAGAAGCCTCTCAGAGTTGAATTTATAGGTGAAGAAGCAGAAGACGCCGGTGGGGTTA
AAAAAGAATTTTTCATGTTATTATTGAAGGAAATATTCGATCCCGTGTATGGAATGTTTA
AACAATCTGAAGAAACGAATATGATCTGGTTCTCTAATAACCCCTTTGAAGATGACGTAA
TGTATTACGTTATTGGTGCGATTTATGGACTCGCAATATACAATTCCATTATAATATACG
TTCCTTTCCCGTTAGTTTTGTATAAGAAAATTCTCGGTGAATCAGTAATGATGGACGACC
TGTCTGATTTATATCCGACATTAGCTAATAGTTTGAAAAGCTTGTTGGAATATCCCGATG
AAGATGTAGAAGAGGTATTCGGATTATGTTTCGCGGTGAACACAGAAGTATTCGATCAAA
TACAAGTGAATCCATTGAAAGAGAATGGTGAAAATATACCCGTCACTCACGAGAACAAAG
CCGAATATGTTGAACTATACGTTAATTTCTTGCTCAATAAATCTGTTGAAAATCAATTCA
AAGCATTCAATCAAGGATTTCAAAAGGTGTGTGGAGGTAGAATAATAAAATTGTTCAGAT
CTCATGAACTAATGTCTGTTGTTATTGGAAACGAAGAGTACGACTGGGAAATGTTTCAAA
ACAATTGCGAATATAAAAATGGATACTCTGAATCTGATCAGCAGATTAAATGGTTCTGGG
AAGCTTTCCACGAGTTATCGATTGAAGACAAGAAGAAGTTTCTACTGTTCTTAACGGGCA
GCGACCGCGTTCCTATACAGGGAATGAGAGATATTAAAATAAGAATCCAGCCAGTAGCAG
ATGACAGGTACTTCCCCGTAGCTCACACTTGCTTCAATCTGCTAGATCTGCCGCGTTATA
AAACTAAGGAACGACTCAAATATTACTTATTACAAGCTATACAACAAACGCAGGGTTTCT
CATTAGTGTGATTTTTTAACTAGTCTTAGCAAAAATCGTTGGTTAAAGTATTCGAAACGG
TATCTTGAAAATGCAAAGGTTTAATTTAAAAAAATCGTCCAAAATTTTTGATTACGTCAT
AATTTTCATGGTTCCGTTTCGAAAACTATTGTTGGGATTATTGATGTTGTTTTGTTTATC
TATTTGTGATGAAAATTCTTTGAGAATTTTTGCTACGAAACACGGGTTCGTTATTTAAAA
TTGTTTCTAGTGAATTAAGTTCATACACGACAAAGTGTGGCTTAAGGAGGCACTATTGTT
CTCAGCACGAGTGATAAAACTATGTAAAATAAATAAATATTTAACAAGCGTAACGTCAAA
TTTGTACTGATTTTTTAAATTGTTTTATCTGAGTATGCTACAATTAAATTATGCTACGAA
TAAAGTTTTAAAATTTG
(2537 bp)

- SilkBase 1999-2023 -