SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26643_c0_seq7
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_spinster_isoform_X2_[Amyelois_transitella]
Ontology
GO:0003376 P sphingosine-1-phosphate receptor signaling pathway
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0007040 P lysosome organization
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007619 P courtship behavior
GO:0008333 P endosome to lysosome transport
GO:0008347 P glial cell migration
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0009267 P cellular response to starvation
GO:0010001 P glial cell differentiation
GO:0012501 P programmed cell death
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
GO:0031902 C late endosome membrane
GO:0031982 C vesicle
GO:0035193 P larval central nervous system remodeling
GO:0040011 P locomotion
GO:0043067 P regulation of programmed cell death
GO:0045476 P nurse cell apoptotic process
GO:0045477 P regulation of nurse cell apoptotic process
GO:0045924 P regulation of female receptivity
GO:0046624 F sphingolipid transporter activity
GO:0048477 P oogenesis
GO:0048488 P synaptic vesicle endocytosis
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0055085 P transmembrane transport
GO:0090099 P negative regulation of BMP signaling pathway
Transcript
Level		FPKM:0.63 TPM:0.53
ORF EntryO_TrvaMG13544_complete:A_TrvaMG_comp26643_c0_seq7
Sequence
(Nucleotide)
AAAATACTTTCTTTTTATTTCAATTCAATGATGAAGCTATATGCCGTATGTACAACAAAC
TTGTTTAAGTAGATAATAATTTAGATGTACATAAAATTAATTCAGTCTTATTAAATTCTG
TACAGTTTAATCTAACATGTTACTAATATTATCATAAACTATAACGAACATACAATACTT
TAATTCGTAAACATCACTCCTTTTTATTGACGATAAAAGGTGGGGCGTTACATTGTTTAG
TTAAGCTACACCTATTAGAGGCGGTGCTTTTATAATTTAGGAACCGAATGATAACCGTTA
GTTAAACCGTAAGAATGTCCATATCCAGCACTGAACCTAATTAAATATTAAAACGCTCAA
CCGCGACGAATGCCATTAAATATTGCGATCTATGAATAATGTAATAAATAAATAACAATG
AACTCTAGTACAATAAGTTATAGGAATATTCGAGACAGTACTCAACAATAACAGCCATAA
TTTAACTATGAATGTATCGATTTTAAAATGAATACATCTATAAATATATCCAACTACGTG
TTCTTGATAGGCACAATTTGTTTTAAATCTAATTAAGGTATAGGATCGACCGATTTTACA
CTAATTTTATATAAAATTTTACCACACAAAACATTTATACCAACACATTATAATCAATCC
CGCCATTGTTCAGCAATAAATATGCTTAACAAATCAGTCTTCTTAATGTTGGGACAGTGA
AGCAACCACGTCTTTATTGTTACAGTTTTACTATCATTCAAATACTAGATCCGTATCACT
TCAAAAATACTTTGTATTTATGTTAAATCCGAATAAAGGCGTGATTACTTAACTGAAACA
GACAAGGCTCTCCTTTTGTGAAAGTCGAAAATTCTTTCACTATTTATGACCGACTTTTAA
ATATACTATTTTATTCTCCGGCTATGATTTCTTCGTGTGCTGAACTGTGGGATGGCTCAG
CGCGCGTTTCCGCTTCTAAATCTTAAACGATTTTTGAAGTTGCTGCAATAGCTCTGTCTA
CTTTTTGTTTATCTTTAACTATGTAAGCCGACGTTATTAAAAAGAATATTCCTCCGAGTA
CTTCCACGAAGCAAGTTATAAAGAGCGCGTACTGAAGTGCTCTAAATTGAACAGTCTTAC
TGGGCGGCAGGTCGTCAGGCGCCAAATATGATTGTAAACTCTCTGATATAACTCCGATTA
AATACGGACTTCCAGCGTCGCCGAACATATGCGATATTAATATTTGAAAAGCTTCCGCCG
TCGAACGTCTTGGAGGAATTACAACGTACAGGATGATGTCGGCCACGACGGACCACGTGA
GGTTGAGGACGAGCATGCCCAGGAAGATGAAGAGGAAGGCGGCGGCGACGGTGGAGCGCA
CGGCCGCCAGCGCGCCGTACACCAGCGGCGACGACAGCAGCAGTGCCGCGCCGCACAGCA
GCGGGTCCGCGTCGAGCAGCAAGGGCCGCAGCCGAGCCGCCGCCGCCGCGCCCAACGGGA
CGCCCAGCGCCCCCGCCGCCATGCTCACCAACCCGAACTTGTACGACACGCTGCTCGACC
ACACAACACGCGCCGTCTCATACAACCTCATACTGACTCGTCTCGCCATTAACACTACCA
CCTAACCTTACATTCCTCAACTACTTATCAGATCTGATAGTTTTATGTACAGACACATAC
ATAAATAATGAAATTCTTATAATTTTTGTGTTATTTGACAAAGATAATCACTGAAATCAA
GCGCTATAAATTTGTTTCTTTCGGTTTTTATGTATAAAATGTTTTATTTACATCAATTAA
ATGAGTCCATAATTTTCTCTGCTAAAAGTTCCAGTTTGCTGAATCATTACTTTCCTAATT
TGTTATACCCTACTGAGTGATTAAGTGATGTGATGTGAAATTGTAATTATATTAAATACA
TACGATTCTTCTGTGAAGGTGTTGCCCGGTTGCAGGTCGAAGCCCGAGAATATGAACTTG
GGTCCCCACCAGGTGAGCGCGCCCGTCACGAACGCCACACATGTAAACGCGATCGTCGAC
AACATGAACGAGGGATTCTTTACGAGAGAACGAATGTCATCCTTATAAGATGTGGGTTTT
ATATGACTATCTTCTGATGCGCCTCGTTCGGGATCTTCCATCGCCCACAGGATGAGGGCT
ACAGCGACCGCTCCAAAGAAAGGAGTCACACGTAATCCATACCGCCAATTATCCAGAGCC
CCACCTACCAACGACCCCACTATGTATCCGAGACCACTTCCGACCGGGATCGCGAAATAG
AAGAACGCTAACATCTTCGATCGTACATCTCCCACGAAGAGGTCACTGATAATGGTGGGA
GCTATGGTGGAGTATGAGGCCTCTCCGATACCAACGAGGCCGCGAAAAAAGGCGAAAGAC
TCGTAGTTGGGTAAGAAAGACCCGACGAATGTTGTTACACTCCAGAAAGCAACGCCACCC
GCCATGATGGTTCGTCTGGAGTACCTGTCGCCCAAATAACCGAATATCGGAGCGAACAAC
ATGTAGGCCACAACGAACACAGTCTGCAAGAATCCAGCCTTGCCATCTCCAATGTTGAAT
TCTTTTTGGACCTTATCTAAAACACCGGCGATGGTCAATCTGTCCATGTAGTTGATGAGG
TTAACGAAGCACAATACACAGACAGTCATGTATTGCGAGAAGGTCACGTCCCTTAAGCTT
GTATGTCTTCTCGCCTGTTTCTCCTGAAGAAGGGCCGTTGCTGATTCATTATCACCGTTT
ATCACTAACTGCTGGTTTGAAGTGTTCGGTGTGATGCCACTGGGGTCCATGATTCCTGAA
CTATTTTAATTTTAACTCGTCGGAACTCTACGAGAAAGCTACTTTCAGATATCTTAAATC
ACAACAGTTAAAAAAACCAACAATTTAAAAAATCGGATTAACTTAAAATATGTGCTACAA
ATGGAATCTATTTTTACATTACACCCTGAATAAATAATTGATCTTTCAATATTTTTTTTG
CATGATAATTTTTGACGATACACTGACCCGCAGTACACAAACGCCTGTCAAAAAGCGACT
GCCGAAATCCGAAATTGTGCAGTCGTTTGGTTGAAG
(3096 bp)

- SilkBase 1999-2023 -