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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26611_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nipped-B-like_protein_A_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000785 C chromatin
GO:0003007 P heart morphogenesis
GO:0003151 P outflow tract morphogenesis
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007420 P brain development
GO:0007507 P heart development
GO:0007605 P sensory perception of sound
GO:0008022 F protein C-terminus binding
GO:0010468 P regulation of gene expression
GO:0019827 P stem cell population maintenance
GO:0031065 P positive regulation of histone deacetylation
GO:0032116 C SMC loading complex
GO:0034088 P maintenance of mitotic sister chromatid cohesion
GO:0034613 P cellular protein localization
GO:0035115 P embryonic forelimb morphogenesis
GO:0035136 P forelimb morphogenesis
GO:0035261 P external genitalia morphogenesis
GO:0036033 F mediator complex binding
GO:0040018 P positive regulation of multicellular organism growth
GO:0042471 P ear morphogenesis
GO:0042634 P regulation of hair cycle
GO:0042826 F histone deacetylase binding
GO:0045444 P fat cell differentiation
GO:0045778 P positive regulation of ossification
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0045995 P regulation of embryonic development
GO:0047485 F protein N-terminus binding
GO:0048557 P embryonic digestive tract morphogenesis
GO:0048589 P developmental growth
GO:0048592 P eye morphogenesis
GO:0048638 P regulation of developmental growth
GO:0048701 P embryonic cranial skeleton morphogenesis
GO:0048703 P embryonic viscerocranium morphogenesis
GO:0050890 P cognition
GO:0060325 P face morphogenesis
GO:0061010 P gall bladder development
GO:0061038 P uterus morphogenesis
GO:0070062 C extracellular exosome
GO:0070087 F chromo shadow domain binding
GO:0071481 P cellular response to X-ray
Transcript
Level		FPKM:4.74 TPM:3.99
ORF EntryO_TrvaMG13358_complete:A_TrvaMG_comp26611_c1_seq1
Sequence
(Nucleotide)
ACATATTAGCGTCCATAGCGCGGATACCAAGTTCGAAACATAATTTACGTTCGTTTCAAC
TTAACGCAGATCAACACATTCAAATGCTAACAGCACTTGTCTTACAACTTGTTCAATGTG
TTGTCACACTTCCGGAGACCCTTTGCAAGTCTAATGAGAAAGACAACAAGGATCAACCAC
CAGAATCTTCCGATAGCAAAAAACATGTTGATAAAGACCTGCTTATGATATCAAAGTATG
AAGCAGCTATAAGTGTAGGTGGAACATTCCTAACATCATTCCTGAACAAGTGTCGGAGTC
GTTCTGAGGAGGTGGACTTTAGGCCGTTATTTGAAAACTTTGTCCACGATCTTTTAACGA
CAGTCAACAAGCCCGAGTGGCCGGCCACAGAATTGCTGCTCAGCCTACTCGGAACAATGC
TGGTAAAGTACATGTCTGACAAGACAATGGAGATGTCGGTCCGAGTGGCGTCGCTGGAGT
ACCTCGGGCTGGTGGCGGCGCGGCTCCGCAGGGACAGCGTGCACTCGCGCGGCAAGCTCG
CCGCCATGGACGCCGTCGTGCGGGACATCCGCGCCGAGGAGGAGAAGGACGGCAACCAGG
CGCAGAGCGTGACCTCTGGTCTCGACGAAGACGAAGAGCGAACGGAATTTCTGCAACGAG
TCCTGTTAGATTATCTCGCGATAAACGGTCAAAAAGACCAAGCGTGGAATTGTGCCAGAC
ATTTTTACATTACTCAGTGGTACAGGGATATGGTGGTGCAGCCGAAAAACACATCACCAA
CGAAAAAACCCAAAAACAAATCTAAAAGACGTCACAAAGATGATTCCACTGAAGAGGAAT
CGGACGCCGACGATGACAGCGACGGCGGCCTCAAGGACTCTAAATCGGATCGAAAGCACT
TTCCGAGTGCCATCGATTCTGCAGAGAAATTCAAAACTATAGAACGACGAAAAAAGTTTT
TTATAGAGAAAATTAGGCCTTTTAGGTATCAGGGTGGAACTCAAGTGCAAGTGATGCAAT
CGTACATAGACTATAGTGGAGCTGAACTCATTTCACAGTACTTAGCATCTAAAAGATCGT
TCTCGCAAAGTTTTGATAGGTACTTACGTAAAATCCTTGTCATATTATGCGAAAACACAA
TCGCGATACGAACAAAAGCTATGAAGTGTTTGGCGATGATTGTGGAAGCAGATCCGTCCG
TGTTGGCGAGGCCCGACATGCAGATCGGAGTCAATCGATCCTTTCTGGATCAGTCAACGG
CCGTAAGGGAAGCGGCCGTCGATCTCGTTGGGAAGTTCGTATTGAGTAGACACGATCTAA
TTGACAAGTACTACTCAATGCTCTCAAATAGGATATTGGACACCGGTGTATCTGTGAGAA
AACGGGTGATTAAAATATTAAAAGACATCTGCATAGAGTGCCCCGAATTCCCTAAGATAC
CAGAGATATGTGTGAAAATGATCAGACGTGTGAACGACGAGGAGGGCATCAGGAAGCTGG
TGATGGAAGTGTTCCAGAACATGTGGTTCAGCCCGTGCCCCAACAGCAGCCGGCCCGGCG
CGCTCGACATGACCGCGGCCGCCGCCGACCCGCTCACCAGGAAGGTGCTCAACATCACCG
ACGTCGTCATCTCCTCCCGCGACATCGGCCTCGAGTGGTTTCAACAGTTACTTATGAGTT
TATTTAAACCTAAAGAAGATAAAGATGACTCTACAAAAATAATATATCAGCCGCCTAAAT
CCTTGTTAGTAGCATGTCAGCAAATAGTAGACTGTCTTGTAGAGAGTTTACTACAGTTAG
AAGAAACAAGTACTGATGGTTCTGGTTCATCACAACGTATTTTAGCGTGTCTTTCAACAT
TACATTTGTTTGCGAAGATCAGACCGCAGTTGCTTGTCAACCACGCCTTAACTCTACAAC
CGTATCTTAGTTTAAAATGTCAGAATCAACACGAGCAACAAATAATGTCAACAGTGGCGT
CGACTCTCGAGTTAGTGGTTCCGCTCATGGAACACCCGAGTGAAGTGTTCCTCGCGCAGC
TGGAGGAGGACGCCGTGAAGCTCATCCTGCAGCGCGGACAGCTCGTCATCGCCTCGTGCA
TCGCCTGTCTAGCCGCCATCGTCAACAACCTCACACACAATTACAAACTAATCAGAGATG
TCTTCAATAAGTACCATGGTATTTTACTACAATGGAAAAGTAGTTGGCAGCGGAATCCTG
AAATGACACGATCATCACATTCTAGGCCTCATTTTCGTCGTTCTCTCTTTATCGTTGGGT
TATTACTGAGATACTTCGACTTTACTGACGCTAAAGTTATTGAGGGTCTTCCACTTGATA
TAAAAGAGCAGGTATATTCAACGCTTATGTTTTTTGTTGGATTGGAGGATGAAGACTTCG
TTTCACATACATTAAAGTCCCTCGGATCAGTGTGTGTGCGACATTACGAGTTCATGTTAC
GTCCTGAACTCAAAGAATTTTATCATCAACTATTGACGTCAGATTTAGCGCCAATAGAAA
TGAAAGTGGACGTTTTGAGGAACATTGAAATGTACTTACAAGAAGAAGAGCAAAGGATGA
TTAGGCAAGATAAGGAATGGTCAACAAGGTCAAAACACGAGAATCTCAAAGAGATGGGCG
ACGTATCGTCGGGCATGGCGTCGACTGTGATCCAGCTCTACCTGAAGGAGATCCTGGGCT
CGTCCATACACCACAGCACCGTGGTGCGCTCCGCCGCCATGAAGGTCGTGCAGCTCGTGC
TCGCGCAGGGGCTCGTGCATCCCGTGCAGATTGTACCATATTTAATAAGTATGAGCACAG
ATCTAGAGGTGACAGTGTCGCACACGGCTGATAAAAATCTCCAGGAAATAGATAAGAAAT
ATCCTGGTTTTATTCACATGAAGGCACAACTAGGAATCAAACTTTCATACCAATTACAGA
AGACGTTACAATCGAACAGTAGAGATAAAAACGTCATAAGAGGTTTTAGGAAAAAGGAAC
AAGATGATCTGCCTACTGCGTTAAATGGTTTCTTGTATTCATTACTGAGAAACACGCGGC
CGCAGAGACGAGCTTTAATATTGTCTTTGTTAAAACAATTTGACGATGTTTCGACTGCTC
CTTTAGATCAGATGTTGTACCTGGCTGATAATTTAAGTTATTTTCCATATCAAGTTCAAG
ATGAACCATTATTTATTATACATCATATAGATATCATAATTTCAACATCAGGGTCAAATT
TATTACAGCTTTTTCGTGAGGGCTTAATAAAAACGAGCAGTGGTGAGAAGGGAGGTGCAG
AAGAAGAGGATGAGGAAGAGGAAGACGCCGAGGCGCTGTGGGCGCGAGTACCGCACAACA
CTCGTGCACTGCGGGACGCCATGCGGCAGGCGCGGGGCTGTCTGCTGCTGCTCGTGCTCA
AGCAACACCTCAAACAACTGTACGGCTTCACGGACGCGAAAATCAATCAATACTCTCCGT
CGGAGAGCGCTAAGGTATACGAGAAGGCGGTGTCGAGGCGGCACGCGCCGATCTTCGAGC
CCAAGGCCACCATCCTGCAGCTGCACGAGGACGACTGCGACGACGAGCTCGACGAGCGCG
GCCGTCGGAGACTCATTAACGACTACCTTGAATTGAAGCAGTTGATGCTGAAGTTCGACC
CCGAAGAGGAGGACGAGGAGGAGTCTGCGCCGCCGCCCGCGCCCGCGCCGCGCACGCACA
CCACGCCCGCGCTCAGCCACGACATGCGCTGCGATAACGTCGCGCCAGAACCAGGTCTAG
TTGCAAGTCCTTCTAATACTTGAGCAGCGGCTAAATGATCTCCGCATTTCTCTAGAACTT
TCCATAGAAGATCTAGAAGGTGTAAGGAAGTAGCCGGTGGAGCAGACCTAGCTGCTGCTT
GTAGATATGTCCTCAAGGACGAAGGTGGCGCTCTTCCAAGGGATAATAATTCTGCACCGA
GATTCTTGGAAACGAGCCATTCGTAAACGGCTACATGTAGTAATTCATCATCTCGCGCCA
AACAGAGCCACACTAATTTCCTGCCTTGATAGTTGGCATCAGCAGGCGAGAGTGTGACGT
CAGCGTCTGCGCTCTGCTGCGCGGGCGAGCGAGGCGGCGCGGGCTCGGTGCTCGAAGCCT
CGTTACTTCGTTCGTACAGACGCTCCAACGCGAGACACACTTCGCGATATATCTCCATTC
TTCTGTAATAAGCGATGTGTCCCTCCCGGTCTTGTGACGGTTGGTCGCTCTTATAATAAT
GCAATGCTTTGTCTTGAGGATCGATTTTGCAGGCGCAAGTTGTACACAACTCCACTACTC
CCGAATAAAACCCGACCGATACCAGTTTTGAACAGACTAACGGTAAATTAACGTTGGGAG
CCACATCTTTGCATAGTTTCAAAGCATGTTGCAGCATTTCCTCTCTTTCTGCAGGGTTCT
TTTGTTGTTTGGCAAACATTAACAATTCATTAGCCTTGGAACAAGTAGCATCTTCTTGTC
TATACAATGTGGGACATAGTTGTCGTAATTTCTGTGAGATTCCGTCGACTGAAGCATTAT
CCCGCAAGTATCCAGCCACTAACGATCCGAGAAGTAAACACGCCACTTCTTGACCGCCAA
CCAACAATTCTCTAAAACTAGCTGCTTGCAGAGCATTCTGTTGATCAGATGGTAGACTAG
CAGCTATCACATGGAATTGATGCTCACACAGTACCTTCCATAGATTTAACATCTCTATAG
CCATCGAGACGAATCTTTTTAAAGCCTGCAAAGATGTGTGTTCATCAGAATTTTGCGGCG
CTAATGTTCGTTGCATAAATGCAGCTACGCGCTGTAATTTCTGTGCTATGTAGGCACAAT
CTTCACCTGTCACTTGACTAGACATGAATTCTTTACTGTCTGGTGTTTGCGATTTTGATA
CACATTTTAAATTCCAGATAGGTAGTAGTATTCGACCGACATAGATATACAGGCCGTTGT
GTTTTGCGCTAAACTCTATATGCATGGGATAGTTGGGATCCCTCTGTTGCTGCGTAACAT
TTCCATTGAACGATGTCTGGTGGTAAGGGGTCGGACTCATTCCGTACTGCGGCTGTTGAG
ACATGATGGAATGGTTTGGTGAACCAGGGAACGATTGGTTCATATGTTGCTGGTAGGACT
GATTAAATTTATTTGGTTGTATTTGCATTTGACCTTGTGGGCCTCTCGACATTGGCGTTG
ACATTTGTCTAGGAGAGAATTTTGGAGAACCTATACTTGATGTCATCTGTGTGGGATGTT
GATATTGAGGTGCAGGCGTCATTTGAGTTCCGTATAAGAAGAAAGCTCTTGTAGCCCACT
CACTGATAGATAAATCGCCGCTTGTAATGTCTTCGCACGCCAAATATAACGCGCATGCAC
ATGCTTGTTCAACATTTAGCAGCTGGAAGAATTCCTTTACGGCATGGGCTTCAGGACCAC
GACAATCTCTCAGCAATGTTCTCAGCAAGTCAGGGGCGGCTCCCGCTGTTATGATGCAAG
CTCCTGCACCCGTTACTACTGCCCATCTTGATACGGACCACACTTCTTTCTTAGTAAGTA
GCGCGTTAGAGATGTGAGCGGCGTGTTGGTGCGGCAAGGCGGTGAGCGCCCACGCCTGGC
CGTCCAGTCCCAGCACGGTGTGCGCCTCGCTGTAGGCGGCGCTGCCGGCCGGGATGACGC
GAGACAAACACCACAGCGTCTCCGCCTCGCCGCCGCCAGACGAACAAACCATCACCAATG
TACCATTTTCGTAAATAGCACTGTGAACTTGCTTTGGCTTTAAAACAGCAGAGTTCAGCG
TGAATCCGGGTGGTAGTCGTACATGCAGTAAAGTCAAATACTGTGGCCTCTGGGTGTCAT
TAGGGTTTAAATCGCCACCTCCAGTACTAAAATATAATCTGGCACCAGTCTGTGTAACTG
CTACTAAATTCAATTGATCCGATTCCAATTGGTCTACTGCAGAAATGGCTACAACAGGCT
TGAAATTGCTTGCTTCCAAGGTTTTGACTATTTCCACAGCAGCTGATACAATCTTCCCCT
GAGTCAACCTTACAACTCGACTGAGACTATCACCATCCTTTCCCAAATCATATAATTCAA
TACATCCTTTTTCACTAAGTGTATAAAGAAGATTTCTAGTATCATCAATTTCTATTTTGA
CTATGGAATCCTCATCATATAATGCAGCGTTGAGGAAAGATGGTACTAGGAATGATAGAG
TGCTTGTAGAATGATTTACTTTCTTACAGTGCTTGCCAAACCATCCTAACTGTGCCTGAT
AAGTTATTTCATACAGACACCCATCTTTGCCTCCCATAAATATTCTTCCTTTTGAAGAGG
ACTTAACACACATCATTGAAACACCATCAGTAGGGAGAACAAAAACCGGTTCTGAGACTA
AATGTATTTCTTGAAACTCTCTTTGAGAATCACTATTGCTTGATGAAAATGTAACACCTA
AAACAACAATTTCAACAGTGGTTGTTAATACAAGTAAATATTTAACAAAATTCTGAAATA
CTCCTGGTTTTGGTTTGACTAAGCCCACACTGACTATTGTTTCTCCGAGACCATCGAAAT
ATGCAACATCGGTCCCATGCTCAAATGCCCACACATAGATATTGCTATCTATTGCTAGCC
ATACCCTGCTTATTTCTGGGAACACTCCCATCAAACAATGACACTGCATATGAGCAAAGT
GTTCCATTATCTCTGGCGGTAGAGGAACTTTGTTTTGAATCTTTAACTGTGACAAGTTTG
GATGGTTCAACAATGCTGCAAGGTTCCGATAATCTCCAGTATTCAATCCACTGCATGTTG
GACTGCGTTGCGCTGTTACCCCAGTTAACTCTAAAAAGGAAGGGCGCGAATTATCAAAGC
TTATGTACCGGTCAAGCGTACAGCCAGCCATTTCCAATGATTCAAGTTGCATTTTGCAAG
TATTTATTTAAAACTTAAGCAATAGTAATATCTTCAGTCACTTGTGAATCAAATTCATTA
TATTTTTAGAAGAAACATAAAACTTGGGGTTTATTTATCGCGAAGTCAATTTATTTTAG
(7079 bp)

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