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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26620_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nuclear_pore_complex_protein_Nup98-Nup96_isoform_X1_[Bombyx_mori]
Ontology
GO:0000776 C kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0003723 F RNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0006260 P DNA replication
GO:0006405 P RNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0008139 F nuclear localization sequence binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017056 F structural constituent of nuclear pore
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0034398 P telomere tethering at nuclear periphery
GO:0034399 C nuclear periphery
GO:0042405 C nuclear inclusion body
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0044615 C nuclear pore nuclear basket
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
Transcript
Level		FPKM:5.26 TPM:4.43
ORF EntryO_TrvaMG13399_complete:A_TrvaMG_comp26620_c0_seq1
Sequence
(Nucleotide)
ATATCCAGGATCTTAAAAGCTTGTGTTTCTTTAAAATAAATTATTTAGTTGAGCAAAGTC
CCATCGATTATTATAGATTTTGATTAATACACTCGCTTGTGACGCTATCTTCAACATTCT
AGTAGATTTTTAGTTGATCTTTACAATTTTCTAGTACAAAAACATTATGTTAAATCTTAT
AATTAGTTCAGGGCGTGAGCAGAGCCGTGTAGGTTCCTTCTAGTTTACGCTCAGCTAGTT
CTGTTGTAATCTTGTGCGTGGCGCAGGCGGAGCAGTCCGGAGGTAGTTTCAGCGCGGAGA
CGAGCGACGCGAGCTTGTCGGCTGACAAGTTGGCGGACAACGTCAGCCGCAACAAGCGAC
CGCCCATCTGAGCGCGAGCGGCGGACATACGCGGCGACATGGCGTTTGGTTTGGGTAACG
CTCGACACGCGGCCGCCAGGCGAGGCCGGAGCGCTTCCACTCTGGACCAATCCTGACCTT
CCTGCTGTATCGACAATATCTCTTCACAAACGTGTATGTAATGTGTGAGAGCGTGTCCGC
CGTGCTCCCAGCCCGCCACCTCGTGCCGCTGAGCCGCCTTCTCCAGGTCACTCAGCAAAC
GAGATATCATCGAGAACTCGTCATTAAGTACTGCTTCCGGTAACAATTGTTCCATGAGCA
CGCGATGCGCCGCGTTCCACTGCTCAGCTCCGAGGAGATACTGCACTTCCAACTCGGGAC
GATGTTCGTATTTAGCTCTATAAGCTTGCGCGAGGTAGATCCATTTCCTGGGTATATTTA
TTTCGTCCAGCAAGTCCAGTCTAGATTTAGTTTCCTCGTCGTACTCGGCGGGCACGTGTC
GGGATATGACGCTCTTTATTAATGACGCTCGAGCATGGTCGTTTTGATGGTAAGCGAGCA
CGACGACAGCGAGGTGCCACGCGCCCGCCGCCTCCAGCCGCTCCGCCAGCGACACCACGC
TCGCCACGCTCGCCGCGCCGAACCACGCGCCCAGCAGGAAACAGAGTGTATAATCATTAG
GATCGGGCGTGTAGGCGGCTGGTTCCAGTTTCGGCCTCTGATTGAATGCGCGAGCCCTTA
TCAACTCGTAACGTAAATCTAACACCGCTTTGCCGCTCCTGTTACCGACACAGCAGTAGT
CTTCGCTATAATCCGGTAATGGCGGCCTCATGTCGACCTCGTCGCCCAGTGACGTCAGAT
CAACGTTCTCATCCGCACCGAACATGCGCTCGTACGTGCGGACTACTGTTTCTAATGACG
GTATTTGAGGGCATATGTATCTGGCCGTGGCGTGTAACGTCCTGAGCCACCCGACGTGCC
GGACGGCGGCGGGTGCGTTCCCGCTGAGCGCGTACAGAGCGCACAGTCTGTTGCTGCTCA
TCAAGCGATCCGCCCCGCACTCGCGCCACAGCGACAACTGCCGAGCGAGTAGACCGCGGA
ACGCCACGTCACCGCCCGCTTGCGCGATCAGCATAGCCATATTCAAGTCGCCATTTTGTC
GCGCCAGCTTGCACGCTTCCAACGTTCTGCCTGCTAATAGTAACGTCCATATCCGAACGC
TGTGGGTGTCAGATTCGTCTTCCTGTTCCCCGCTCTGTGGTTCCGCCAGGTCCTTGCTGG
TGAGTGCAGCGACCGCGTCTTCGAACCAGGCGAGCAGTTTCTTGTGTCTGTTCACTATGG
ACAGCTCATCTGTACCAGGGATACCGTCGTTTTCTAAATCAGCTCCCCAGAGCGCGTCGC
AAAGTTTCCACACTTCGCTACAATAACTTGCTGATACGCCAAACTTAGGAACGTAATTAT
GTTTGTTAGAATATTGTATAAAATCTTTAAGCACAGCCAGTCGAGCCACGGGCTCCGGTC
GCAGCGACAAGCGCGGACATGCATCAGGCGCGCACTCCGGGACCACGGACCACTGCAGTA
GAGTCTTGATGTGGGGCTCGAGGATCTCCTGTAAAGTCGGTTGACTGCGATCGGCGGAAA
GCGCCAAGGTTGCGACGAGTCGCTCCGACCAATCTCCGGGAGAACGACCGCTCAAATACT
TGTCCAGTGACGATAGTTCTGATGATTTAGGCAGTTCGCTGTACTTATTATAAGTAGTGA
GCAGAGTAATGGTTGATTTAGGTCCGAACCCGACTCGGCTGTGACGAGATTTACTTATAG
TCATATCGGCGATACACGCGGCGTCCAATTTACCAGCTATGGTGTTTTTGAAGGGCGGCA
CTTTTCTATGATACTTCAGAACTATTGTGTAAGGTTGAACTATCAGAGGCCTCATTGGAA
GTTCATCTGTTGGTTCAACGCTGGGTTGCGGCGGCTTGGTGACCGTCGACAGCGTGGGCG
ATGGTAACCGTTGATCGTTGAGCAACGAAGCGGATATCGGCACTAACTGTTCGCCCGTCG
ACACCGACATGTCGTCATCCATTTCTTCATCAGTATACAAGGAAGCCTTCATCAACTGCA
CGTTATGACTCTGTCGGTTTTCTAAACGCGCCAATTCACTCGTCGGACTTTTTACTCCAA
ACGCTCGGTTTTCGAGGAACATACTATGCGATTCAGTATTGTCTTCAGCCGTATCCATGA
TGTCAAATGCTTTGCTATTACCATTGAGTGATAGGAGCGATGTATGATGTAAATTGTATA
AGCTATCTTCAGTGACCAGTCCGGAGCTAGCTAATCCTCCTAGGCCTCCTAAGCCTCCCA
ATCCAGGGGCCTTTGTCTCTGGCACCAATACAGGGGGCTTTGGCACTGGAGCGCTCGCTT
TCTGTAGTGACTCGTTAGCGACAAGTTGCCGTTTCAACACATCCGGTGTCGGATCGTCTT
CCTCGTCAGAATCCGTCAAGCCATATTTACTGAAATGCTCCACCCTGAACACCCAGCTGC
CAGTCTGTGGTCTGTATTCAATGAACTTAGTATCGTGTTTCTCGCACACTCGACGGAGCT
TCCCTTCGTAATCCAACTTCAATAATCTTTCCGGTTCAGTAATAAGTCTCTTCTCGGTTT
TGTCTCTGGGCCACACGCGATCCAAAGTGACTATGGCTCGACGATTCAACGACACACCTA
CGGGAGGCTTGTCGCTGTCCTCGGGGTAGATTATAACTTCCTTGTTCAGGAAATGTACCA
AAGCGTCTAGATCTAGTCCCGCGACATCTATCTCCGAGTCGTAGTACACGTTGCCGTAGT
TCTTGCGACCGATCGTGAGGTGCGGCACGATGCAAGTACCGTCCGAACGCATGTAATTGA
TCATATCGTCCAAAGTAGGTATGGTGTAGTAGCCAGGTCTCGTCAGTTTGACGCCAGTCG
GATGTGGCGGGGCGTCGCGTGGCGCTACATTTTCATCTTCAGACACCGAAAGAGTATTGT
TGCTGTCCTTTTCCATCGAAGTGTTTCTCACTCCCAACTCTCTGACTGAGCTCTCCACTG
CATCGGGATTAGAAGACATTATGTTTTTACGTAGCGGCTTAGTTGTCAACCAACTTGATC
GCCTTTCAGTAACGTGATCCGATACTTCTTTTTCAATATTAGGATAGATTCTGTTCCCAA
TTTCAGTTTCTGGTTTTTCTTTGTTATCTGCCCAGAGACTACTTATCTTTGGTGTGTTTG
ACCACCGGTTGTGTTTTTCCGATTGCAAATCAACATTATCAATATCGCTAGTACTGATTC
TGGTTCGACTAACATCGGGCGATCTGTCCACTTGATCGGTGGAGGTTTCCTGAGTTTGAA
CTGGACCAGTCGGTTGTTGTTCAAATGATCTATTATTGGTGAAATCTTCATTTCTGTTTT
CGTTGGATTGCGCTCGTAGTACTAATCGTTTCCGACTCGGCTTCAAACACAGCTTGTCTT
CTAAACTTGAGTCCGATTCTTCTAGGCCGTCGAACAGAGATTTCTTGTGTATGGGCAGTT
GTCTCGGTTGCACTCTGGTTGTCGGTGAACTGACTTTGTACGCAGACTGAGAACCTTCCA
GAACAGCTTTCAGTGCTAACGGATTAGTGGGCTTCAAGATCTCTTCTGCTGTTGTTGAAG
AGTCAGGCAGTAGATCTTTAAACAGCGGCGAGTCTCCATAAGGTCGCGCCGCCATCGTCA
GTATCTGTTCGTGAACGTTCCCGCCCGCAGACGCACCAGATAGACTGTTATTTCCCAGTA
AACTGTTGTTCGCGTTGAGACCGGTGCCGAGACCGAAGCCCGACCCGAGGGTACTGGTGT
TACCGAACATTCCACCGCCTAGCACATTATCAGTTTTGAACGTAGTAGCTGGCTGCTGTT
GAAACGTATTAGTGCCCAGATTACCAAACGAAGGCACTAGCGGTTTACTTTGGAACATAT
TGCCTCCCAAACCGGTGTTCAACCCAGGTGCTGCCGGTTGTTGCGCCGTGAACCCGAAGC
TGGGCTGCGTAGTGGCTGGTTTACCGAACGCGGAGTTCTGTCCAAACAACCCCGTCGTTT
GCGTGTTAGCGCCAAACGCAGGCGCCATTGTGCCGAATGCTGGCGTGGTGGTCCCGAAGG
CGGGCGCGGTGGTCTTGGCTTGGAAGGCGCCACTGGTGAAGGAGCCGAAGCCCGAGCTGG
CGGGCGTCGCTCCGAACGCGCCCGTCGCAGGCTTCGCGCCAAATATACCGGTCGACTGAT
TCTGTGTGTTTGCTCCGAAACCGAATGTATTTGTGTTGGTTGAACCGAACAGAGGTGCTT
GTGTTGTCGTAGTACTGAACAAACCGGTGCCTGCAGTACTGGTGCCGAACGTTGGTTTGT
TGGCGCCAAATAATCCTGTCGTCGTAGTATTCGTGTTACCACCAAATGAAAATGTACTGG
CCTGTCCGAAGCCTCCAGTGGTCCCTCCAAGGCTGGTTCCAGTTCCAAACATACTCGGAG
CGCTCGTCGTGGCTGTCTGACCGAAACCTGTACTACCAAACAGTGGTTTGTTTTCAGTGG
TCTGCTGAAATCCTCCGAACATGCCCGTGTTGGTTGTAGATCCTTTACGACCCGCCATGT
AATCTTCCAGACGTAATTCCTCTAAAGATTTGCTCTCGTATTCCTTCATGTAAGTAATGC
AGTGGTGTTTAATATTGATGTTCTGCGATGTACCGTTTTTCATGACCATCTCTGTTCCAA
CCACTGGATTGTACTTCACATGTCCCGTACCGGCTTGCTGTTGCTGTCCAAAAGCACCAG
TATTAGTGTTAGCCCCGAACAGTCCTCCCCCAGTCATGGTGTTATTTTGAGGCGCGAACA
AACCAGTTCCGGTTCCGGTAGCGGGCGTCCCGAACAGACTTCCGGTCTGCGCGCCGGTTG
TTGCAGCATTTCCGAAACCAAAACCTGTCGGTTTAACACCAAACGAAGGCGTTGCCTGCG
TATTTCCGAACAGGCCTCCGCCCGTCGCCGAGGTGTTACCAAAGAGGCCGCCCGTAGTGG
TACCGCCGCCCCCGAAACCGAACCCCGTGTTGGTGGTACCAAAGGCGGAAGTAGACGTGG
ATGGACCAGGGTTTCCAAATAGACCGCCTGACGTGTTGTTTGCGAATAGACCTCCTCCAG
TAGCTGGTTGAGCTGATGTGCTGGCTCCAAACGTGGCAGTGGTAGGTTTGAACCCGCCAA
ATGGAGATGCTGTCGTAGCTCCGGAGTTAAACGATCCGAAGCCCGAAGTGGCATTGCTGC
CGAATGCCGGCTTTGGAAACATCCTTGTGATATGTGAAGACTAAATCTCAAATATCGCCT
TTTAATTGAAGATCAAAAAATCTCCACCATGTTGGTGATCTTATATATAAATATTCTGGA
ACAACTTCTTTGATTTAACGGGTCGTTCTTTCTTACTTTCTATGTCAATCACTGTACTTC
GGTTAAATTGCGTGTAAATTTGTTTAAATCGACGGAACTTTACAAAACACAAACTAGAGC
AACG
(5884 bp)

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