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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26560_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_SH3RF1,_partial_[Bombyx_mori]
Ontology
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030027 C lamellipodium
GO:0042995 C cell projection
GO:0046328 P regulation of JNK cascade
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:1.34 TPM:1.13
ORF EntryO_TrvaMG13137_5prime_partial:A_TrvaMG_comp26560_c1_seq1
Sequence
(Nucleotide)
GTGACACCTGTGATGATAAGCCATGAAATCGATCCATTCAGACAAAAGCAAAAAGCTTAA
CATCCCCGTTATCACTAGTACGAACCCAGCATTCGTTTTCGGGTCTTCATACACCCTGTA
TAGTATTTTTACACATTAACTTTTTAGAAAAATGGACTCTTCGCCGCTGTTATCTAATAG
AAAAAGCTGCCGTAGCCGTAATACATACGTCATTCCATCGGGCAGCTCTGTACGAAGGAA
GCCGGGAACAGTCCTGTTCGTCCATTACGCTGTAGAGTACCTTTGTACCAGCCGTCGCCG
CGTTTCTTTGAGACGATAACAATATCGTCAATTTTTAATTCTAGCTCGTATTCCGAATTC
GGTGGGTAGGGAACTATGCAGCGGAATCTTTCTTTGACAGTTTGAGAGTGATGTCGGTCC
TTCTTCGTAGCTGTCACGTCGAGAGACTGCGACTTCCTGTGTTGGGTTTGCCATGGACTC
TCATTGGACCTGACATGCTGCGGGTGCAGAGGTACATCCAGCAGCCGCGAGGGTCCGTCC
TCGAACACCGGGTTGTCGATGCTGTAGGCGGCGGGTGGTGGAGACTTGCACTTCTTCATG
GCGGCCCAGCGCTTCATCAGACTGACGCCGCTCGATAGAGAACACTTGTCCGGTTTCGTT
TTGTCTTTCGCCTTATCAGATCTCGGTGTGGTTTGCTGCAGTGATTGAGCGTTCCACGGA
TAAGTGAGAGGCTGAGCTTGTGCGAGGACCGGCGAGGGAGCCCTAGGGGGCGCGTCGGGC
GGGGGCGGAGGCCCTGACGTCAGCACCTTCACACCCGATACACTCTTATCATGTTTAGTT
CTATGCGGTGCTACATAGTTCCCGGGGAACACTCCCGCGCGCTGGTTCCTCTCCGAGAAT
CCCTTGTACCAGCCGTCTCTACAACGTTCTGTTACTGTGTACACCACTCCTTTAGTGAGC
TCCAGTTCGTCAGGTTTGTGCGGTTTGTATGGATACAGCGCGATGTAGTGCGCGGGCAGC
GGCCGCTCGCTGGACCGGGAGCGGCGCCGTCTGCGGCCCTCCGGCGCCGCGTCCAGCAGG
CTCGTCGCCAATATCTCCGCTGAGTGTCTATTCTGCGTATTATGATTACTCTGCAGATGC
GTCGACGGCGTCAAACTGTGTCTCTTCTCTCTGTGTTCTCTATGGTTCCTCATGTAGTTC
CCGTCTTGTCCGTGAGAGGGCGACAGCGCCGCTTGGAGCCCTAACCCGAAATTCAACAAG
GAATCCGGTCCACTGGGCCTGACTGTCTTACTAGACGAAGGGGCATCCAGTCCAACCTCA
GTCTCCTCATTATTCAATTTAGGGCTCTCCGATGGGGGCAAAGTCACGTTCAATGATGTA
TTAGTGGCCGTTGAGCTCTCATTTAAACTTAGGACACCTAACGATGAGTTGAGTTCGTTT
TCTGGCATCGGTCGTTCAGTGTTGTTGTCTGGTGAAGACGGTAGACTTGGCTCGTTGCTC
TCACATGTGCTGGTGTCTGAACTTGTGTTGGGTGTTGTGTTGGTACTTGCACCGACTGAC
GGGGTGTTCACACTGGAACTGGAGTCAGAACTTTGATTGTTGGACACCGGAGCTCTTATA
TTTTGGTATGTTGAGTCGACTTTGTGCACCGGAGTCGAATTATAATCGAATTTGACTCGC
ATTCTATCGTAATTCACATCACTGATACGTGAAACACTCTGTATACAAGCTCCTTTGTTA
AAATGTATCAGATCTAGGGAATTCTTGGCCTGTTGCTCGATTATGTTTCTCGGTGGCGTT
GTGATGAGGCCGGAGTGCGTGGCCAATATTTGCGGTTGTTGGACCAATAGTGTGGGGTGG
TAGTTGGGGTGCGATTGGCTCATGTTGGCCATGTTTTGGTAGTTGGCTTGCGATGTTGCT
GGCGTTGAAACTGACATCGGTTGGTATCTATGTGGGTGTTGTGAGTGATGTCTGTGTTCA
GAATGGCCGGCTCTTGCTTGTTCTGGTATCGGTGGTACGGGACGGTTTAAGGGTGTACAG
TTAATTAGTTGTCTGGCAGCTTGGTTGAGTTCCACGAAGGCTATAGGAAAGATCCCGATT
CTGTTATCGAGTCTCCCTTCAGCCCAGTTGTCATCAACGCGACGGTGCACCGTTATTATT
GCTCCTTTATCGAAAGCTAGGCATCCTTCTTCATCAGGGGCTGACATTCGGAAGTCGTAC
AACGCTTTGCAAAGAGCTGTCGCTACAGGTAATTGGACGACAACCTGCACAAAAGTGATC
GGAAACATTCCAGTTCGCCCGGAACATTCACCTTGATACCAGAACGCGTCCAACTTCTTC
TGCAGCAATATCGTTTCGCCTTTCTTGAACGATAGATCTCCAGGTTCCTTGGAGATATAA
TCGTACATGGCTCTGGCGTGTGGCG
(2425 bp)

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