SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26625_c2_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_F-BAR_domain_only_protein_2_isoform_X1_[Bombyx_mori]
Ontology
GO:0001786 F phosphatidylserine binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0010324 P membrane invagination
GO:0016020 C membrane
GO:0035091 F phosphatidylinositol binding
GO:0043009 P chordate embryonic development
GO:0048268 P clathrin coat assembly
GO:0072583 P clathrin-dependent endocytosis
GO:0072659 P protein localization to plasma membrane
Transcript
Level		FPKM:0.63 TPM:0.53
ORF EntryO_TrvaMG13416_complete:A_TrvaMG_comp26625_c2_seq1
Sequence
(Nucleotide)
AGTCAGCTGAATCTGAAAAACTTAGGAAGGAAAATGCATCAGCTAAAGATATAGAAAAAG
CTGAGGTGAAGTTAAAGAAACTGCATGAGGACTATTGGCAGTTGGCTGAGAAGTATAATC
TTGTCAAACAGGATTTTGAAAAGAAAATGTCCCAAACATGATTTTGAAAAGAAAATGTCC
CAAACATGCAAACATTTCCAAGATGTTGAGGAGGCTCATCTGAAACAAATGAAACAATTT
GTAAATGCTTATGCTGACATCATTCAGAACAACCATGATATGATGGGACAGGTGCACAGA
GACTTCAAGCACCAATGCCTAGAATTAACTGTTGAAAAACTGTTAGAACAATTCTTGATA
GAGAAATACACTTCTATAGAAAAAGCAGTGTTAGTTGAACTGCCCCCTACCTTGCCTAAA
CCAGGGTCAGCAAACAACTCCATATCTGAAGCTGATCAGATATCAACAGTTTCAAATGGG
TCCCACAAACCTCCACAGCCAGCAAAAGCACCAAAAAAAGAAGCATCTTTTGCAACAAAA
ACCTCAAGACGTACCACCTCTCTTTTAAACCTATTCACACCTAATTTCCAAAGTAAAGAC
GAGCCTGTTGTCAATATTGATGGTGGTGCTCCATGTTCTGCACCTTCAAGTCCTAGCGGT
ACTCCAGCTACACCCGTAGCACCAGATAAAGATGATAACATGGGCCGAACTACATTAAGG
GAATCCAAATGGTTCTTACGCAGTAAAAGAACTAAGCCAAAACAAAAGAAATCTAAAAAG
AAAAAAGATGATAACTCTATTAACTCAACAGCTGAAAAGTCTGATTTTGAGGAGAAGGAG
GAAGAAACTCCAATCAAGGAGGATCTCATGAATTCTCCTGAGGTGGATGAGGAGGGGTAC
TGCATAAGACCAAAAGAAGAAAAAGGCAGTGTGTACTCCTCCAGTGATTCTGACTCTGAG
GAGGAAAGGGAACAAAAAATCCATGTGGAAATTAAGCCTATTAGTAATGGAAGTGGTCCA
ATGTCAGCTAGTGTTGATGAGCTTAGAGCTACTGTAGAAAATATTTCTTTGTATAAAATA
GGTACAACAACACGTCGTGGTTCTAATGTGAATACTAGTAAAGCCAGTAATGATTTAGTT
GGCTTAGACTTTTTCCCCAGTCCAAATGTCAGCAATCCAACGTCACCTCAAGCAAACGCA
TCGAATCCTTACGCCCCTCTCCAAGGAAACCAGTCGCATTTGTTTGAGAGTCCCACACCT
GTATCGAACACAGAAGTTGGTGATCTTTTCTCTGAAGTAGGCGAGATCAGTCAGTCTAAT
ATTCGAACATCTACGCCGACTATATCAACTATTTCTTTGCCGCGTCCTCCATCAAGAAGA
TCGGACGGAGAGTTCCGAACGGCTGGTTCCACAGGTTCCCGAGGTCCTTCTCCGCTCACG
ATCGGCATGGCGGATACTATACCGTTAGCTGTGGCTTTCCACGAAATAATACATTCATAC
TTCCGTGGCTCTGACGAGTCTAAATGCCAAGTCAAAATGTCTGGAGACATGATGCTGTCT
TTCCCCACCGGTATCGTAGGCGTGCTCGCGAACAACCCGAACCCGGCAAAACTGTGCTTC
AGACTTAAAAACATCCATAGATTAGACACGGTCCTGCCTAATAAGCAGTTGGTTTCTATC
AATCTAGCGACGTCTACTCGCGACAGTACAGTCGTAGAGTTTAATATGCCGGCTCTGACG
TCACTCTTGAAACGACAGTCCGAGAAGAACCCCACCGCGCAATACTTCAATGTCGATATA
TTAAAATACCAAATCAGACCGAAAGGCGGTGCCGCTTCTTGTCCGTTTCAGCTGGTTGCG
TATTGGAAGTGCGAGAAAGACCACACGGATCTGAAAGTCGATTACAAGTACAATTTGCAC
GCAATGAGTCCACCGTCCCCTCTTTTGAACGTGTCTGTATGCGTTCCTGTGAATGGGGCT
GTTAAAAATGTTATAGCGATGCCCAAGAATATCTGGAATGGGGAAACGGAACAGGCGTTG
TGGCGGTTCACTGAGTTATCGCAGCATTCTGAGGACCGAGGCGTGGGGTCATTACGAGCG
CGCTTCGAGCTGACCGAGGGGCCCTCAGACAAGGCTACTCTCTCCTCTCAGTTTAACTGC
GAGGGCGCGACGCTCTCCGGGATTGAGTTTGAGCTAATCGGCAGCGGATACCGCCTATCC
CTAGTAAAGCGCCGCTTCGTATCCGGGAAATACATTTGTGATAGTGAAATGAACTAATTG
GTCCAATGTCCGCAAGAGCCCGCGGTGTCTCGTAAATCTCGTTGTCATATACCTCCGTGT
ATGCGTTTTGTAGATTTTTATTGTTAAATGTGTTTTTCTGTACCTTATAGGACTTGTTTC
CTGTCCAAAATAAGTTACGTACGTATCACAAAATTATTTTGTCAATTCTTCGAGGTAAAG
TTAGTTTTATCGATGTTACTTGTATGTGTGAGAGAATGGTATGAAGTGTTACATTGGAGT
ATTCACGTATTTATCATGTGCCATTTTGTAATATATCTACTGAAAATGTACACAACGTGT
GCTTGTTCCTTACACATAA
(2599 bp)

- SilkBase 1999-2023 -