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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26719_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_M-like_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0044822 F RNA binding
Transcript
Level		FPKM:1.83 TPM:1.54
ORF EntryO_TrvaMG13791_5prime_partial:A_TrvaMG_comp26719_c0_seq1
Sequence
(Nucleotide)
TTTAGATAAAAATAATTTATTAGTCTTAAAGCATCTAATATCACAGATTTTTCAGTAGAA
TTCTGTCTTCTCCTTAACCTCATCTCGATTTTTTGAAATATTTAAATTGCACTTTAACCG
CTTCGTAAATATTTAAACACCAGTTTTTTAGATTTCAATATTTTCTCTTATTCCAGCATT
TTTTTCTGGTTTGGTACGATTTTTCCATCATATATCTTTGAATTCATTAACCTTTTACCT
GAAATACAGATAGTTACGTGAATATAAAATAACACGATACTAGGAACGCAGCATGAATGA
TTTGCATGACATAGGTACTCCCACTGTTCTGTAATAGTCCTGACGAACCTTCTTCATTCG
AAAAACATGATTTTTCTAACCAAAGAATTATTATAAAATGACAACAATCGAGTGCCGTTA
TTTGAATAGAGCTTTCAAAATGTAGGGCGACTCAGTGTTCAAAACATACCAACCGAACGG
TGAACCGACCAATCCTCTCGTTAAAAGGACAGACTCAGCCAGAAACACATCCACAGATTG
GTGTTGCTTCAAACGTAGGAATTCGTAGATTTCTCATCTGTTGGAAATACTGTTAACGGC
TTCGATCTAAAGGAAAGTCAAAACACTCTATGCATAATATACGAGATGTCACTCAAGATA
ACATCAAGCTCAAAAGATCTATAGAAAACCCCATGCAAGCCCAACAGAAATGATATGCCT
TATTCGATCAACTACACTTACCAATGAACGCAATATCTTCTAAATGAATGTCTGCGATGC
TCTGATCAAAGTCAAAACAATTAGAGTCTTCAGTTTTAATAACACTATTGAACATTAGTT
TATCAACTCCGTCACGATCACAACAATTATTTAGTTTTTATTTATGAATAAATTAAAAGT
CTTTAAGTATTCCCAGCTGCTCCTAAACGTCGTATGATTCGATGATAACTTTCATTTTCA
TTGAGTTGAGATGGCTCCCACAAAACATCGCCAACAACCATCGTAGTCATCACAAAACAC
AAACAAGATACGCGGCAGCGTGTCAAACCAAGTTTTTAATATTATAATTAACAGGAACAG
AAAATAATTATTAACGCAATCACATTTTAACTTTTCGAACGTCGAAAATCGTCCATGTAT
AATAGGCAGGTTCTTCTGTACTCCATGGACATGCACTAATTGCCAACATTCAATTTTTCA
ATCAAAGTAGTTTATTCATGAACATAGCTAACTCACACAATACTTTTTTCAATTCTGACT
GCAGTTTTCGAGGATAGAGTTTTGAAGCAAAACGATTAGGATTAAATTTTATAATTTTAG
ATGGGAAATATTTCTTCCAACAATCAAATGATTGGTTCCAGTGGATGGAAGATAATTAGT
ATAATTTGACAATAGGATCAGAGACATTAGGTTTTTTGAAGAAATCTAATTTGTAAAGTT
TATGAATACCATTTTTAAATTATGTTATATAACAAAATTATTGTGACGTCACAAGTCAGG
AGAGTATCCTGACTAAAGACAGCAAAACAATTGAATAACAAAAATCGAGGATGTTTTATT
TGTGACACCAGCAGAGCATCTTAAAACATTTCAAATTAATATTTTCTCCTCAACATCCAC
ATAGTATGTTACAGATACTGCAAATGAAATAACTATTAGACAACAACAAGCTAAATCTTT
CTATAATTTTATTTATTGAATTCTCTCGTCAAAAGGGTACAGCAAAAAATACCAAGCTTA
CACTATATTAAACCTTAATTACAAGAATAGTCAAAATATAAACTTCATTTTAAAGAGATT
GGATCACGAGACAAGACGAAAGTTAAAACAGGAAATAATCCAGGCAGCCGATTTCATACA
AACCCCACAATAGAACGACTTCAAACACTTTCTCCTGTAAGCACAAAAATTTACAAATTC
ACTAACTAAAAAGACATCCATACAACATTTAAGGTTCAAATTAAACTTCAATGATTTCAA
ACGTACTGGGTTTCACCAAAGATGAATTAACATGAGTACGAAGACATTACTCTTGGATTT
AATCCCCTGTTAACTCATCCAGCATCTCACGAAGTGAGAGACAATTTTACTCTCAAAGCA
GTAGTTCCTAATGGAAAACAAAACCTCCACAAGTCAGTTTTACAAATATGAAATAAATAT
TTGTATATGTGATATTATCGTTGATACGTAATAATGTTTAAATAATCACAACACAATTTT
TTTTTCTAATTATTTGTAAATTTTTAATGTTTTGATGGTGAAATCAACCAGTAGTTTTAA
ACTCTCAAGTATAGACCACAACGCGAATAACAAAGATTTAGTTTTTCAGAAAATTAGTTC
TGTCAAACAAAAAGGTTGAAGTAAGACAGATTTCGAAGACACGACCCGACGAATCGTAGT
TATTGTAATTCCTAATGTTTCACTTACCTTGCTATTTAAAAGAAACGGACGTCTATTGTA
CGGCCATCGATGCGAGTCCTGTCAAACATTTTTATTGCTCTCTCAGCATCCCATTCCTTG
TGGAATCGAACGATAGCTGTGTCTGGTGCGGTCATTTCAGCAAATTTAACGTCGCCGCAT
TCACTGAACTTTTCTCTGATCAGTTGCCACGTCACTGTTGGTGGTAAATTGGTAATAATA
ACCATGTCTGACAGTTTATCTCTGTTGGGCTGTTGTTGGTTGTGCACTCCACTGTCTCGG
CCATATTGCTGGTTTGGCACTGACACACCAAGCGGTCGGTTTGTGTGTGTACCAGACATT
GGTCCAGAGTTCATTTGATTGCCTCCCATCACATTAGAATTGAGACCGGAATTGAGAACA
TTAGAGTTCATGTCATTATTTCCAATCCCCAAATTAGCTTGGTTAACATTTGCCTGGGCC
GTAAGCACTGTTGCTAAATCATTAGCTGTCAAACCTTGCTGCAGCAACTGATTTTGCAAG
GCTCCCAATCCAGTCAAACCTAAAGCCTGAAGGCCGATTCCTCCAGTCAATGCAGAACTT
GGGTTCAAAGCACTTGCTGAGAGTCCTGTTCCCAATCCATTCAAAGCCACACTGGCAGCT
GTGGGAACCGCACCCAAAACACCTGCCCCTAAATTCGGAGCTGTATTTGTCAAACCAATG
TTGGCCGTATTGGAATTCTGTGGCAAATTTCTGGCTACATCACGTAAAGGTTCCCCGTTA
GGTCCCAGCCCTATGCCAATGCCTTTCAAACCATCAGGCAATTTGAGTTCACTTTTATCA
GATCCTCGGTCCATACGCACTGTCATTCTGCGCTCATATAACATTTGCTTGTCAAACATT
GAAATGGCCTGTACAGCCTCAACAGGATGGTCATACTCAATAACAGCAAAACCTCTGCTG
TTACCATCTTTGTCGCAAGCCAGGTCAATGTTTCGTACTTTACCAGCCATCTTAAACACT
TCTTTGATTTTAGCTTGATCAGCTTTGTAGTCCAAATTTGCTACAAAGACTTTCTTCACT
AGTGGTGGTTGCACATTAATTGATTCCAAAAACTGTAAGCTTAGTCCATATGTGTTGAAA
TTTTCTGGTTCTCTTGGTTTATTCATACCCCAGTTATCTTTGTCATCTCTGTTTCTTACT
TCTCTTTGTGGGGGTCTTGAGTTGTGCATTCTCCTTTCACCAGTTTCTTCTTTCAAAACC
AGTTTTCTTCCATTCAGTTCATAGCGATGCATCACAAACAGTGCTTTCTTCATTGCTTCT
GTGTTTGTAAACTCCACAATACCACATCCTCTTGCTTTCCCGTTTTCATCAGTCAATAAT
TCTACATAAGCTACATCACCAACTTTCTCTTTAAATAAATCTTTTAATTCTGTCCAGCGA
AATTCGTATGGTATATTTGATACGAATAAACGCCTGCTTTCAGGGCGATCGCGTTCAGAA
GACCGGTCGCGATTGGCATCCGAAAACCTTGATGGTCTATCACCACGCCTCGAGCGATCA
CGTTCTTTCTCTTTTTGAAGATCCATATTTTGAAAACTTTTTACAAAACTACGTTTCTGA
AAATGCAAGTCTAATATAATTATTACACAATGAAGGCTGGATATTACAAATTTCACAAAA
TATTTGTATAGAAAATCGACGCTAA
(4105 bp)

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