SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26675_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_YTH_domain-containing_family_protein_1_isoform_X3_[Papilio_machaon]
Ontology
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:1903679 P positive regulation of cap-independent translational initiation
GO:1990247 F N6-methyladenosine-containing RNA binding
Transcript
Level		FPKM:1.55 TPM:1.30
ORF EntryO_TrvaMG13654_complete:A_TrvaMG_comp26675_c0_seq1
Sequence
(Nucleotide)
GTCCATTCGTTTTTATGTTGAATGTTTAGTGAAATTTGTACAATTACAGACTTTTTAGAC
AATATTTGGTGATTCTCTTAATTTTAAAGACTCAGAGTAGTGAAACCGATGTGATACCTT
TCGTTTATTGTTGTGTACAAAGACTTCAATAAGTGTTTTAGGTCCTAAAATCCCGGCCAA
TGTCAGCAGGCGTGTCAGATCAGCGGATGAAAGGGCAAGGGAATCAAGTTACAAATGCAC
CGAAAGAACAACATTTAGAGAGTGGAGGCGACGAGTTAGCTGAGGTACCATGGCGGCATC
AGCAGCAACCTTCCTATGCTCCTCCTATCTCGTCAGCGGCCGATCCATACAGCGCAGCAG
GCGTATTTGGACCGTCAACTACTCCATTCTCGACAGCGGCATTCGGGCAGCCGGCGTCCA
CATTCAATTACTTTCACGGCAACGGTGATTACTCGACTTGGGGACAGTTAGGTCGTGCTA
AACAATACGATGATTACTATAGGGCTGATGGACTTTATGTACCCGATGGTGTTAAAGCTG
TCGACGCGGGCGTGCAAGCTTTGTCGCTCGGCGATCACAAACAGGACAAGGAACGTCAAC
CGGAACTTAAGGAAATTTCGTCAGCGTCACAACCCAAAAAGATGACGTGGGCGTCTATTG
CCAGTCAGCCGGCCAAGCCGGCGCCGGCATCGCAGAGCGGTATCATTAAGAAGAAAGGGC
CGGGAATGCCACCTCCACCGATAATACCCGGCAAGCACAATATGGACATCAGCACGTGGG
AGGCGGGGAAATCTGCTAATGTTGTAAGTGCACCACCGCCGCCGCCTCCGACCATGCAGC
CTCCCGTACAACCGACGCAACAGCCGCTACCAGCACCGGCCCCGGCTCCCGCAGCCGTTC
CGATGCAACAGCGCGGGCCCCCACCGCCGCAACACCAGCCCCCGCCGTCGTGGACGCACG
CGCCCCGCGCTCCGCCGCCGCATCAACCGATGCAGCCTCATCAGCCGCGGCCTCCCATGC
CAGCGCCGCCGATTGTCTCGCAACCACCGCCGGCGACGGTGCCTGCAGTCCCACATCCGG
TGCTTGATGAACTACGTATTAAAAATGATTATAATCCGAAAGAGTTTGACTTGACCGCCC
CGAACGCGCGGTTCTTTGTCATTAAATCTTATTCGGAGGATGACATACATCGCAGTATCA
AGTATGAGATATGGTGCAGTACTGAGCATGGCAACAAACGTCTCGACGCTGCTTTTCGTG
AGAGAGAAAAGGAGGGTGGAATGGTGTACTTGTTTTTTTCAGTGAACGGTAGTGGACACT
TTTGTGGCATGGCACGTATGATGAGCGCTGTCGATTACAATTCCAATTCCAGCGTATGGT
CGCAAGATAAATGGAAAGGGCAATTCCGTGTTAAGTGGGTTTATGTAAAGGACGTCCCGA
ATGCACAACTTCGCTTTATAAAATTAGAAAACAATGAAAATAAACCGGTTACAAACTCGC
GTGATACTCAAGAAGTTCCACACGCCAGGGGTCTACAAGTGCTGCGCATAATGCACTGCT
ATTGTCACTCAACGTCTATTTTCGATGATTTCATTCATTACGAAAGACGTCAAGAGGAAG
AAGACTCGCGAAAAGTCCCGAGTATTCCGGAAACTAATCGCGACGATCACGAGGGCGGTC
GCGGTTATCGCAATTATCGTGATCACCGCGATCATCGAGAGGGACGCGATCACCGCGATG
GTCCCCGCGACCCCCGGGACATGCGTGAAGCTCGCGAGTTCCGTGAGCCGCGGGACCCAC
GTGATCACCGCGACAGTCGCGACTCTCGAGACTCTCGTGACCCACGGGATTCTCGCGATC
ATCGTGATGGACGTGATTATCGAGAACACCGAGATGAACGTGACAATAGAGACTATTCGT
ACCGCGATTCGGGATATAGGCCGCAAAATAAGGACCGAGACGGTTCCCGAGGCCGAGGAC
GTCCTCGAAACTAATTGTGCCAGACGGACTTGAGTAAGAGGACTGGCTTCTCCCCATAGA
CAACTAGTAGTCGCCTTATTAATTGGTAAAGCAGTTCAACAAGCGTATGTTTGGAGACGT
ACGTAAGGGGAAACAAAACATGCAAGGAAAAACGTGACTTGTGAACGTTGCGTTTTATTC
TGAACAATGTTTACATAGAATTGTTTTAAACAGTGCATTGCTAAAAAAAACTTTCAACAA
ATTTAAATATGTGCTAAATAATATTTTGTACTGAAAGAACATTTTAATGCCTAGTGGACA
GATGTTGTAATTATGCTGAAGTATGTCGTGATCGGTGACGCGTCGCGGCAAGTGAAATCG
TGGACTTTATTTTCAAATTCGTGGACTGAATCAATATAATATAGTAATTTTTATAACTAG
GTATTTCTGTGGTGAGAGGAGTTGATCCTGTCGACGAGGATTGATGTAATTGAATATTGC
AACATGAAATGGAGATCGTCTCTAGTTTTATAATAGTAACGCCTCATGCCTATATAAATA
ATGATGATAAATGACGTCATGACTTATGTGTAATTTTGTATTACAAACATTATAATCAAG
TGGGGTATGGAACTTTTGTATACATTTTTAATACCAATATATGGAAATGGATTAATTCTC
TCGTGGCATTGAATTCAGTTTTACTGTTCTGTATAATTTTATATAGTTTTAACTCTTTAA
TTATCTATGCTCATGAAAGATTTCTTTGTAATGAAAACTGACTATTACTTGCTCAGATGT
AACTTCTCAATTTTTAGATTATGTATTGTTTATTGTTGTATCGTTATTCATGTTATGTAT
ATTATTTTTAACTTTCAAACGCTCTATTTTGTAAGTAAAACTACAGTGTGACGAGAGAAA
TTTGACAATCAATGAGATGGTTATCGTGATAAATGTTAAAAAAATGCTTTTCGTTTACGT
TATTTTCCCTGCCATGATCGAAAGTGCCTTTAAATTGAGTAGAATTTTATTAAAAAAACA
TTCTAGTTTATTTTTCGGGTAGATTAGTTCTGTAGCAATTTTACTTTTATTTTATGTTGA
ATTTTTAAATAGTACTTTATTTTTGCTTGATGCATGATACAATGTAATATGTTCTTTTAA
TATTGATATTGTTTTAGATGCTTCCTTTATTATTTTTATTAATTTTTTGTAGATTTCATT
ATTTTTACACCTGGTTTATGTATTAAAGCCTA
(3212 bp)

- SilkBase 1999-2023 -