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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26630_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		ribonucleic_acid_binding_protein_S1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0043065 P positive regulation of apoptotic process
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0061574 C ASAP complex
Transcript
Level		FPKM:11.30 TPM:9.51
ORF EntryO_TrvaMG13460_complete:A_TrvaMG_comp26630_c0_seq1
Sequence
(Nucleotide)
CACAAACGCCATAAAAAAAGGAAAACGAAGCAAAACTTTTCAGACGAGCGGTATTTACAA
TAACTTTTAAAATACAGCAGATCGTAATAAATTACCCTTCAAGTGGAAATGGCTCGCAAC
AAATCGCCATTGCCTACATCGGAAAAAGAGAAGAAGAAACCAAAAGAAAGTAAAAAAAAG
AAAGGTGATTCAGGATCCAGCAGTAGTGACAGCAGTGGAAGCTCATCAGAAAGCAGTTCT
TCAAGATCGTCATCACGATCATCATCAAGCAGCTCCGGCAGTTCATCTCGCTCGTCCTCT
TCATCCAGTTCTACAAGCAGTAGCAGCAGCAACAACCGCTCACGGCCCAAGAAAAAGGCC
ATCTCACCAAACAAGAGTCCAGTAAAGGATCGCCGTGATGCTGATAGGGAAAAGATTAGA
GATAGATCACCCATAGGAGATAAGAAAAAATCTGTCCAACCAGTTACAAATGATAAAGCT
AAAACTAAAGAAAAACAAGAAAGATCACCAGGACGCAAAAAGCGGGAACGTTCACCGCCC
CCCAGACCTACCCGTATACATATTGGTAGATTGACTATGAATGTAACACGTGATCACATT
CATGAAATATTCTCAACATATGGCAATGTAAAGTCAATTGAGTTTCCCATGGATCGACTA
CACCCACACAATGGAAGAGGATATGCCTATGTGGAGTTCACAAATGCAGATGAAGCAGAA
AATGCCATGAAACATATGGATGGAGGTCAAATCGACGGTCAGGAGATCACAGCAGCGCCA
GTGTTGGTACCATCGCGACCGCGGCGCGCTTCGCCTCGTCCGATGCCGCCGCGACACGGG
CCTCGGCGACACTCACCACCCCGGTATCGTCGGCGCAGTCCCCCGGTTCGTCGTCGGTCT
CCGCCGCGTCGACGTCGCTCCCGCTCTCCGCGCCCCGCCCCGCGCCGCCGCCGCTCCAGG
TCCTCATCATCCTCATCGCGATAACTCACACACAAACACCCACACACACACAGCAATACT
GACAGGTTTGATCAGCAACTCTTAATTTAGCCACACTTAAGGAACTTTAGTGGTTTATTC
TCTATCCGAGTCCATGTTTAATTGCTACATAAATCATACTTTATGCAGCAATTTCAATAA
ATTAACATTTTATGAACCCATTCTGGAAATTATATACCAAAAACCTATTTCCGGGAACAT
AAATTATGAACAACTTCTCACGGTAAAATTATCTATAGTAGTATGACAGTCAGAGTTATG
TATATGCACCTTAGTGGTACAGTTCTACAATGCCACAATGATTATTTGTTTTGCTTTTAC
CATAAAAAGTTAAATTCAAATGAGTCATCCTTGACAAAACCTCCAAAACAATTAAAACAA
AATGACCTATGAAGACTAGGGAGATTTAATTAATTCCTTAAAAACTTTTAGAACTTTAGT
ACTGCATTTATATTTACATTTACAACTGGGTTGAACTAAAATACTGTAAGATATTTTTAC
CATGAAAGTCCTTTTTAAACACACAACACAAAAATACATCTAACTAATAGGTAAGTATGA
AGATCATCCATCGCTAATAAACATTCTAGGGGTGTGAGTAACTGGTAAGTATTAATATTG
CATATAGATTTAATAAGTTTTTCAACTGACATTATTTTTGTTATGGAAGTTTGAATAAAT
GGAACAGTACGAGTGGTGACCATAAACAATAAACTAAGTGGTGTGATGATTTTGTAAAGA
AAATGTTCAGTTTGTTAATAAATTGTAATAATTCACTAAAAAAAAA
(1786 bp)

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