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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26639_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cullin-associated_NEDD8-dissociated_protein_1_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0010265 P SCF complex assembly
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0017025 F TBP-class protein binding
GO:0030154 P cell differentiation
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0043086 P negative regulation of catalytic activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045899 P positive regulation of RNA polymerase II transcription preinitiation complex assembly
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:11.67 TPM:9.82
ORF EntryO_TrvaMG13510_5prime_partial:A_TrvaMG_comp26639_c0_seq2
Sequence
(Nucleotide)
AAAGAACTTAGTTTAAAAAATATTTTAGTTCCGATAGCTCTCAATGTATAGCTATATAAC
TTCTACAGTACATAATGAAAATTTTAAACAACTATGTGACACTAGTTATTATTTCAAGAA
AAATGTTAAAGTCCTTTATAATAGCAAGCATGAAACTTTGAGCAAGTATCTTTAATAAAA
AATATTAACGTAAATAATACAAACAAAATAAATACAACACATTTTACTTGTCAACGAATT
TCCATTTACAAGCTAATTTTTCATAATCATACAATTTTTAAAACAAATGCAAATTCGATA
GTTATACAAATTGTATATCCATTGCGTCACAATATTATTTAGTGACGTATTATTCCTCGA
GTCTTTAGTCCCTAATAAGTAATGAGCATTGAGATTATGTTGTGCTTATAGTAAGTTCCA
TTTAAAACCTAGCAGTGTTTAGATATTTTCATGTAATTTCGTAATAAATCTGTTGAATCA
ACCGATGTTTCTTTTACACGAAATTTTCGAATGACGCTATTTATAAACATAATCATACTT
CAAGCCGAAAATATGACAAAACCTAAACACCAAATAAATGCCAAATTTTAAAATACAATG
CTTATTAAGTATGGTACTTGAGAAAAGCATCTGTATTGTACTATGCGTTATCAGGAAGAC
TCGTAAAATATTTGACATATTGAAGGACTTTATAGTTTTTGACCACATTCTAATAAAATG
CTTTATTTAGAAAATATTATTTAACTAGCGTCGTTGAAAAGACTCTAAAAGCAAGGTGCG
CAAGATCATGCAATGGGAAGTTATTTTATCGAATCAATCGATCCAATTTAAGTTCCGATT
TGCTACACTACATGCCAGTACTAAAATATTCAGTACTAGCATGTAGTACTCAACACCTTT
CTTTAATTTGTCCTATCTTTTACCAGTCGACCTGTAGATTAGAGTTCAGACAGTAAATAC
ATTAATTTAGCAGTTTAGTCAATCGAAATGAACATCACGTAGTTTATCAGCTAAGTTCTC
ATTGGCGTTGGAGGTAAAGCCTCTTTGTGATATCTGTTGGTTGGTTGGCTAGCTCTGATC
CATGAGGTTTGAATCCATACCGGCCGACCCACTAGAATCCTTTAGGATCGACTCAAAGAT
GGGCTGTAATTCTGGCAGCGATCTAATCTGAGTCACGAAATCCATTAGGTGTGGATTTTT
ATCTGCTTCCGGTATCTGCATTAACGCGGCAGTAGCGCGGAGTGCAGAACGTTTTAACTC
ATCTTGTTTCTCGTACTCTTGTTTCACAGAATTTGCTTTTACTTTCATTGTACATGTTGC
TTTTAGTGGTTCTACTAAACTTTCTAATCTTTGTAAGACAACAGCAGGGCACAACTGAGC
TAAACGCGCGCACATTAGGTAAGTCAGCATTTTGATATCGTAGTGGTCGCGGAGGCCGTC
CTCCACGTGGCGCAGGAACTCGAACACATCCAGTCGATCGAGGCAGGAGCCCAGCAACGT
GTACATACACTCGAACGCAGCTTTGCGGAGATCGAGACCGTCGTCCACTGAATGTTTGAA
CGGACCCATCTCTACTTCACGGATCAATTCTTTCTTGACTTTAGTCTCCGCGTAGATGGT
AGGCAGCACGCGCGGCAGCAGGTCCCGCACGAGGCTGGGCTTGTTGTGCGCGGCGGAGTT
GAAGGCGACCAGCGCCACGCGCCGCACGCCCAGCTCCGAGTCCCGCAGCGGCACCAGCAG
CTCGCACATGCACTCGCGCAACAACCCGTCTATCGCTTGCGGCTGATCAGATATTGTGAA
CTTAACAGCGGTCACAGCAGTTGTTCTAGTCAATGGCTCTGGCGACTTCAGGAATTCCTT
CAGATGAGGTAACAACTGTTCTGGTTCTAAAAGACATAATTTACCTAAACATTCGGCTAC
TACATTACGAGATCCTTCTTCTGCACACTGACAGTGTTTTGATAATTGCACCCAGATTTG
TGGAATGAAAGGTCTTAATGCTTCTACACCTTCTGGAGTACATGCTTCTGACGAAATAAT
CTCTCTAAGTGAATGAAGTAAGAGATACTGTCGTTTTGGTTGAGCTTCTATTTCTCCGAG
GATGAAAGGTAAGAATTCGGGAAGGTTGCCCACTGCCACGGAACCGAGAGCGTAACTAGC
TGCAGACTTCACTTCCTCAGATGAAGGAGTGAATGAATTTAGCAATACTTCTTTCAGACT
TGGAACTGTACTTAGATCTAGATGTCGTCCGATCTCAGCGAGTGCGAGGAGCGCGAACAT
GTGATGCGCGTCTGAGGGCGGGTGTGCGGCGTCGCGCAGGAACCCGCGCACCGCGTCCCC
CGCCTCGCCCGCCTCGCCGCCGCCCTCCACCACCACCGCCGCCACGCACTTCGACAGCGA
GTGGAACGCCTGTTTAATATGATGTGCAGTGGAGTTGGTCTCCTGCAAGCGATGTACGGG
CGCCACCAACAAGGCGAGCAGCTCCCGACGCGAACAGCCCGCCACGTCCGCTGACACTAA
CGCGCTCAATACGCCCAACATTGCTTTTAGAGCACCACCTTGCAGTAGCGGCGACTTGGC
GAGCGCGAGTATGTTAGGCGTGAGAGCGTGCCTCGCCTCTGCGTTGAGCGCGGCCGGACA
CCGCAGACACGCGGACCGGACCAGAGCCAGCGCCGTCTGAGCGCAGTGCAGGTCCTGCTC
GCACACCAGGGCCGGGACCTCTATCAGCACCTTACTCAACAGATCGATGCTAATTGCATG
ACTGTAGTTTTGCACAAGAGTATCTAACAGCACCAAAGTCGACAACTTCAAAGCCCTTTG
GTTCTTTCTCAAGAAGGACCCGAGGATCGGTACAGCATCAGACAAGATCGGTGATAAATC
AATTCGCAGTGGCGAAGACGCTACTTTTGTCAACGCCTTCACAGTAGTTAACCTAGTTAT
TTCATTTCGGAGTCGCTCTAAAAATATCGGAAGACACACCGGCAGTTCGTTCTGTAAATA
GTCTCCGAAATGACACAAGAGTTGTCCGCAAGCGGCAATGGCTCGTTCTTTAACTTCCTG
ATCCATGTCAGTGGCCCTCAATCGAACTAAGATACATTCGTACATGGCTGGTATGAACTT
TTTCAACTCTTCGGGAGGAGGTTCCACTAAAACTTCCACTTCGCCGTCAGCGCCTTCTGT
TTTACCCAGTGGCCTCATGATCTTGACCAGCAGTTGCAGCACCCTG
(3226 bp)

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