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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26626_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_tropomyosin-1,_isoforms_9A/A/B_isoform_X11_[Orussus_abietinus]
Ontology
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005862 C muscle thin filament tropomyosin
GO:0006936 P muscle contraction
GO:0007315 P pole plasm assembly
GO:0010591 P regulation of lamellipodium assembly
GO:0016529 C sarcoplasmic reticulum
GO:0030017 C sarcomere
GO:0031941 C filamentous actin
GO:0045451 P pole plasm oskar mRNA localization
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0051015 F actin filament binding
GO:0070865 C investment cone
Transcript
Level		FPKM:10.07 TPM:8.47
ORF EntryO_TrvaMG13424_complete:A_TrvaMG_comp26626_c0_seq2
Sequence
(Nucleotide)
GACGTTTCAACACTGTCAAAGTCATTCGAAGAATGTGTGATTGTGGAAAGTAATTAATCG
TATTTAAAAGAATTAGGCAATAATCGTTACCGCTGAATAGTTGTGCGAAATTCGTGACAC
AGAGTTGCATGTAATTAGTGAACAAACAACATATTTGAAGCGGCTAAGTTCGGTGGCGGC
CATTTTATTCGCCGGCTGCGTTCGTGCCGAGCCCATCTCAACGATACGAGACAGTAACGA
AACTAGCGGGGCAGTCAGTTGGCATTTTCGCGAGTAGAACGAAGGTGTCGCACTGTTATA
ACGTTTAGGAAACCGATTTTAACACAAAAGTGAATCAAAATGACGACAAACATGCAGCAA
GGAACGATCCTAGACGTTCTCAAGAAGAAAATGCGTCAAACAAAAGAGGAAATGGAAAAA
TATAAGGACGAGTGCGAGGAGTACCACAAACGATTACAAGTGGAAATTATGCGAAGAGAA
GAAGCCGAATCTGAAGTGGCTGCCCTGAACCGACGCATCCAACTGTTGGAGGAGGACCTC
GAGAGGTCCGAGGAGCGTCTCGCGACCGCCACCGCCAAGCTGTCCGAGGCCAGCCAGGCC
GCCGACGAGTCCGAGCGTGCTCGCAAGGTGCTCGAGAACAGGTCGTTGGCCGATGAAGAG
CGTATGGACGCCCTCGAGAACCAGCTGAAGGAAGCCAGGTTCCTTGCCGAGGAAGCCGAC
AAGAAATACGATGAGGTTGCTCGTAAGCTGGCCATGGTTGAGGCTGACTTGGAGCGCGCG
GAAGAACGTGCCGAATCCGGTGAATCCAAAATCGTCGAGCTTGAGGAGGAGCTCCGCGTT
GTTGGTAACAACCTGAAATCCCTGGAAGTTTCCGAGGAGAAGGCCAACCAACGCGAAGAG
GAGTACAAAAATCAGATCAAAACCCTCACCACCCGCCTAAAGGAGGCTGAGGCACGCGCT
GAGTTCGCTGAGCGTTCCGTGCAAAAACTGCAGAAGGAGGTCGACAGGCTTGAAGACGAC
CTGGTCGCCGAGCGCGAAAAAAGCAAACTCCTGCAAGAGGAGATGGAGGCCACACTCCAC
GACATCCAGAACATGTGAACACACACACACACCCGCGCACGCCCGCTACACTCACGACAC
ACACTTTTAATTTATTCAGGGCACTGGTTACAAGCCCTTTAGCCTAACTGACAGCCCGGT
GTTGCCGGCTCAAACTTTTTCTACCATTATGAAACTTTCGTATAGTTCTAAATGTTTTTT
CTTATGATTTTTTAAGGTATTTATAGTGATGTCGTTGAGTCTAGCGGGTTTCTAGATGTT
ACTAGTTTTAGTTTAATTGCCAACCGCTTTTTTATGTAATGTCAGAATATGGAGTGTTTG
CTGAGACACTGCCAAGTGCAATTTTTTTATTTTGATACACAAATACTAATACGATTCCGT
GTAACTGTTAGAGAATGTATCTCGCATACTTTGTAGTCATTATTTTATGAGCGTGCCTGT
GTATGCCGATGATCGATGTTTTAATTTTTTATTTTATTTACAAATGCTTTATGGCTCGCG
GTTATAATCTTAGTTACGTTCGACATTCCAAAATGGGGACCAAAATAAACACATTTTACG
AGTAACGTCGGATTGTAAACACGATATAAAAGATTGCACTTTATCAAATCAAATGATCGT
TAAAGTCTGAACGAATTATCCATTTGTCTTATGATCATAATAACTTTGTTTGTTTGTAAT
TTGTTTACTTCTCGCGAAATAAATTAATTTAACAAATGAACAATACACACAGAATTATTT
GCACTTTTGTTTGCAATTTTTTTAATGAAAATATATTTACTTAACACTAGAAGAGATTAG
AAATTTTATTTAATGAGTGATGGTAACACGTAAATAATGATTTTTATATGAATATACTTG
CTATGACGTAGGTATTCGATATTCTATTTTTGTTTCGAGTATGATTATTTCTCGTGTCAT
AATTTGAGTTTGTTGTTATTTATTTAAATTAATCGATGAGTAAACGACGATCATTCCATA
ACTGTAAATATGAACGGTACAGTAGTTTATCGAGGAGTAGCGCTGGCAACACTCGCAGTG
TTGTCGTGTCACTACTACGACTAGAGAGTACTTGGCTCAGGAACGCGTTACTTATATTTA
TATACGTATAACGATCGAGTGGATTCCGTCTTTATAATGTTATCGATTAATGAATTGATA
AGTTCGTGAGAAATAAATTAATGATTTTTAAGAGTATTCTAACACAAGTGTTTAAAAATA
TATTGTATTATTATT
(2295 bp)

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