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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26641_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pre-rRNA_processing_protein_FTSJ3_[Papilio_xuthus]
Ontology
GO:0000453 P enzyme-directed rRNA 2'-O-methylation
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0001510 P RNA methylation
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0008649 F rRNA methyltransferase activity
GO:0008650 F rRNA (uridine-2'-O-)-methyltransferase activity
GO:0016435 F rRNA (guanine) methyltransferase activity
GO:0016740 F transferase activity
GO:0030687 C preribosome, large subunit precursor
GO:0030688 C preribosome, small subunit precursor
GO:0031167 P rRNA methylation
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
Transcript
Level		FPKM:11.04 TPM:9.30
ORF EntryO_TrvaMG13515_complete:A_TrvaMG_comp26641_c0_seq1
Sequence
(Nucleotide)
TTTTTTTAAAACATGTAAAATTTATTACATTTATTAGTTTTACAATAATTATTACAACGG
AACTTATGATCATTTAGCTTTGCCTTTCTTTTTCGGTGCCTTTTTAGGTTTGTTTTGTTT
AGTTTTAGGCTGCTTCTTGCCACGACCTTTCGTTTTCTCCTTGGCCTTTTGGGCGCGTAA
GTCCTTCTTCATCCGTGGATCAACCACCCTGTACTGACCTTTAACGCCTTGTGGTCTCTT
CATTCGTTTAGCTGTCGTGTGTTTCTTGGCTACGACATAGGTGACTTTCTTTTTGCCGTC
AGTCTGCGCTTTCTTGTATAGTTGCCTGACTTGCTGGGCTTTCTCTCGTTCAGACATGTC
GGCGTTCTCCATGACGGCCTCGACCTTCTTCTTGGCGCGTTCCATTTTTTTGATCATGCG
CTTCTTCTTACGTGCTTTTGCTTCTATCACCTTTTTGATGGGTCTAACGTTGATTTCTTG
TAATCTGTTCTTGTATTCATCGGTGTATTTCTCCGGTATTACAATATCTTTCTTCATGTG
TTTCTTTTCATCTTCTACAAACCAATCGGGTAGATTTTTATCATTAAATGTGTATCTATT
CCAGGCGTCATCAATCAAATCTCTTTTAAATTTCTTAGATGTGGCTATCATTGTTCCCAA
AGCAAGCGTTTCTGCGTCCATTTTTAAACTTTTCTTTAATTTTTTCAACTCTGGATCTTG
AGAAACAACTTCGAACCCATCCTTGTTTTTAGCTCCAGCCGCAGACTTGTTTGGAGCTGC
GTTTTCTTCAACGTCATAATCACTGTCAGAGGAATCGTCGTCGGAACTCTCACTGTCTGA
CAATTTCCTTTTAGATGCACTTATTCTTGTTGTCGATTCTATATCTTCTACTACTTTTTT
TCCTTTTTCCTTAAATGTTTCAGCCAATTTGTCTAAATCTACACCCTCATCAGCTTCTTC
ATCAATATCTTTAAAGCAATCTTTTTCAAACCAGAGTTGTGCCTTCATTGTTCTTTTTGA
CACTGGATCAGTGTTATCAAGGTCTGTTAGCAATGGATTGTCCTTTGGAATAGGCTGAGT
TCTATTAATTTTACTTGCTTCTTGACTCACTTGACTGTTTTTTAATGTATTCAACTTCGT
TAATTTAGCGATTTTTTTCGTTTCATCCTCAGAGTCTGAGAAAGCTAAAGATTCTTTTTC
TTTTTCTGAATCCGAATCAGACTCCATTTCTAGTTCACTGTCAGAATCTTTGTAGTAGAG
TCCAGAGGAATCCAATTTGGAATCTTCAACATCATACTTCATATACTTCGGTTTTAATTT
CATGTCATCGTCTGAGAGATCATCTCTCTCTGCCACTATGTCAGGTTGTTGATCTATAAG
TTTATTTAATTCTTCTGCATTTTTGATATCAGATAATTTAAACATATCATTGCTTTCCAA
AATAGGTCCATCATCCCCTTTCAGTACCATCTTGAGATTCATTTTCTCAGCTAGTTTTTG
TCTCTGCTTGTTGAGCTGTTTCCTTTTCCGTTTAAGTTGCCTTTTTTCTTCATCCTGTAA
TTCTGCAATTTGTGTGTCAACATCAGCTTCAGTGTCAGCATCCTCATTGTCATTACCATC
CTTTGCTTCTTCCTCATCTTTTGGTTCATCCTCTTTTTTCTCCTTAGATGCTTTGTATTC
TTTCATTTGTTTAAACCATGATAATAAAGCTTTTAAATCTTTTCTTCCAAGAACTTTGAT
GTCTTTGCAGCATTCTTTAATTTCTGGAGTTGTCTTAGGATGAGCCTCTATCTCCTTGTC
ATCAAATACAATCTCAGAACATCCTTGAAGCAAATCTACTGGATCATCTTTACCAAGAAA
TTCAGAGAGCATTACTTTATGATGAGTTGTATAATCATTTTCTTTATATCCCTCTGCTTT
TGCTTTCTTTTGTTTTTCAGGGTGTAATATATTCATGTGTTGCTTTTTCACTATATCCAA
ATCTTCAAACACATGTTTTGGGTCAAGGAATTTAGGATCTATAGTATCAGGAGCAATGTA
GCCCTGGCACACAACAAAAATTTCAGAAGACTCATTACGAGATGCCTGAGGTTTTGTAGC
ATGAACTTTCTTAAAGAATTGTTTCAAGACCCATAAAAGTGCATGATAGTCCTTGGATCT
GAATACTTTGGTCACAAACCAACCACCCTCTCTGAGAAAATGTGTAGATAGTTTTAAAGC
ACTCAGTGTGAGACAAGCTTGTTGATAAGCATCATGGATCCAATTTAGACCAACATTTGG
TGCTCCGTCGTGAAGTACTACATCAGCCTTCCAAGTTTTTATTTCTTTTTTAATGGCTGT
TTTACATTTTTCAGTAGTAATATCTTCTGTCAATCCTATACAGCCAGGCACAGGTTTTAT
AGGAAACAAATCTACTCCAATAACAACACTGGACACTGGCATGTTTTGGTGGGCGACTTG
CATCCACCCACCAGGTGCAGCACACAGATCTATGCATACTCGCGACTTTTGCAGGAATCC
AAATTTCCTGTTCAATTGTATTAATTTGAAAGCAGCTCTTGACCTGTATCCTGTTTCTTT
GGCTAGCTGATAGTATTTATCTTTTCGCTGCTTTCCTACTTTTGTTTTTTTCCCCATTGT
GTCAAATTCTATTTACCATTTCAAAAAAATAGTAGTGATATAACTAAAATAACAATATTT
CAGTGTTCCAATTGATTTGCTGTGCTTTCATTGCCTAAATTGAGGTTATTTTAGTCATGT
TTACACTTTTT
(2771 bp)

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