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Last updated: 2022/11/18
NameA_TrvaMG_comp26600_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)
PREDICTED:_LOW_QUALITY_PROTEIN:_DNA-directed_RNA_polymerase_II_subunit_RPB1_[Bombyx_mori]
Ontology
GO:0001055 F RNA polymerase II activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
Transcript
Level
FPKM:14.70 TPM:12.38
ORF EntryO_TrvaMG13268_5prime_partial:A_TrvaMG_comp26600_c1_seq1
Sequence
(Nucleotide)
GCGACGGCGAATGATTCGAAGGCGCCTTTGCGCCAAGTAAAAAGAGTACAGTTTGGAATA
CTATCTCCAGATGAAATCCGACGTATGTCAGTTACCGAAGGAGGGATCCGATTCCCGGAA
ACCATGGAAGGAGGAAGACCGAAACTTGGAGGTCTTATGGATCCTCGACAAGGGGTGATT
GACAGAAATACACGATGCCAAACCTGCGCTGGAAACATGACGGAATGTCCAGGACATTTT
GGTCACATTGATTTAGCTAAACCTGTATTCCACATTGGTTTTATAACAAAAACAATAAAG
ATACTTAGATGTGTTTGCTTTTATTGTTCAAAGCTGCTTGTCAGTCCAACAAATCCAAAG
ATTAAAGAAGTTGTGATGAAGTCAAAAGGTCAACCTCGTAAAAGATTAACATATGTATAT
GATCTATGCAAAGGAAAAAACATTTGTGAGGGTGGAGAAGATATGGATATTGGAAAAGAA
GGCGAGGAAGGAAAAAGAGGTTCTGGACATGGTGGTTGTGGACATTACCAACCATCCATC
AGAAGACAGGGATTAGAACTTACAGCTGAATGGAAACATGCCAATGAAGACACACAAGAA
AAGAAAATTTTTGTCTCTGCAGAAAGAGTATGGGAAATTTTGAAGCACATAACAGATGAA
GATTCATTTATTTTGGGAATGGATCCAAATTTTGCAAGACCTGATTGGATGATTGTCACA
GTTTTACCTGTTCCACCTTTGTCCGTGCGTCCTGCTGTAGTAATGTTTGGATCTGCCAAA
AATCAAGATGACTTGACTCACAAATTAGCTGACATAATTAAAGCTAATAATGATTTAGAG
AGAAATGAGCAGTCTGGTGCAGCTGCTCATGTTTTAGCTGAAAACATAAGAATGTTGCAG
TTTCACGTTGCTACATTTGTTGACAATGATATGCCTGGCATGCCCAAAGCTATGCAGAAA
TCAGGAAAGCCCCTTAAAGCTCTCAAAGCCAGATTAAAGGGCAAAGAAGGAAGAATCCGA
GGTAACCTAATGGGAAAACGTGTGGACTTCTCAGCCAGAACTGTAATCACTCCTGATCCT
AATCTGCGTATAGATCAAGTTGGAGTACCAAGATCTATTGCTCAAAACATGACATTCCCA
GAATTGGTCACTCCTTTTAATCTTGACAGAATGCAGGAACTTGTGCGCAGAGGGAATGCA
CAATATCCTGGTGCTAAATATATTGTCAGACAAAATGGAGAACGTATTGATTTACGATTT
CATCCTAAATCATCTGATTTGCATTTACTGTATGGTTACAAAGTAGAAAGACATTTAAGA
GATGATGATCTGGTTATATTTAATCGGCAACCAACACTACACAAAATGAGTATGATGGGT
CATCGAGTTAAAGTTCTACCGTGGTCAACATTCCGAATGAATTTAAGTTGCACATCTCCT
TACAATGCTGATTTTGATGGAGATGAAATGAATTTACATGTTCCTCAGTCTATGGAAACA
AGAGCTGAAGTAGAAAACATTCATATCACTCCTCGACAGATTATCACTCCACAGGCTAAT
AAACCTGTAATGGGTATTGTACAAGACACACTGACTGCTGTAAGAAAAATGACAAAGAGA
GATGTATTTTTGACCAAAGAACAAGTAATGAATCTTCTAATGTTTCTCCCAACATGGGAT
GGTAAAATTCCTCAACCTTGTATTTTGAAACCACAACCATTGTGGACAGGCAAACAGATC
TTCACTTTGATTATTCCTGGCCCTGTAAACATGATTCGGACACATTCCACTCACCCAGAT
GAAGAAGATGATGGTCCTTATAAATGGATATCACCTGGAGACACAAAAGTTGTGGTAGAA
CACGGAGAACTGCTGATGGGTATTTTGTGTAAAAAATCTCTTGGTGCATCAGCTGGTTCT
CTGCTACATATTTGCATGTTGGAATTGGGTCATGAAACTGCTGGTCGATTCTATGGTAAT
ATTCAGACTGTCATTAATAACTGGCTATTGTTGGAAGGTCACTCAATTGGTATTGGTGAC
ACTATTGCTGATCCCCAAACATATCAAGAAATTCAGCGTGCCATTGTAAAAGCCAAAGAT
GATGTAATAGAGGTTATTCAGAAAGCCCACAACATGGAATTAGAACCTACTCCTGGTAAT
ACTTTGAGGCAGACTTTCGAAAATCAAGTGAACCGCATCTTGAACGATGCTCGTGACAAA
ACTGGTGGATCTGCTAAGAAATCTTTGACTGAATACAATAACCTCAAAGCTATGGTGGTA
GCTGGTTCAAAAGGTTCGAATATTAATATTTCCCAAGTTATTGCTTGTGTAGGACAACAA
AACGTTGAAGGAAAGCGAATTCCGTTTGGATTCAGAAAACGTACTTTGCCACACTTTATC
AAAGATGATTATGGTCCTGAGTCTAGAGGTTTCGTCGAAAACTCGTATCTTGCCGGTCTG
ACACCCTCTGAATTTTATTTCCACGCCATGGGAGGACGTGAAGGTTTGATTGATACTGCT
GTAAAAACCGCCGAAACTGGATATATTCAACGACGTCTCATAAAGGCTATGGAGTCTGTA
ATGGTTCATTATGATGGAACAGTTAGAAACTCTGTTGGGCAACTTATTCAATTGAGATAT
GGTGAGGATGGCTTGGCAGGAGAAACAGTGGAGTTCCAGAATTTGCCAACTGTTAAATTA
TCAAACAAAGCATTTGAGAAGAAATTCAAGTTTGATTCTTCAAATGAAAGATATCTGAAG
AGAATTTTCAATGAAGACATAGTCAGAGAGCTTACAGAATCTGGAAATGTAATTGCTGAT
CTTGAAAGGGAGTGGGAACAACTTAGTAAAGACAGAGAAACATTGCGACAAATTTTCCCA
ACTGGAGAATCTAAAGTTGTATTGCCATGTAACTTCAAGAGAATGATTTGGAATGCTCAG
AAAACTTTCCACATAAACAAAAGAGTACCAACAGATTTAAGTCCCATTAAAGTCATTAAG
GGTGTATCTGATCTCTTAAAGAAATGTGTAATTGTAGCTGGTGAAGATCGCCTGTCTAAA
CAAGCCAATGAGAATGCTACATTACTCTTCCAGTGTCTTGTGAGATCAACATTATGCACT
AAATTTGTATCAGAAGAACACAGATTATCCAGTGTAGCTTTTGAATGGCTCATTGGTGAA
ATAGAGGCCAGATTCCAACAAGCGCAAGTTAATCCTGGTGAAATGGTAGGTGCATTAGCT
GCTCAATCACTTGGTGAGCCTGCCACTCAGATGACACTGAACACTTTCCACTTTGCTGGT
GTATCATCCAAAAACGTAACACTTGGTGTACCTCGATTGAAGGAAATCATCAATATTTCA
AAGAAACCAAAGGCTCCTTCTCTGACTGTATTTTTGACTGGTGGAGCTGCCAGAGATGCT
GAGAAAGCCAAAAATGTGCTTTGTAGGTTGGAACACACTACCTTGCGTAAAGTTACTGCT
AACACAGCTATTTACTACGACCCTGATCCTCAAAATACTGTCATTGCTGAAGATCAAGAG
TTTGTTAATGTTTATTATGAAATGCCTGACTTCGATCCAGCAAAGATTTCACCATGGCTA
TTACGTATCGAGTTAGATCGTAAGAGAATGACTGACAAAAAATTGACTATGGAACAGATT
GCTGAAAAAATTAATGCTGGTTTTGGTGATGATCTGAATTGTATATTCAATGATGACAAT
GCTGAGAAATTAGTGTTGCGTATAAGAATAATGAATAATGAAGAAAGTAAGTTCCAAGAC
AATGATGAAGAAACTGTTGACAAGATGGAAGATGACATGTTCTTAAGATGTATTGAAGCA
AACATGTTATCTGACATGACATTGCAAGGTATAGAAGCCATTGCAAAGGTATACATGCAT
TTACCACAGACAGAAGCTAAAAAACGTATAACTATAACTGAACAGGGAGAGTTCAAAGCT
ATAGCAGAATGGTTATTGGAAACTGATGGTACATCGCTTATGAAAGTACTTTCGGAGCGT
GATGTTGATCCAATCAGAACCTTCAGTAACGACATTTGTGAAATATTCCAAGTACTTGGT
ATAGAAGCTGTACGAAAATCGGTAGAAAAAGAAATGAACGCTGTCTTGCAGTTCTACGGT
CTGTACGTAAACTACCGACATTTGGCGTTGCTTTGTGACGTAATGACAGCTAAAGGTTAC
CTTATGGCCATCACACGTCACGGTATCAACAGACAAGACACTGGTGCACTCATGAGATGT
TCATTTGAAGAAACTGTGGATGTTTTATTGGACGCGGCTAGTCACGCCGAAGTAGACCCT
ATGCGTGGAGTATCCGAAAATATTATAATGGGACAGTTGCCTAGAATGGGTACTGGTTGT
TTTGATTTATTACTTGACGGCGAAAAATGCAAAGAAGCTATGGGTGGACTTGGAGGTGCC
GAAGTTGGAATGTACTTCGGCGTTGGCACTCCATCTATGTCGCCACTCATGACCCCATGG
TCAACACAGAACACACCTGGATATGGAAGCAGTGTTTGGTCACCATGTCAAGTGGGCAGC
AGTATGACTCCTGGAGGACCATCATTCTCACCATCGAATGCGTCGGACGCTTCTGGACTG
TCACCAGCATACAGTAATGCTTGGTCACCACAACCTGGGTCACCGGGATCTCCCGGACCT
CCCCTATCGCCCTATGCTTCACCGTCGGGCGCGTCTCCATCTTATTCCCCGTCAAGTCCC
GTGTATGCTCCCGCTTCTCCAAGTATTACTCCGACTTCCCCACACTACTCTCCAGCAAGT
CCATCTTATTCGCCAACGTCTCCCAATTATTCCCCAACGTCGCCAATATATTCACCGACT
TCGCCAAGTTATTCGCCAACGTCACCTGGATATTCGCCTACATCTCCCTTGTATTCTCCA
GCGTCTCCAAGATATTCGCCGTCGTCTCCAAACTATTCACCGGCCAGTCCGACTTATTCG
CCAACTTCGAGTTATCCAACAACTTCACCAAGTTATTCTCCCTCGAGTCCTTCATATTCT
CCAAGTCCCTCGTATTCTCCAACTAGTCCAGGTTATTCCACATCACCTGGTTACTCGCCG
TCGTCGCCTAGATATTCACCGAACAGTCCTGTTTATAGTCCTAATTCGTCAAGTTACTCT
CCATCTTCTCCAAATTACGCGCCAGGATCTCCGACATATTCGCCGTCGAGTCCTACCTAC
TCACCCACGTCACGTTCTTATTCTCCATCGTCACCAAACTATTCACCATCATCTCCGAAT
TACTCTCCATCTTCACCGAACTATTCTCCAACCTCGCCGTCTATATCGGGAGGCTCCCCT
ACATATTCACCGTCCAGTCAACAATATTCTCCTGCTAGTCCACAATACTCGCCGACTAGT
CCAGGCTACTCGCCAGCGTCACAAATTCCAGGCAACACTAAATACTCGCCGTCTTCGCCG
AACTACTCCCCATCGTCACACAACTATTCGCCCTCGTCGCCAAGATATTCCCCCGGTTCA
ACTAAATATTCACCAACATCGCCAACATTTACCCCAACATCACCAAATTATTCCCCAAGC
TCCCCTGCATATTCTTCGACAGGTGGACCGTCCACCTACTCCCCTACTTCACCGACTTAT
TCTTCTACTTCTCCTAATTATGATGATGATGATAATTAAATGTAAAATGTTAACTGTGTG
TTGTAAATGTAATTTTTATTTTCTTAAATTTTATTTGGGTAACGTTATTACGATTAGAAT
AAGTTTGTATGATTCTATAAGATATTATATTCCTTTGATACTCTCGTAACGAGAATTACA
CATTTCAAAATGAATGTGTTGCAAATTTTAGCATGTAGGAACAATAAAATAAGTGTTGTA
ATAACAATAAAGTTATTGATGATTAAAAATAAGTGATAATTATTGCATTTCCTTATGAAT
GCATTTTCCTATACAATAATTATTGATCATAATAGACTTAATTACTATCGAAGTGATTAA
TGGATGATTTTCACTTACAGTAAATGAATAAAAGGGTTTTTTTGGTATTATTGCTTTTAA
AGTTTAACGGTTTCTGTACCGAGTTTTTTGGATATTTAATTTTTAATATGGAGTACCTAT
TTAGATTTATACATTCTCGTTGGTCGTTTCCATTCAGTTCAAATGGCACAGTAATCCTTT
GTTTCTCGAGGTGCATTCGATTTCATTCCTACAATGTTGAATAAAAAAAATCATATAATA
CAAAATACGTAGTCGATCTGATGTTTAGTAATGAAAGGAATAATATGATAATCATCCATT
ATCATTGTGAACGTAAAAAAAACAAAAAAAAGTGTTATCTTAATTAATATTTTAGATCAT
ACTGGGAACTCGTTATACAGGGTGGATTTGTAACTT
(6396 bp)

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