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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26605_c1_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_polypyrimidine_tract-binding_protein_2_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0021510 P spinal cord development
GO:0021549 P cerebellum development
GO:0030426 C growth cone
GO:0033119 P negative regulation of RNA splicing
GO:0036002 F pre-mRNA binding
GO:0043025 C neuronal cell body
GO:0044822 F RNA binding
GO:2000177 P regulation of neural precursor cell proliferation
Transcript
Level		FPKM:2.37 TPM:2.00
ORF EntryO_TrvaMG13342_complete:A_TrvaMG_comp26605_c1_seq4
Sequence
(Nucleotide)
CTTAGAACAATAGTGTATGTTATATTAAAGTGCCCAAAGTTTAATTGCCGACGACATCTA
GCGGCTGGAAGCCATTGCGTGAAATGGTTAAGAGAGGCTCCGACGAGCTTCTGTCGCAGA
GTGGCGTCACCGTCATGGCGCCCGCCGCTCCGCACCATGCCGACAACAACAATCAAGACT
CTGCTGCCAAGAAGGTTAAACTGGAACAGAACGTCGGCAAGCCGTCTCGTGTCATCCACA
TACGGAACATACCGAATGAAACGACAGAGGCGGAGATTATACAGCTCGGGCTGCCCTTCG
GAAGAGTCACTAATGTATTAGTGCTCAAAGGCAAAAACCAGGCATTCCTTGAGATGGCCG
AGGAGATATCCGCGGTGGCAATGGTCGCGTATTTCGGAGGATGTGTAGCTCAATTGCGCG
GACGAGCGGTCTACGTTCAGTTTTCAAACCACAAGGAGCTCAAGACGGACCAAACTCACA
GCAATGCCTCGGCATCGGCGCAGGCGGCATTACAAGCAGCGCAGGTGATTTCGAACAGCG
CTGGAGCTGCCATTGTTGCTGGTGGAGGCAACGCTTTACAACCTGCAAACGGGGGTACTG
AAATACAGGGCGGCCCCAACACGGTGCTTCGTGTCATAATAGAACACATGCTGTACCCAA
TCGTCCTGGATGTACTCTATTCCATCTTCCAGCGTTACGGGAAGGTGCTCAAGATTGTCA
CATTCACTAAAAACAATTCATTCCAAGCACTAATTCAGTATCCAGATACGGTGTCGGCGC
AAACTGCGAAAACGGCACTCGACGGGCAGAACATTTACAACGGGTGCTGCACACTCCGCA
TCGACTACTCGAAGATGACCTGTCTCAACGTGAAGTACAACAATGACAAGTCCCGGGACT
ATACCAACCCGACGCTGCCGTCCGGGGATGGAGACGCCCACCAGCTGTTGACCAGTGGAG
GTGTATTAGCCCCGCAGTTCCTGGGCTTAGGATCTGGTTTGGCATCGCCCTACGGAGTAG
GTGTCGGTGGCGTAGGACTTCCAGCTTTTGGAGCCCTCACACTGACTCCCGCCTCGCCAG
CTCTGCGAGCCTTAACCGCTCCACCTCTACCACTAGCCACAGTGCTACTCGTATCCAATC
TCAACGAAGAGATGGTCACGCCTGACGCTCTCTTTACCCTTTTCGGCGTGTATGGTGACG
TCCAGCGCGTGAAGATTCTTTACAACAAGAAGGATTCTGCTCTTATCCAAATGGCGGAAC
CGCATCAGGCTCATCTAGCCATGACTCACATGGACAAGCTGCGCGTGTTTGGTAAGGCGA
TGCGCGTGATGCTCAGCAAGCACCAAACTGTGCAACTCCCTAAAGAGGGACAACCCGATG
CTGGACTTACCCGGGACTATTCCCAGAGCCCGCTGCATAGATTCAAGAAGCCAGGCAGCA
AAAACTATCAGAACATCTACCCGCCGAGTGCCACACTGCATCTCTCCAACATTCCAGCCA
CCGTGTCTGAGGAGGATATCAAAGATGCATTCTCCAAGCGAGGATTCACAATCAAGGCAT
TCAAATTCTTCCCGAAAGACCGTAAAATGGCTCTGGTCCAACTTCCGTCGATCGACGACG
CCGTGACCGCTCTCATCAAGATGCATAACTACCAACTATCCGAGTCCAACCACCTCAGGG
TGTCGTTCTCTAAGTCCAGCATCTAAACGGATATCACGAAGGCTGGATCGCATTAGCGGG
ATACGGCGAATATTCGTCTTAACGCGATAACTGTGGGAAGTTAAAACTGGTTTCTGTACA
CGGTGTTTTTAGCGCATCAACGCGGCTCGAATTTTCGCCCGCTAATGTGGTCTAACAGTA
CACGGAATATCACACAATATTTGACAGTCGCTTGTAGGATAATAAGAATTGGAGTCGTGA
TTGGCAGAATTGTAAGTAGCAAGATTTTTAATTCAACTTTTTTGTTAAATTGACGGGTGG
ATTTTGGATTCCAAAGCAGATTTTCATCTATAGCAAGACTTTCTGTTGACGAAATTGGAT
CATTTTTTAGTTCACGAATAATTTTCCGTACTTTTATATGATTTTATTACAAATTTTAGT
TGATTTTTGCTCCGCTCTCTGCCTCTCATGACTTCAATTGAACGAATCCAAACGTCGTTT
TAGTTAATAAATATAATATTTTAGGTTGTATCGACGTCGATTCGAGTCCCAGTGTTAAAG
CATATCAATAAATGCGACTGTCTATATTTACCTCTCTAACAAATCGAGAATTTTCCACTC
GACTGAAAATATTAATTATATCTGTTACGCTTACTCGGATCAGTCTATAGATTAAGTGCT
ATTCTATTTTCTTATATGAATAACATTTAATTGTTACAATATATTATATCTAAGGAATCA
ATATTCACAAGTCATGCTTGTTTAAAATCATTTCTCATTTCATCTGCACCGGAGAGGATT
TCTATTTTGTGTGATATTCGTCCTAATTTTAA
(2492 bp)

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