SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26666_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_mRNA-capping_enzyme_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004484 F mRNA guanylyltransferase activity
GO:0004651 F polynucleotide 5'-phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006366 P transcription by RNA polymerase II
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0006470 P protein dephosphorylation
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0008152 P metabolic process
GO:0008192 F RNA guanylyltransferase activity
GO:0016032 P viral process
GO:0016311 P dephosphorylation
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0050355 F triphosphatase activity
GO:0098507 P polynucleotide 5' dephosphorylation
Transcript
Level		FPKM:4.05 TPM:3.41
ORF EntryO_TrvaMG13636_5prime_partial:A_TrvaMG_comp26666_c0_seq3
Sequence
(Nucleotide)
TTGAAAGAGGTGCAGAAGAAAGCTCAGAAATTCTGTCATTGGAAAGGCAAAAACTTTCCC
GGGTCACAGCCCGTTTCTATGGACATGAAAAACTTGGAATTATTGAAAGAAAAACCTTAT
AGGGTCTCGTGGAAAGCGGATGGTGTGAGATTTTTAATGTTAATAGACGGCGAAGACGAA
GTGTATTTGTTAGACAGAGATAACTACGTGTTCAAGGTGCACGGTCTCAAGTTCTTACAT
AAATCAGATCTGACGCATCATCTCAAAGACACTCTGCTTGATGGGGAAATGGTAATAGAC
GTGCACAAAGGTGTCAAGACTCCCAGATATCTGTGTTATGACGTCATAGCCTTTGAGAAA
GAAGACATCGGCAGAGAACGTTTTTATCCAACAAGACTGAATTACATAACAGAAGAAATT
GTTAGCCCTAGGACGCAAGCTATGATTAAAGGTTTAATACGAAGAGATAAGGAACCGTTC
GGAGTGAGATTAAAAGAATTTTGGGAAATAACTATGTCAAGACAACTGCTCGGGGAAAAG
TTTGCAAAACAATTACTGCACGAACCAGACGGACTTATTTTTCAGCCATCAAATGAACCG
TACATAGCAGGAACTTGTCCGGACGTATTGAAATGGAAGCCAGGTGACATGAACAGTTTG
GATTTCCTTCTCAAAATACGGACTGAATCAGGCATCGGTATCGTCAAGAAGAAAACCGGC
TATTTATACGTAGGACAATTCACTGAACCCATAGGAACGATCAAATTAACGAAAGAATTA
AAAAATTACGATAACAAAATCATCGAGTGCAAGTTTGAACACAACCAATGGGTTTTCATG
AGGGAGAGGACGGACAAGTCGTTTCCTAACAGTTATACTACAGCTATGGCTGTATGGAAT
TCTATTCAACAACCTGTCACAAAAGAGATCTTATTAGACTTCATTGATAAGGATAGATTC
ATAGACAATGGATTTGAAATGTCTGCACCTCCGGCTAAAATGCAGCGTTCATCGTGAATC
ATTAGAACTATCTATTAAATGGAAATTAAAATTGTTGTAATACTTTTTCAGTTAGTATTG
ATTTCTGTTTTTATTATAAGGATGTCTTTGTTTGTAAGG
(1119 bp)

- SilkBase 1999-2023 -