SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26673_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_ribonuclease_ZC3H12B_isoform_X2_[Plutella_xylostella]
Ontology
GO:0000932 C P-body
GO:0003674 F molecular_function
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006402 P mRNA catabolic process
GO:0016787 F hydrolase activity
GO:0030308 P negative regulation of cell growth
GO:0042130 P negative regulation of T cell proliferation
GO:0046872 F metal ion binding
GO:0061158 P 3'-UTR-mediated mRNA destabilization
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
Transcript
Level		FPKM:1.40 TPM:1.18
ORF EntryO_TrvaMG13649_complete:A_TrvaMG_comp26673_c0_seq2
Sequence
(Nucleotide)
TGAAAAAAAAATTTCGGCCATATTTGTTATTGTGAAAATTGAAATCTGTGAAATATTTAC
GAATTTTTATTTTCAATTCTGATATTTATAGAGATATTCTTTTCGAAGTAATTATTCAAA
CTATATTTTGCATTTCCCGTGCGTTTGTATTCGTCATATACCTGGTTTGTGAGTTATTTA
CAAGAAACCAAGATGGGAAAGCCATCGTCCTTAAAAAGCGTTAGTTGAAGGTTTTTATTT
ATTATTCTACGATAAAAGAGATCAAGTACATCTTGTACTCCAAAATTTTCAAAAATGGAA
GTCAAAAGATTAATGAATTTCCAAAAGAAAGTAATGAGGGCCAGACAAAACCGTAAACTG
AACCGAACCATTCAAAAAGTCTTCAAGGATCTCCGTCAAAACCGTGAGCTCCATGTCATT
TCCGAAGAGTCGATATCAGACACTACTGTCATATCACGCAACAGAAACAAATCAATAGCA
GAAAGCGATGACTTGTTGATCATTAGTGACGATGAAGACTGCTCTATAATACCATTCTCG
CCGAGCCAAAGTCTGCAATGTTCAACTCCGAAACCAAAAAGCCAATTGGATGTAAACGAC
AATTTGATTAACGCAAGGCACAAACAAGACGTTACAAAAGAAATAAATGCAGATTCGTTT
GTGACGATCGATTTGGCGGAGAGCACTCTTAATGACGAAATTATCGTTGTTGATGATACG
AACTCAACATTAGTTAGCAATACGGATACTGTTCTCGATCTCACAGAGCAAGATATACAT
AAAAAAAAATTAATAGCAAAACCTCACGACTGCGAACCTCTTATTTCATACTTAGACAAT
GTTATATTAAATCGTTCATTATCAGAGAATAGTGTTGGGAGTAATATTTATCATCCAAAT
CGGAAAACCTTCAAAAAGTCCGGATTGAGAATGATTGTGATAGACGGTAGCAATGTCGCT
GTGCAGCACAGCAGATATAAACTGTTCTCCGTTGAAGGTCTCAAAATATGCATAGATTAT
TTTCTTAATCGTGGGCATGTAGTCAAAGCATTTGTTCCAAGATTTAGGTGTAAACGTGGA
ATGAGTACGAACCCAAAACTGCTTGATGATTTGGAAAAAGTCGGTGTAGTGATATATACA
CCTTCGAGAGAGGTCAATGGGAAAATCATTACGCCTTATGATGACAGGTACATAATTCAA
TGTGCAGCAGAATTCGACGGTATTATAGTGAGCGGAGATAACTATAGAGATTTGATCAAC
GAAAATCCAACATGGCGGTTTATTATAGAGAATAGATTACTCCCTTTTACTTGGGTGGAT
GATATGATCATGTTTCCTAAAGACCCTCTAGGCAGAAATGGCCCTAATTTAGACCAATTT
TTGAGGCATGAGACCTAAAAAATGTATTTGGTATTGAATGGTTCAACTAAGTTTACTATT
GAAAAATAAAAAATTTTTGGACAAAAGTGTTACAAGCCAAAATATTTTTGTTATTAAAAG
TTTATGATGGAGTATATTTATGGCGTTTTGAGCTAAAAGGCCGAAATTTAATACGATTAG
GTAGGCAATACCTAAAAAACTTGTAAATGTCATTGGTCAAGGGTTCAACTAAGACAGTTT
ATTATTAAAAACGAAAAAAAACATTAAAAAGTGTCATAACACATAATATTTTCATTACTT
TAGTCATTGTGGTGTATATTTAATACACTTTTTGAGTATATCCACTCAACTGGGATCGGT
AA
(1742 bp)

- SilkBase 1999-2023 -