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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26719_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_M-like_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0044822 F RNA binding
Transcript
Level		FPKM:7.58 TPM:6.38
ORF EntryO_TrvaMG13794_5prime_partial:A_TrvaMG_comp26719_c0_seq2
Sequence
(Nucleotide)
TTTAGATAAAAATAATTTATTAGTCTTAAAGCATCTAATATCACAGATTTTTCAGTAGAA
TTCTGTCTTCTCCTTAACCTCATCTCGATTTTTTGAAATATTTAAATTGCACTTTAACCG
CTTCGTAAATATTTAAACACCAGTTTTTTAGATTTCAATATTTTCTCTTATTCCAGCATT
TTTTTCTGGTTTGGTACGATTTTTCCATCATATATCTTTGAATTCATTAACCTTTTACCT
GAAATACAGATAGTTACGTGAATATAAAATAACACGATACTAGGAACGCAGCATGAATGA
TTTGCATGACATAGGTACTCCCACTGTTCTGTAATAGTCCTGACGAACCTTCTTCATTCG
AAAAACATGATTTTTCTAACCAAAGAATTATTATAAAATGACAACAATCGAGTGCCGTTA
TTTGAATAGAGCTTTCAAAATGTAGGGCGACTCAGTGTTCAAAACATACCAACCGAACGG
TGAACCGACCAATCCTCTCGTTAAAAGGACAGACTCAGCCAGAAACACATCCACAGATTG
GTGTTGCTTCAAACGTAGGAATTCGTAGATTTCTCATCTGTTGGAAATACTGTTAACGGC
TTCGATCTAAAGGAAAGTCAAAACACTCTATGCATAATATACGAGATGTCACTCAAGATA
ACATCAAGCTCAAAAGATCTATAGAAAACCCCATGCAAGCCCAACAGAAATGATATGCCT
TATTCGATCAACTACACTTACCAATGAACGCAATATCTTCTAAATGAATGTCTGCGATGC
TCTGATCAAAGTCAAAACAATTAGAGTCTTCAGTTTTAATAACACTATTGAACATTAGTT
TATCAACTCCGTCACGATCACAACAATTATTTAGTTTTTATTTATGAATAAATTAAAAGT
CTTTAAGTATTCCCAGCTGCTCCTAAACGTCGTATGATTCGATGATAACTTTCATTTTCA
TTGAGTTGAGATGGCTCCCACAAAACATCGCCAACAACCATCGTAGTCATCACAAAACAC
AAACAAGATACGCGGCAGCGTGTCAAACCAAGTTTTTAATATTATAATTAACAGGAACAG
AAAATAATTATTAACGCAATCACATTTTAACTTTTCGAACGTCGAAAATCGTCCATGTAT
AATAGGCAGGTTCTTCTGTACTCCATGGACATGCACTAATTGCCAACATTCAATTTTTCA
ATCAAAGTAGTTTATTCATGAACATAGCTAACTCACACAATACTTTTTTCAATTCTGACT
GCAGTTTTCGAGGATAGAGTTTTGAAGCAAAACGATTAGGATTAAATTTTATAATTTTAG
ATGGGAAATATTTCTTCCAACAATCAAATGATTGGTTCCAGTGGATGGAAGATAATTAGT
ATAATTTGACAATAGGATCAGAGACATTAGGTTTTTTGAAGAAATCTAATTTGTAAAGTT
TATGAATACCATTTTTAAATTATGTTATATAACAAAATTATTGTGACGTCACAAGTCAGG
AGAGTATCCTGACTAAAGACAGCAAAACAATTGAATAACAAAAATCGAGGATGTTTTATT
TGTGACACCAGCAGAGCATCTTAAAACATTTCAAATTAATATTTTCTCCTCAACATCCAC
ATAGTATGTTACAGATACTGCAAATGAAATAACTATTAGACAACAACAAGCTAAATCTTT
CTATAATTTTATTTATTGAATTCTCTCGTCAAAAGGGTACAGCAAAAAATACCAAGCTTA
CACTATATTAAACCTTAATTACAAGAATAGTCAAAATATAAACTTCATTTTAAAGAGATT
GGATCACGAGACAAGACGAAAGTTAAAACAGGAAATAATCCAGGCAGCCGATTTCATACA
AACCCCACAATAGAACGACTTCAAACACTTTCTCCTTGCTATTTAAAAGAAACGGACGTC
TATTGTACGGCCATCGATGCGAGTCCTGTCAAACATTTTTATTGCTCTCTCAGCATCCCA
TTCCTTGTGGAATCGAACGATAGCTGTGTCTGGTGCGGTCATTTCAGCAAATTTAACGTC
GCCGCATTCACTGAACTTTTCTCTGATCAGTTGCCACGTCACTGTTGGTGGTAAATTGGT
AATAATAACCATGTCTGACAGTTTATCTCTGTTGGGCTGTTGTTGGTTGTGCACTCCACT
GTCTCGGCCATATTGCTGGTTTGGCACTGACACACCAAGCGGTCGGTTTGTGTGTGTACC
AGACATTGGTCCAGAGTTCATTTGATTGCCTCCCATCACATTAGAATTGAGACCGGAATT
GAGAACATTAGAGTTCATGTCATTATTTCCAATCCCCAAATTAGCTTGGTTAACATTTGC
CTGGGCCGTAAGCACTGTTGCTAAATCATTAGCTGTCAAACCTTGCTGCAGCAACTGATT
TTGCAAGGCTCCCAATCCAGTCAAACCTAAAGCCTGAAGGCCGATTCCTCCAGTCAATGC
AGAACTTGGGTTCAAAGCACTTGCTGAGAGTCCTGTTCCCAATCCATTCAAAGCCACACT
GGCAGCTGTGGGAACCGCACCCAAAACACCTGCCCCTAAATTCGGAGCTGTATTTGTCAA
ACCAATGTTGGCCGTATTGGAATTCTGTGGCAAATTTCTGGCTACATCACGTAAAGGTTC
CCCGTTAGGTCCCAGCCCTATGCCAATGCCTTTCAAACCATCAGGCAATTTGAGTTCACT
TTTATCAGATCCTCGGTCCATACGCACTGTCATTCTGCGCTCATATAACATTTGCTTGTC
AAACATTGAAATGGCCTGTACAGCCTCAACAGGATGGTCATACTCAATAACAGCAAAACC
TCTGCTGTTACCATCTTTGTCGCAAGCCAGGTCAATGTTTCGTACTTTACCAGCCATCTT
AAACACTTCTTTGATTTTAGCTTGATCAGCTTTGTAGTCCAAATTTGCTACAAAGACTTT
CTTCACTAGTGGTGGTTGCACATTAATTGATTCCAAAAACTGTAAGCTTAGTCCATATGT
GTTGAAATTTTCTGGTTCTCTTGGTTTATTCATACCCCAGTTATCTTTGTCATCTCTGTT
TCTTACTTCTCTTTGTGGGGGTCTTGAGTTGTGCATTCTCCTTTCACCAGTTTCTTCTTT
CAAAACCAGTTTTCTTCCATTCAGTTCATAGCGATGCATCACAAACAGTGCTTTCTTCAT
TGCTTCTGTGTTTGTAAACTCCACAATACCACATCCTCTTGCTTTCCCGTTTTCATCAGT
CAATAATTCTACATAAGCTACATCACCAACTTTCTCTTTAAATAAATCTTTTAATTCTGT
CCAGCGAAATTCGTATGGTATATTTGATACGAATAAACGCCTGCTTTCAGGGCGATCGCG
TTCAGAAGACCGGTCGCGATTGGCATCCGAAAACCTTGATGGTCTATCACCACGCCTCGA
GCGATCACGTTCTTTCTCTTTTTGAAGATCCATATTTTGAAAACTTTTTACAAAACTACG
TTTCTGAAAATGCAAGTCTAATATAATTATTACACAATGAAGGCTGGATATTACAAATTT
CACAAAATATTTGTATAGAAAATCGACGCTAA
(3572 bp)

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