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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26605_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_polypyrimidine_tract-binding_protein_1_isoform_X2_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0021510 P spinal cord development
GO:0021549 P cerebellum development
GO:0030426 C growth cone
GO:0033119 P negative regulation of RNA splicing
GO:0036002 F pre-mRNA binding
GO:0043025 C neuronal cell body
GO:0044822 F RNA binding
GO:2000177 P regulation of neural precursor cell proliferation
Transcript
Level		FPKM:0.93 TPM:0.78
ORF EntryO_TrvaMG13340_complete:A_TrvaMG_comp26605_c1_seq1
Sequence
(Nucleotide)
GTCGGACGCTCGGCTTCGCAGTCGCCGACTTTACTATTCTTCGTTTCTTTTCTTTTCTAT
TCGTTTAATTTGTCACTCGAACTTCGCGCCACTTCAAACATGTTATTCTTCGTCGATACA
GAGTGAGTTCGGGTGTCACAACAGTTTTGTTTTGACAGTCAAGTGTAAACGGAGTTTTTG
AAGTGTTTTCAAAACGCATACGGCCTTCGTTTAATGCAGATTTAGCCGGCTTATCGTCAA
AAAGTGCATTATAAGTGATTAAACGGAATAAAATAGCGTGGGAACTTGTTTATCTGGTCG
TTTAAAAGTTGCGGTAAGAGCGCGCCCGGGAAAAAAGTTTTCCGGAGTTGTTCCAATTGG
ATTCTTCAGGGAAACTAGTGTTTTGTGTGTACTGGTGTTTGGAAGGAAGTGCCCACAACT
TAAACATAACCTATTTTGAAAGTCGGCGCGTGTTGTACGAGCATGCGCACTTGGGGTCAT
TGAAATTGTTAATAAGTGGCCCTTAATTTTATAAACAAACTGTGACAGTGTAACGAAGTG
GAGTGAGTGAGTAGCTTAAAGTGTACGAGAGCATCACATTCTCATCAAGATTTGGATTTC
TATTACATAAAGGATATCATACACCTGTGGGATTCCTGTTTACCTGCGCGCGCACTGATT
TCTTTACAAAGGTTGGCGCAAATATGATGTCCTGTCCTTTGCCACTGCCGCTGTTACCGG
CGTTGCATCCGCAGCCTGCGTTGGCGTCAGACTTCCCCATCCACATCGGAATAAAGAGAG
GCTCCGACGAGCTTCTGTCGCAGAGTGGCGTCACCGTCATGGCGCCCGCCGCTCCGCACC
ATGCCGACAACAACAATCAAGACTCTGCTGCCAAGAAGGTTAAACTGGAACAGAACGTCG
GCAAGCCGTCTCGTGTCATCCACATACGGAACATACCGAATGAAACGACAGAGGCGGAGA
TTATACAGCTCGGGCTGCCCTTCGGAAGAGTCACTAATGTATTAGTGCTCAAAGGCAAAA
ACCAGGCATTCCTTGAGATGGCCGAGGAGATATCCGCGGTGGCAATGGTCGCGTATTTCG
GAGGATGTGTAGCTCAATTGCGCGGACGAGCGGTCTACGTTCAGTTTTCAAACCACAAGG
AGCTCAAGACGGACCAAACTCACAGCAATGCCTCGGCATCGGCGCAGGCGGCATTACAAG
CAGCGCAGGTGATTTCGAACAGCGCTGGAGCTGCCATTGTTGCTGGTGGAGGCAACGCTT
TACAACCTGCAAACGGGGGTACTGAAATACAGGGCGGCCCCAACACGGTGCTTCGTGTCA
TAATAGAACACATGCTGTACCCAATCGTCCTGGATGTACTCTATTCCATCTTCCAGCGTT
ACGGGAAGGTGCTCAAGATTGTCACATTCACTAAAAACAATTCATTCCAAGCACTAATTC
AGTATCCAGATACGGTGTCGGCGCAAACTGCGAAAACGGCACTCGACGGGCAGAACATTT
ACAACGGGTGCTGCACACTCCGCATCGACTACTCGAAGATGACCTGTCTCAACGTGAAGT
ACAACAATGACAAGTCCCGGGACTATACCAACCCGACGCTGCCGTCCGGGGATGGAGACG
CCCACCAGCTGTTGACCAGTGGAGGTGTATTAGCCCCGCAGTTCCTGGGCTTAGGATCTG
GTTTGGCATCGCCCTACGGAGTAGGTGTCGGTGGCGTAGGACTTCCAGCTTTTGGAGCCC
TCACACTGACTCCCGCCTCGCCAGCTCTGCGAGCCTTAACCGCTCCACCTCTACCACTAG
CCACAGTGCTACTCGTATCCAATCTCAACGAAGAGATGGTCACGCCTGACGCTCTCTTTA
CCCTTTTCGGCGTGTATGGTGACGTCCAGCGCGTGAAGATTCTTTACAACAAGAAGGATT
CTGCTCTTATCCAAATGGCGGAACCGCATCAGGCTCATCTAGCCATGACTCACATGGACA
AGCTGCGCGTGTTTGGTAAGGCGATGCGCGTGATGCTCAGCAAGCACCAAACTGTGCAAC
TCCCTAAAGAGGGACAACCCGATGCTGGACTTACCCGGGACTATTCCCAGAGCCCGCTGC
ATAGATTCAAGAAGCCAGGCAGCAAAAACTATCAGAACATCTACCCGCCGAGTGCCACAC
TGCATCTCTCCAACATTCCAGCCACCGTGTCTGAGGAGGATATCAAAGATGCATTCTCCA
AGCGAGGATTCACAATCAAGGCATTCAAATTCTTCCCGAAAGACCGTAAAATGGCTCTGG
TCCAACTTCCGTCGATCGACGACGCCGTGACCGCTCTCATCAAGATGCATAACTACCAAC
TATCCGAGTCCAACCACCTCAGGGTGTCGTTCTCTAAGTCCAGCATCTAAACGGATATCA
CGAAGGCTGGATCGCATTAGCGGGATACGGCGAATATTCGTCTTAACGCGATAACTGTGG
GAAGTTAAAACTGGTTTCTGTACACGGTGTTTTTAGCGCATCAACGCGGCTCGAATTTTC
GCCCGCTAATGTGGTCTAACAGTACACGGAATATCACACAATATTTGACAGTCGCTTGTA
GGATAATAAGAATTGGAGTCGTGATTGGCAGAATTGTAAGTAGCAAGATTTTTAATTCAA
CTTTTTTGTTAAATTGACGGGTGGATTTTGGATTCCAAAGCAGATTTTCATCTATAGCAA
GACTTTCTGTTGACGAAATTGGATCATTTTTTAGTTCACGAATAATTTTCCGTACTTTTA
TATGATTTTATTACAAATTTTAGTTGATTTTTGCTCCGCTCTCTGCCTCTCATGACTTCA
ATTGAACGAATCCAAACGTCGTTTTAGTTAATAAATATAATATTTTAGGTTGTATCGACG
TCGATTCGAGTCCCAGTGTTAAAGCATATCAATAAATGCGACTGTCTATATTTACCTCTC
TAACAAATCGAGAATTTTCCACTCGACTGAAAATATTAATTATATCTGTTACGCTTACTC
GGATCAGTCTATAGATTAAGTGCTATTCTATTTTCTTATATGAATAACATTTAATTGTTA
CAATATATTATATCTAAGGAATCAATATTCACAAGTCATGCTTGTTTAAAATCATTTCTC
ATTTCATCTGCACCGGAGAGGATTTCTATTTTGTGTGATATTCGTCCTAATTTTAA
(3176 bp)

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