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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26695_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin-protein_ligase_E3C_[Papilio_machaon]
Ontology
GO:0000209 P protein polyubiquitination
GO:0000502 C proteasome complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:3.04 TPM:2.56
ORF EntryO_TrvaMG13721_5prime_partial:A_TrvaMG_comp26695_c0_seq1
Sequence
(Nucleotide)
ATTGTACATTAAAGTCTAGTCATTGTGTACGATTACCCGTTCTCTTTCAAACTAATAATA
AACACGAACCACAAACTGAGAAACTTTTGAATTATCATATTCAAATCATGTATTCATTTG
AGGGAGACTTCAGACGGAAACCGCAACAAAATTTGGCTGGTGCGAGTGCTTCTAGAAAGA
CTGATCGAGATTCTTTGATTCAACAAACACAACTGCAAAGACAAAAACGAGAGGAACACA
GAAAGCGTTTAAATAGTGTAACAAAAATACAAGCTTTTGTCAGAAGTTTCTTAATCCGTC
AAAGATGCAAACAAGTTGAGAGGGATGAGTTTGATAGTATGTTTCCCAGAATAAATATTG
AGGATCAAGTAACACTGTCTGCTCTTTTAACAAAAATATTTTTCTTTTACAATGATAAAA
CTGATGTCTCCAGATTGGTATCCATATCACAACTATTATTAAAACATTGGAAAAAAGTTT
TCCATAATAGTGGAGCAAGTATACAAATAAGACGGTTACTTGCATTGCATTTGCGACTTT
TGAAGAACAATAATGAAGTGCCTATAGCAGTTCCACTAAGGATGTTTGAAGTATTTACAT
CCATAAACACAGTAGAAACGGCCATGAACTGTGATGAAGCATTACGATTTGTGGCCAATA
CATTCCTGTATTTGATAAAAAGAGGCTATTTCAAAGATCTGTGCAACTTGTTATGTGAGA
AGACCCCGCCAATGTTTGGTCCATCGCCCAATCCACCAACACCATTGAGTGGAGCACTAC
TAGAATTAATACAAAGGCCAATATCATTAATTATGAGGGTCAACATTCCTTATTATGAGG
ATACAGTAACAACAGAGTTTGTAGCAGCATTTTTATGTAATCCATACCCTGAGCCAGTGG
AAATGTTTATTTTACCATCATTGGCTCAAGAATCTTCTAGAACAATATCATTTTTGGCAT
TAATAAAATGTCTACAAGATGATGATAAATACCTAAGTAAAAAAATTGTTAGTGATTCTT
GGTTGCTGCATTCAGTTTTAGTTTTAGAACCTAAGACATTTGCAAATGATTTGAAAAACA
TGGACAACATAAGGCTGCCGAACAACAGTATAGTTACGGAATATCTTAAGGTTATAGCTA
GGTTAACTGAAAATGTATGTAATAAACAGATCTCGTATGAATTCGAAGATTCACTGTACA
GTCAAGAAACAGCAGCTGACAAAGACGACAGTGATGATGAAACTGAAGTTGATACTATTT
CCATTCGAGAACAAACTGTACTAACGAGATGTATAGAGTTACTAAACGATCCGGATCGAT
GTATAATGGAAACAATCACACAAATAACTGATAATGATCTGAGTGATGAATTCTTAGAGT
ATATGTCTGAAATCTGTCATAATTTGCTGTTGAGTCATCGTTTAGCTTTACATAAATACA
GGTTACTATACACGTTAGCATTTAAACCGATATTCCTGCGCGGTCTATGGCGTTGGATGT
GTAACTTGAATCACGTATCTTCGTTTGGAGGATCTCCTACTCCTCTCCTCTCTGCGTTGT
CACGTGGCATGGGTGCCGATACATCTATAATAGATGTACAAAGATTGCTGGCGCCGTTAG
CTGTCTTCTGCGCTCTGTTCTCGCTGTTAATTGGAACGTTACACGATACAGAATTTTGCA
GAGATATTGATGATGATGAAAAAATGATCTTACCAAGCTCAGGCGGCGGAGGAAGAGTCC
ATGCGTTTGAGTTCTCCGAGCTCGGCGGCCTGTGTAAAACGCTGCGACAAGTCTGTCTCG
GCCTCATAGAGCTGGCCTACCCCGAGTCAAGAGTCACGGTGTGCGGACAGTACAGACAGG
TTGCAGGAAACACGGAGTTAAGCACCGGGAAAAACAGAACGCCGACCTGGTCACATCTGT
TCAAAGTGGTGACGCACCTACTGCGTGCGCTGTACACGCGCGACTCGCGACTGCATTTCT
GCGACGCGACGGCGTGGCCGGCTGAAGTCAACGTGCTGGAGTCGACGGGCGCGGCGCTCG
CCACGCACGCCGTCCGCTCGAGGCCCTTCCCCAGCCATCTTAGACAACTCAATCTGTCAC
AAGAAGAGGGGCCTCCATTAACAATTAAAGAATTAAGAACAGTTACAATACTCAAAGAAA
TACCATTTGTTGTATCGTTTTCTACGAGAGTCTTGATATTTCAGTCTCTACTAGCAAAGG
AAAAGCAAGACAACTGGTATGAAATGACGAATTTCAGCGAAGGACCCTTTATAAATATAA
GCGTAAGACGCACGCATTTGTATGAAGACGCTTTCGACAAGTTGAGTCCAGATAATGAAC
CGAATATGAAATTAAAGTTAAGAGTACAGTTGATCAACCAAGCCGGAGCTGAAGAAGCTG
GTGTCGATGGTGGTGGTTTATTCAGAGAATTCTTATCCGAACTACTATTATCAGCATTCG
ATCCAAACCGAGGTCTATTTCGATTGACCAAAGACAACATGCTATATCCCAATCCCGGTG
TGACCTTGTTGTATGATGACTACCCAATGCACTATTACTTTGTTGGCAGAATGCTTGGAA
AGGCCCTATACGAGAACTTACTAGTGGAGCTGCCTCTAGCGGAGTTCTTCCTCGCCAAGC
TGTGTTCGTCCCGCGAGCCCGACGTGCACGCGCTGGCGTCGCTCGACCCCGCGCTCTACC
GCGGCCTGCTGCTGCTCAAGGCGCATCGCAGGCATGACGTCACGGACCTCGGACTGGACT
TCACCATAGTTACTGATGAACTAGGCGAACAGAAGATAGAGGAATTAAAACCCGGTGGTG
CCAACATTCCTGTGACCGCTGAAAATAGGATAGAATATATTCATCTAGTCGCTGATTACA
AGTTAAACCGTCAAATAAGATCTCAGTGCAACGCGTTCAAGCGCGGCGTGTCGTCCGTGG
TGAACGAGGACTGGCTGCGTATGTTCTCGTGTCGCGAGCTGCAGCACCTCATATCGGGCG
CCGAGGTGCCCATAGACCTCGACGATCTCAAACGGCACACGCTCTACTCAGGAGGATTCT
CTGAAACTCATCCGACCGTGCAATGTTTCTGGAAAGTGGTCGAGAAACTCACGGACGATC
AGAGGCGACAACTATTGAAATTTGTCACGAGTTGTTCGAGGCCACCGTTATTAGGATTTA
AGGACCTTCAGCCTCCATTTTGCATCCAGTCAGCCGGTCCGTCGGATCGCCTGCCGTCGT
CGTCGACCTGTATGAACCTGCTGAAGCTGCCGGAGTTTCCTTCCGAAGAACAACTCGCTG
AGAAGTTGCTGTACGCGATACAATCCGGCGCGGGATTCGAGCTCAGTTAAAGTATTTTAT
TTATTACACAAATCATAATATAATGGAGAGATGAAAAATTTTGACCGTTTAGATCGATTA
ATTGATAATAATTTAAAATTAAAAACATTTTTAAACCCTTATTAAAATTTGACTGACGCC
ACAATAATAAACCTCTCA
(3498 bp)

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