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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26646_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cullin-4A_[Amyelois_transitella]
Ontology
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016567 P protein ubiquitination
GO:0031175 P neuron projection development
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031465 C Cul4B-RING E3 ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0035518 P histone H2A monoubiquitination
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045732 P positive regulation of protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0070062 C extracellular exosome
GO:0070914 P UV-damage excision repair
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
Transcript
Level		FPKM:10.71 TPM:9.01
ORF EntryO_TrvaMG13552_complete:A_TrvaMG_comp26646_c0_seq1
Sequence
(Nucleotide)
CGTCAAAAATAAATCGTAATGGTGGTGAATCTGTAAACTATCGACTGACTGCAAGAATTT
TATTTGTTTTCTAGTTTAAATCTTGTTTAAAGTTCATTGATTAAGTGTAGTGGCCACGGC
CATATCATGCTCTCTTATGTCGGGTTTAACTGAGTCTCCTGTTTCTGCCAAAGAAGGCGG
TAATCTTCATAAAAAACGTTCACTGCCCGTCAGCAGCGATTCGTGTAGCAAAAGATTAAA
AACCACCGAGATGAGCGCAGAAGAGAAAATATCAAATTTCTCGCTAGTTAATCCAAATTC
TAACGGTATAAAGATTTCGTCAACGTCCATGAACAAGCCCGGAGCGACTGCAAAAAAGCT
TATAATCAAGAATTTCAAAAGTAAACCGAACCTTCCAGATAACTACCAGGAAACGACATG
GAGCAAGTTACGAGAAGCCGTGGTCGCCATCCAGACCTCCAAATCTATAGCTTACTCCTT
AGAGGAATTATATCAGGCCGTCGAAAACATGTGTAGTCATAAGATGGCCTCACAACTTTA
TGTAAATTTAACTAATTTAGTAGAAGCTCACGTAAAAGCGAATATAGATCAGTTTTTGTC
TGAGAGTATGGATCGTCAAATATTTCTTAAGAGAATGGATGACTGCTGGCGTACTCACTG
TCGACAGATGATTATGATTAGAAGCATATTTTTATATTTAGATCGTACTTATGTTCTACA
AAATCCTAGTATACATTCAATTTGGGACATGGGTCTCGACCTATTCCGCCATCACATAGC
AATGAATACTCTCGTTCAGACGCGGACAGTAGACGGTCTACTACTGCTCATTGAACGGGA
ACGAGGGGGAGATTCTATAGACATATCGCTGCTCAAGAGTCTGCTACGAATGCTCTCGGA
TTTACAGATATATCAAGAAGCATTTGAGCATAAATTCCTCCAAGCAACGGAACGGTTGTA
CGCCGCTGAAGGACAACGTTTAGTAAGAGAACTAGCTGTTCCCGAGTACCTAGCACATGT
TGAGAAAAGACTAAAAGAAGAAAATGACCGCCTTGTGCATTATCTGGACCCATCTACCAA
GCTACAACTAATAGTAGTAGTGGAACGTCAGCTGCTCGGTGAACATGTTGGTGGTATCCT
GGGCAAGGGCCTGGCAGCGCTGTTAGACGCACCCCGGCTGCACGACCTCGCCACACTCTA
CAACCTGTTGTCCAGGGTCAAGGATGGACTCACGGAGCTGTGTCATCACTTCAACCAGTA
TATAAAGAAAAAAGGAAGGACAATAGTAATAGAGCCAGAACGAGACAAGACCATGGTCAG
TGAACTGCTCGAGTTTAAGGAACAATTAGACCACATCGTCAACACTTGCTTTCAGAGAAA
TGATAAGTTTATATACTCGATGCGGGAAGCGTTTGAATATTTTATTAATCAGAGACAGAA
CAAGCCTGCTGAGTTGATTGCCAAATTCGTCGACGTAAAATTAAGAGCGGGCAACAAGGA
GGCAACGGAAGAGGAATTAGAGAGACTTTTAGACAAAATAATGGTTTTATTCAGATTTAT
ACACGGTAAAGATGTGTTTGAAGCGTTCTACAAAAAGGATTTAGCAAAGAGATTATTAGT
AGGTAAATCAGCATCCGTCGACGCAGAGAAATCAATGCTCAGTAAACTTAAACAAGAGTG
CGGAGGCGGGTTCACTTGCAAACTAGAGGGCATGTTCAAAGACATGGAGCTATCTAAGGA
CATTAATATCACTTATAAACAGCACCTATCAGCGAGTTCAGAAAACAGTGGTCCGGGCAA
CGTTGAGTTATCTGTCCACATATTGACCATGGGTTTTTGGCCCACATACCGGGCCTGCGA
AGTGAGGTTGCCCGGCGAACTGACCAGACAACAGGAGCACTTCACGAAGTTCTACCTCGC
TAAACATTCTGGAAGGAAACTGAACTGGCAACCAACGCTGGGACATTGCGTGCTTAGGGC
ACATTTTGGACAGGGTAATAAAGAACTTCAAGTATCATTGTTTCAAGCGCTCGTTCTTTT
ACTGTTTAACGACGGAGACAATCTCTCATTTGAAGACATCAAAGTTGCAACTAATATAGA
GGAAGGAGAGCTCCGTCGCACGCTGCAGTCGCTGGCGTGCGGCAAGGCGCGCGTCCTCAG
CAAGACGCCCAAGGGACGAGACGTGCAGGACCACGACCACTTCGCATTCAACGCAGACTT
CACCAACAAACTGTTCCGCATCAAGATCAACCAGATACAGATGAAGGAGACGAGCGAGGA
GCAGAAGGCGACGGAAGAGCGCGTGTTCCAGGACCGACAGTACCAGATCGACGCGGCCAT
CGTCAGGGTCATGAAGATGAGGAAGGCGCTCTCACACAACCTGCTCATATCTGAACTGTA
TAACCAACTTAAGTTCCCTGTCAAGCCATCGGACCTCAAGAAACGCATCGAATCCCTCAT
CGATCGCGATTACATGGAACGCGATAAAAACATCCCCAACCAGTACAACTACGTCGCGTA
ACACATCCCCGACCCTCACTAGCTACATTATACACTATACAGGGTGTCGCAAAACTATAC
AGGGTGGATCTGTTATTTTGGACCGTCTGATCTGGGGTGAATGATCCACCCTTTATGTTA
AGGAAATAATTGCTAAAAGTCCGTTTATGTAGGTCTTAGTAACGTTGCAAAGGTCCATGA
GCGGTAACTACTTAAGATCAGGCAGTTAGTTAATTTGCAAGAAAAATAACTTGTGAATAG
GCTGGTTTGATAGCAAAAATGTATAGAGATTTCGTGACAGAAAAAAGCAAAAGAAAATCA
GTGATGTTTTTTTTCACTTTAGTCTCTACAAAGTTGTAGTGTTTAAAAATGTACATTTTC
TCACTTTTTTATAGTAAATTAAATGACGACTAATCACTTTTGGCTCTTAACCACTCAACT
GGGATCGTGAACCAAATTGGTTTGTTTACTTT
(2972 bp)

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