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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26663_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		Plexin-A4_[Operophtera_brumata]
Ontology
GO:0002116 C semaphorin receptor complex
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008045 P motor neuron axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017154 F semaphorin receptor activity
GO:0021602 P cranial nerve morphogenesis
GO:0021610 P facial nerve morphogenesis
GO:0021612 P facial nerve structural organization
GO:0021615 P glossopharyngeal nerve morphogenesis
GO:0021636 P trigeminal nerve morphogenesis
GO:0021637 P trigeminal nerve structural organization
GO:0021644 P vagus nerve morphogenesis
GO:0021784 P postganglionic parasympathetic fiber development
GO:0021785 P branchiomotor neuron axon guidance
GO:0021793 P chemorepulsion of branchiomotor axon
GO:0021960 P anterior commissure morphogenesis
GO:0030334 P regulation of cell migration
GO:0048485 P sympathetic nervous system development
GO:0048812 P neuron projection morphogenesis
GO:0048841 P regulation of axon extension involved in axon guidance
GO:0050923 P regulation of negative chemotaxis
GO:0071526 P semaphorin-plexin signaling pathway
GO:1902287 P semaphorin-plexin signaling pathway involved in axon guidance
Transcript
Level		FPKM:28.54 TPM:24.03
ORF EntryO_TrvaMG13614_complete:A_TrvaMG_comp26663_c0_seq1
Sequence
(Nucleotide)
CCGTGATCGGATGATTTCGGTTTTGTTCGTTCAGTCACGCCTAGACTCGTTCGAAAAGCG
AATCCCAAATCATTCCGCGGCGATGTGCGAAGACTGATGCTCTTATCGTGGACTATAGTG
CAAACGTGATATTTTATTCATCAACGGGCTTTATATTAACTCGTTTAAGTTATTTTTATA
TGTATAATGTTGTGATACAAACCGTCGATTGTGGTGTTTAGTATTACGAATACGTTTACG
GGCAAATTATACAAAGATTGTGTGTGGTGCAATAAGTGTTCTCAGTTCACCCAGTCTGGA
TTTTCAAGGATTGTTTTACACAATAAAGAGATTTTTTTAAAAAGGTCTCGGTCACTTGTC
TCGTCTTGCACGCACTATGACAGTGCGTCTTACACGCCTATGATCTCAATATAGAACAGG
ATTACCACAATAAGCCCGTTGTGTCTCCAACAATGGAATTCCCATGCTCGGAGCGCGCGG
GTGGCATCGGTGATGGGCGGCGGTGCGCGCGGTAGAGTGCCGGCCACATGCGCTCGCGTC
GACATGTGGCGCGTGCTGCTGGCGTTAGCGGCCGCGTGCGTCGCCGCGCATGCCTCGCAG
GACGTCGTGCGGACCTTCAGCGATCCGGTCTCTACACCGGGCTCCCAGTTCAACCACCTC
GTCGTGGATCGCAATACGGGCCGAGTCTACATCGGCGCTGTCAATAGAATCTACCAGTTA
TCACCCGATTTGGAAGTAGCTCAGTCGATTATTACCGGCCCCGTCAACGATTCTGCTCTC
TGCACTTTTGACTGTCCAGCCAACTATGTCAAGAAGCCGACAGACAATATTAATAAGGCA
CTGGTAATTGACTACGCGACGAGTCGCCTCATAACATGCGGCTCTGTACTTCAAGGATTA
TGCTCCGTACGCAACTTAAACAATATTTCTCACGATGTTCGTGAAGTTCGTGAACCGGTA
GTAGCAAACAATGCTACGGCATCAACGGTTGCATTCATTGCACCGGGACCTCCAAATCCT
CCTATGACACAAGTCATGTACGTTGGCGTTACATTTACCGGAAATTCGCCATATCGTTCA
GAAGTTCCTACAGTTAGCAGCCGTTCGCTAGAAGATGACCGCCTATTTGGAATAGCACGT
ACGGCAGTTACGACTGGCACGAGAATGTTTGTCAATTCACTATCGCGAGAGCGGTATCCT
ATAAACTATGTTTATGGCTTTAGTTCAGAGGGATTCAGTTATTTCCTAACAACGCAACTG
CGAGGCGTAGGATCAGATACTTACTACAGTAAGTTAGTCCGTGTATGTCATGATGATGAG
AATTACTACTCATATACTGAAATCCCAATGTCTTGCACTGCACAAGGAGGAGGTAATTTT
GGATACAATCTCGTACAAGCTGCTTTTGTGGGAAAAGCCGGTTCCGTCATTGCAGGTGAA
TTGGGAATAACAGCACAACATGACGTTCTATTTGCTGCCTTCAGTCAGAGTGAGCTAATA
AATACAAATACTCCATCGGATTTGTCAGCTCTTTGCGTGTATTCCCTCAAAGCAATTCGT
CGTAAATTCATGCATAACATTAAGACATGCTTCAGCGGAAATGGATCTCGGGGACTTGAT
TTTATATCACCCTCACATGCTTGTGTCGGAACTAAATTGCAGACGATTAGTGAAGATTTT
TGTGGATTAGATGTCAATACGCCTTTGGGAGGTGAACAACCAGTAGAGGCCGTTCCCGTC
GCAGTCTTCAAGAAAAGACTTACCGCGGTAGCAGCTACAGCGACGGGAGATTATACAGTA
GTATTTGCAGGAACGGCCCAAGGACATCTTAAGAAAATAGTCGTTGAAAGTGCTACTTCC
GCATTTGAATATGGAGATATAGTAGTCGACGAAGATTCACCAGTGAATAAAGATTTATTC
TTTGATACTCAATTGATGCATTTATACGTAATGACTGAACGTAAAGTGTCTAAAGTGAAA
GTGCAAGAGTGTAGCGTTTATAAATCATGCTTAACGTGTCTCGGAGCCAAAGACCCGTAT
TGTGGATGGTGTTCTCTTGAAAACAAGTGCAGCTTACGTTCAGACTGTCAGGAAGCAGCT
AAAGATCCTCTATATTGGATCCCTTACCGCAGTGGACGTTGTACTACCATTACTCAAGTA
ACACCTAAAGAACTGCAACGAACAACAGCAAGGACACTAGATTTACTTATTGAAAACTTG
CCAACACTTAATGGACAATTTTTATGTGCATTTACAGCTTTAGATCGTACTCTTATAACT
AATGCAACTAGAAAGACTTACGGTGTTAATTGTACAACTCCGCGTACCGACACACTCCCA
CCGATACCTGCCGGTCAGCATCATTTCACTGCCAAGTTGTCGGTACGCACTACTCAGGGA
CCTGATTTTGTGGCAACTAATTTTACTTTCTTTGATTGTAATACGTACAGCTCGTGCACA
CAGTGTGTTAGTTCATCGTTTCCGTGTGACTGGTGTGTCGATGGTCATCGCTGCACCCAC
GATACCGCTGAAAATTGTCGAAATGATATTTTAGTAACGGGAGTCAGTAGAATAGGCCCC
AGCTATCGTTCTGGTCCGAGTTTTTGTCCAACAATAAATTCAACGTCCGACGGTACCAAC
GAGATATTAGTACCTTCCGGTGTTAAAAAGCAAATCAAAGTTAAAGTCCACATAATAGGC
CAATTTATCGTTCAGACAAGATTCGTTTGTCAATTCAATATAGAGGGTCGAGTCACTCAT
GTAAACGCTCAGCTTTTAGCTGATACCATATACTGTGAAGCCGTTGAATTTACTTATACG
TCACGTGCTCCTAATATTACTGCTTCATTTGCCGTTATATGGGGTGGATCGAAACCTCTC
GATAATCCGGATAATACTCACATTCTTATTTATCGCTGTAACGATATGGCTGATAACTGC
GGCATGTGTCTTGCTCTCCCTGAGAAGTTTGGATGTGGTTGGTGTCAAGGGTCTGATAGG
TGTGAAGTACAAGAGCAGTGCGGGGTTCCTAGCGTGTGGTTAAATCGTACACAAACTTGT
CCCAATCCTGAAATTCATTCGTTCAGACCTAAATTAGGGCCATGGGATGGTGGAACTAAT
ATAACCATCGAGGGAATTAATCTCGGTCGTAATATTTCGGACATTTACAACGGTGTTACT
ATTGCGGGTATAAAATGTCAACCTATTATTGAACTGTACATTAAAACCAAACAAATAGTA
TGTACTGTAGACGGTCCGGGAGAAGAGGTCCCCCGAGATGGCCCTGTAGTTGTACGTGTT
GCTGATTATCGCGATGAGTCCAAAGAACATTATACCTTCGTTAATCCTAAAATTAACTCT
ATCGAACCGATCTACGGTCCTCAGTCGGGCGGTACAAAGTTACGTATAACGGGTGAATAT
CTAAATGCCGGTAGCAATATACAGGCTTATATAGACGACTTGCCTTGCGTTATATTGTCC
GTATCGCGTGAAGAGGCTGTGTGTAGAACTAGCCATTCTTATCAACTTAAAATGGGGACA
TTGCGAATGCGTTTTGATAACGGAATGCGTACTTTAGAACGACAAAAGTTTGAATATATC
GAGGATCCTGTCGTGGTATCTGTCGAATCCGGTCCGCCGTCGTCATCACAACGTAAACAA
CCCAAAGGTATTCCCTCTGGCGGGATAAATATTAAAGTGATAGGTAGAAATTTCCATTCG
ATTCTTTTGCCTCAAATATACGTATATCATGATAATAGACCACATATTGCTCCTTGTTAT
AGAGCAGATTTCCAAACTGTACTTATTTGTGAATCACCCGGCATTGAAAGCGCTAGTCTC
AATCTAGATCCAGATAGGCCTCTAGCATTAGAGTACGGTTTTAATATGGACGATGTACAA
AGTGTACAGAATCTAACCACCAAGACTGGTGACGCTTTCCTTATGTATCCTGATCCTATT
TATGAAAAATTTGACGAAGACGTTAAGTATTATAAGTCTGATTACTTAACTATCAATGGT
CAGAATTTGGATAGGGCTTGCACTGAGGCTGACGTAGAAGTTCGTATCGGTGATAGTATT
TGCAATGTCACTTCATTGTCTCGACACCAATTGACTTGTCGTCCTCCATCGAGAGACGAT
CTTCCCGATGGTGTTGATACTCCTGAGGTAGTTGTTAAAGTGGGACGTTCTCTTACTTAT
AAAATTGGGAAACTATCATATACTTCACAGACTGGTTTGCAAGCCGCTATAGGGAAACCA
GCATTGATAGGAGTCGGAATCAGTATAGGCATTCTACTATTTATAGTCATGGGATTCTTA
GTTATGTATAGGCGAAAGTCAACAGAAAATATTAGGGTATTAAAAAGTATGCAAGAACAG
ATGGATATTTTAGAATTAAGGGTAGCTGCGGAGTGTAAGGAAGCGTTTGCGGAGTTGCAA
ACTGAGATGACAGATTTGACTGGAGACGTTACGGGTGGTATTCCGTTCCTGGATTACCGC
ACATACGCTATGAAAATTTTGTTCCCGAATATCGACGACCATGCCGTCCTGCAATGGGAA
CGTCCAGAGCTTATTAGAAAAGACAAGGGTCTCAGAATGTTTGGGCAGCTTATTATGAAT
AAAACATTCCTTTTATTATTTATTCGTACTTTAGAAAGCAATAGGTATTTTTCGATGCGT
GATCGTGTGAATGTTGCTTCGTTAATTATGGTTACTCTCCAAAGTAAAATGGAGTATTGT
ACTGATGTACTAAAGACATTATTAGCTGACTTAATCGAGAAGTGTATGGAAGGTAAAAAT
CACCCTAAATTACTGCTCAGACGAACTGAAAGTGTGGCTGAGAAGATGTTGAGTGCTTGG
TTCACTTTCTTGCTTTACAAATTCCTCCGCGAATGTGCCGGAGAACCTTTGTATCTCTTA
TTCAGGTCGATGAAAGGACAAGTCGATAAAGGACCCGTCGATGCTATTACGTCTGAGGCT
CGTTATTCACTCAGTGAAGAAAAACTTATCCGTCAATCAATAGATTTTAAACCAATGACC
GTAAACGTATCGATTTCGCAACAAACACTGTTTGTAAGCGGTTTAGAGGCTACTGCTGAA
AACGTACAAGTTAAAGTATTAGACTGTGATACAATAAGTCAAGTGAAAGATAAATGTTTG
GATTCCATATACCGCTCAACTTCGTACTCCCAACGTCCAAGTCGTGACGAACTCGATTTA
GAATGGCGCACGGGTGCCTGTGGTAGGTTGATTCTCTACGACGAGGATAGCACTACTAAA
TGTGAAGGTGAATGGCGTAAACTCAATACTCTCAATCATTACCGCGTTCCGGATGGCGCT
TGCCTTAGTCTTGTCGCAAAACAGAGTTCCGTTTACAATCTATCTAACATGGAGAAGAAC
GACAAATCTCATACTTATGAAACGTTAAATCGTGGTAAATACGGTTCTGCTAGTCCGCCT
GCAAGCCCACTGAAATACGATCACGGTGGTGGCTTTAAATACTGGCATCTCGTAAGACAT
CACGACGATGACGCGCGCAAAGAGGGTGAGCGTGGCAATAAAATGGTCTCCGAGATTTAT
CTGACTCGTCTTCTTGCCACGAAAGGCACTTTGCAAAAATTTGTCGATGATTTATTCGAG
ACCATCTTCAGTACAGCCCATCGCGGATCGGCGTTGCCTTTAGCCATAAAGTATATGTTC
GATTTCCTCGATGATCAGGCGTTACATCACGCAATATCCGACCCTGAAGTCGTACACACT
TGGAAAAGCAATTCCCTTCCTCTTCGCTTTTGGGTGAATCTGATAAAAAATCCTAATTTC
GTGTTCGATGTTCATAAGTCAAATACTGTAGATTCTTGCTTATCTGTCATCGCGCAAACT
TTCATGGATTCTTGTTCGACTTCTGATCACATTTTAGGCAAAGATTCGCCTTCGTCCAAG
CTTCTCTACGCTAAAGACATTCCGGTATATAAGGAGTGGGTGGAGCGTTACTATGCCGAC
ATTAAGTTGATGCCAGCAATATCGGACCAGGACATGAACGCGATGTTAGCGGAGGAGTCC
CGCCTCCACACGAAAGAGTTCAACACGAACTGTGCGCTGAACGAGCTGTACGCGTACGCG
GACAGATACAACGAACAGTTGACGGTGACGCTCGAGGAGGACGAGTTCTCGCAGAAGCAG
CGGCTCGCGTACCGCCTCGAGCAGGTGCACAGCCTCATGGCCCACGATTACAACGTGTGA
TCGGCGCGCCTGATGCTGTGAGGCTGTGACGCCAACCCCCACCGCCCTGTATATAACGCT
CACGCACATATCTATGCTGGCATTTATTGTATATATTAGATAGTGTACAGTCTTTAATAT
TGTAATTTTTGTATAATTTCAGCGGTCAGATCGTTTTTTAATTTTATATAAATGAACTTT
GTATTGATTTTACACGACGAGCTCGGCCGGCCACGGTCGTGCCGGAAGTATTCATATTAA
AGTAATAAATAAAATAAATTGTGTATGTCTGTCTTATGTGTGCTCGCGTCGTACGAGTTA
ATGTTACGTCGATCGGTGTATAATGTGTGTCGCAAAGAATTCGCATGTAAGCTCGCCGGC
GAGCGAGAAGGCTTCGCTCGCCAACGGGTGATTTTAAAATTTGTACTCGCAGTCTTATTA
ATGAAATAACCGACAGTGAACCCGTGAACGATTCCATTAATAAATATCGTCGAATGTAAA
AAAAAAA
(6727 bp)

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