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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26654_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cleavage_and_polyadenylation_specificity_factor_subunit_CG7185_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005849 C mRNA cleavage factor complex
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
Transcript
Level		FPKM:6.22 TPM:5.24
ORF EntryO_TrvaMG13592_5prime_partial:A_TrvaMG_comp26654_c0_seq1
Sequence
(Nucleotide)
GCCGCATCCGGAGTGGGCCGCCCGCCCGCCGCATCCCATGTCGCAGCCCGCGCCGCAGTA
CGGACCGCCGCACCACGGAATACCGCATCAGATGCCGCCGCCACACCCTCAACCCGGCGG
CGGAGGCATGCCGGCGCCGCATCAGCTACCACCGCATCAACCGCCGCGAGGACCGGCTCC
TATGCCACAACACCCTGTGATGCCTGGAGCACCGGCTCCACATGTGAACCCAGCTTTCTT
CAGTCAACAACCACCGACGCAGCCGCCGCCCATGCAAGCACCACAGCCGGGACCACCAGG
TCCTGGGGCTCCATACGGTCATCCAGCTCACGGGGCGCCGCCCCCTACGCAGGGACCTCC
GCCCGGGGCTAGGCAGCCTTATGGACGACCGCCACAGAGCTACCCCCCTCAAGCGGAGGC
AGCCCGCCCCCCGCACCACCCCGCGCCGCTGGTCCCGCAGCACGCGGCGCTGCCCCCGCC
CATGCCGGCCATCAGCGAGGCGGAGTTCGAGGAGGTGATGAGTCGCAACCGCACCGTGTC
GTCCAGCGCCATAGCGCGCGCCGTCAGCGACGCTGCTGCCGGGGAGTACGCGTCGGCCAT
AGAGACGCTCGTTACTGCTATATCGCTTATTAAACAGAGCAAAGTTGCCCAAGACGACCG
CTGCAAGATCCTAATATCATCTCTACAAGACACACTCCACGGCGTCGAGACCAAGTCCTA
CAGCAGCGGAGAGAGGTCGCGCCGATCCAGGTCACGTGACCGCGACGGAAGGCATCACCG
CGCGCCCAGGAGGAGGGACCGCTCCACCAGCAGGTACCGGGACAGGAGCCGCGACAGAGA
TGATAGGGACAGATACTACAGGGATTATCGTGAAAGAGAACGTGACAGGTCTCGTTCGAG
GGACCGCGACCGCACCGACCATTACAACAGGGGACACAGTCGGGAAGAAAGGGCTCGTAA
ATCACCAACGGAGGCCGCAGCAGAGGGCAGCACCACCGAGCCCAGCTCTAAGAGTCGCAC
CGGCACCGCCTACTACGACGAGCGGTATCGAGAGCGCCGGGACCGCGACCCGCCGCCCGC
TGACAGAGATCGCGACCGGGAACATCGGAGGGACGCCAGGCATTAACACGAGGCTTCAAC
GGGATAAGAACATATAGACTAACATGAAGGTTTTAGTATGACAACGCTTATGTTTTGACG
GGTCGTGAAACTTGTGAAACATTGCGTAAATAATACATTAGCCAATAGCACAATATTGAA
CATTATTTTTGTATAGGTGGAAATGGCCAGGTTTCCATCTGCCTCGAATGTTGAAGTCGA
GTTCCACTAAAACTTGCTACCTCACACAGAAGCCAGCACGGAATGGTCCGTAAGGCTTAC
GTGAACCCCAAAATATTCGCTTAGTAATAGTTTGATAAATTCGTTGGCCAAACTTAAGGT
AAATGATGAAAAACACAATCTGGAAAACACCGCTGTACATAAAATTTGAGCGACAATAAA
CGTAAAGTTTGCTAGTTGTTCGATATATGTCTTCTGCAGTTTTTTAATGGTGTGTGCAAT
AAAGTAAAAAATAAAAATTTGTCAAACAATTTGATTGTTTACGCCACTTTACGCGATGCC
CGTCAGGTTATGGCCCGTTACGACCCGTCTAAATGTGCGTTGGTTCATACAGAATGTATT
AAATAGAGCGATGCCTGGTGGATAATGCCTGCCGTATAAATGTGTGCGCTCATTTATTTA
ATAGAAGGTCGTTGTAAAAGTTGTCTCGATGCTAAAATATAATATTAAGTAAGCCAAAAT
ACTGTGAATAGCAGATGTTCTACAGTAAAACTCGTTAATCCTAATTTTTCTCAGTTAATT
AACTTGAAAAATTATATATTTCTGTCTATCATGGAGTACCATTATCTAGAAATGCTGAAT
TTTTTGGCATATTAACTGTTTTACCAAAATAACATCAAAAATATCACGGTGATCAGATAT
CAGGCAATACTCGTTAATATTATACCCATAAAATTTAAAAATTTATAATCAAAATCACAT
ATTAATTTTAGAGGCAACTTTTACACCGACATCTTTGTGAAACAATCATTGACTGTACAA
AGAGGTTTGAAAACAATAGCATGTGTGATTAAATAAACTAATTTGTAAACTATGAAGAGT
AAATATTATTTTATAAAGCTTTATGTTCTAGAGCGCTTAACTGAAATAAACATTTTGAAT
TTTAGCAATTCAATTTCTCTTTAGAAAATTAATAATTTGCATTTAGTAACAATTTTTGTA
GAAATTCCCAGTATAATTCTAATTTCGGAGGCAACCAATATTAAAATTGCATCGTGCAAG
TAATTATGCTATTTACCCTAATTGGTCTCTGTTTTAAGTAGCTAGCTGAATTTAAGATTT
TTTAATTTAGAAATTTATTATTACACGTTGCCTTTTCTCATAAATGTAAATCTATATTAA
TTGAACTACGCATGTTTCAAATTATAAAGGTAGGGTAAAGTGCCCCATTCACTTGGCAAC
GAATGACCAACAAACAACAAAATAAAGTACGAAGTCTATTTTAATATTTAAAAAACCTTT
GTATTTTCATATTATTCATTCTTAAATTAGAGATAAAATTCATTTTAATAATACAATACT
ATGAATTAGAAATCGCTGTAAAGAAGCGCATTACATCCACGTTTTTATATGAAAATGTGA
TTGGTTGCGTTGCCGCCCACTTAAATGTGCTCCTGAAAATACAGGGTGATTTTTTTTATG
ATAGTACATATTGATGGTCATATACGACCAGTAACGATTAATGTAACCAAAGAATATGGC
ATTACTTAGTGAACTCCACTTAAATATATCCAAAATTTGTGAAAGCTATTGTCGCTTGAC
AGCTGATGGCTGGGGTGTGAGGTAAGCGAAGTAACGCGGGATTGTTTGGACAATCTGACG
TGGGGTAAATGACCTGTTGAAATAAAACTT
(2970 bp)

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