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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26657_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		protein_sly1_homolog_[Papilio_xuthus]
Ontology
GO:0000149 F SNARE binding
GO:0000902 P cell morphogenesis
GO:0001666 P response to hypoxia
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005798 C Golgi-associated vesicle
GO:0005801 C cis-Golgi network
GO:0005886 C plasma membrane
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0006909 P phagocytosis
GO:0009636 P response to toxic substance
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0017119 C Golgi transport complex
GO:0019905 F syntaxin binding
GO:0022008 P neurogenesis
GO:0031201 C SNARE complex
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0060628 P regulation of ER to Golgi vesicle-mediated transport
Transcript
Level		FPKM:5.42 TPM:4.56
ORF EntryO_TrvaMG13602_5prime_partial:A_TrvaMG_comp26657_c0_seq1
Sequence
(Nucleotide)
TTTTGTTTATAAAATTTTCAGATGCTTTAAAACAGATGTTAAATCTAAACCAGCCACTCA
CTAAGAATATAGCCAACGAACCGACGTGGAAAATTTTAATATACGATAGAGTTGGACAGG
ATATTATTTCACCACTTGTTTCTGTTAAGGAATTGCGTGAACTAGGTGTCACCCTTCATG
TGCAACTGCACTCAGATCGTGATGCAATACCAGAAGTCCCTGCTGTCTATTTCTGTTCAC
CAACAGATGAAAATCTTGACCGTATATGTCAGGATCTTGATAATGGAATTTACGATCAGT
ACCATCTAAACTTTATTTCCCCAATAACAAGGCATAAACTTGAAGATCTAGCTGCATCGG
CAATACAATCAAATTCAGCTGTTAATATACATAAAGTATTTGATCAGTATTTGAACTTCA
TTTGTTTAGAAGATGATCTCTTTATCATGAAGCACCAGCAGTCTGACTCACTCTCTTATT
ATGCTATTAACAAAGGTGATACAAAAGATACTGAAATGGAAATGATTATGGACAACATTG
TTGAAAGTTTATTTTCTGTCTTTGTGACAATGGGAAATGTACCAATTATAAGAAGTACGA
AGGGTAATGCTGCTGAAATGGTAGCTAAGAAACTTGACAAGAAATTAAGAGAAAATCTTT
GGGATGCCCGAAACAATTTATTTCATGGTAACACTGGACAAGGAGGTGCATTTAGCTTTA
CGAGACCTATGCTGATACTTCTCGACAGAAATATTGATATGGCAACACCATTGCATCACA
CATGGACATACCAAGCTTTAGCCCATGATGTATTGGATTTATCATTGAACAGAGCAGTTG
TTCCGGAAAACATAAATGCTACAGTTCCAGTACAGAAATCAAATACAAGAGTGTGCGATC
TTGACTCCAAGGATCCACTATGGTCGGAGCATAAAAGTAGCCCGTTCCCGACTGTTGCAG
AAGCTATACAGGAAGATTTAGACAAATACAGGAGTTCTGAAGCAGAAGTAAAGAAACTTA
AAAGTTCAATGGGTCTTGATGCCGAAAGTGATTTGGCTTTAAGCTTGGTGAGTGATAACA
CTCAAAGACTTACAAACGCAGTAAACTCATTGCCGCAACTAATGGAAAAGAAACGACTGA
TTGATATGCATACTACCATTGCTACAGCAATTCTTAATGCCATAAAATCCCGAAGACTAG
ATTCATTTTTTGAATTAGAAGAAAAAATTATGAGCAAAAGCACTGCAGTTGAAAGTAAGG
CTGTTATGGATCTTCTAATAGATCCTAGTGCTGGGACACCCGAGGATAAAATGAGACTGT
TTATCATTTATTATCTTTGCACATCACAACTTACTGATGATGAATACAAGAGGTTTGAAG
GAGCTCTCTTACAAGCCAACTGTGATGTAAAACCCTTGTCTTATATGAAACGGTGGAAAG
GTTTCACAAAAATGTCAAATCAATATGAAGGTGGTGGTACCAAAACAGTATCTATGTTCT
CGAAACTTGTATCTCAAGGATCATCGTTTGTTATGGAGGGCGTCAAGAATTTAGTTGTTA
AGAAACACAAGTTGCCAGTCAGTCGTACAGTGGAAAGTGCTCTAAGTGGCGCTGAGGGTA
ACTCTGAGTTAACGTGGTTGGATCCTCGCGCGGCCCGCACCGACGCGGCGGGCAGAGCGC
GCGCGGCCCGACAGCAGCCGCCTACTGACGCCGTGGTGTTCCTGGTCGGGGGAGGGAACT
ACATCGAGTATCATAACCTTATCGACTTTGCTAAGCAACAAGCAGCAAACGGTATACCCA
GAAAACTCATCTACGGCGCTACGACTTTACCAAACGCATCTCAATTTTTAAAACAGCTGT
CGCTACTCGGAGAAGAGATTCAATGAACATTCCTGATTTAATTCCAATGTAAAATATATA
ATTAAGTTAATAAATTATATTATTGTGCACTATTTAATCATGATCGGGTAGTTGGGACAA
TGAAACAAAACTCTCAACAAGTTGGCTTTTTATTTACAATGACATTGAAAATATAGCTAA
CATCTAGTAGTCTACTAATAAATTTTGATTGTTTTAAACAAGAAGTATAAAATCTAAATC
ACAAGATAGTTTTCTCA
(2117 bp)

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