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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26555_c1_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA_pseudouridylate_synthase_domain-containing_protein_2-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0019239 F deaminase activity
GO:0031119 P tRNA pseudouridine synthesis
GO:0044822 F RNA binding
Transcript
Level		FPKM:1.28 TPM:1.08
ORF EntryO_TrvaMG13114_complete:A_TrvaMG_comp26555_c1_seq2
Sequence
(Nucleotide)
CTCATACATAAATTAAACTAGTAGGGTGAAAAAGATAACGGCAAAAACATTATTCTATCC
TGTGAGAAGAGGAAGGCGGACGATAGTGATATCAATAAAGACTTAAAAAAGGCAAAATTA
GAAACGAAGGCTTTAAAAGCGAAGAGGCCTGGCTTCACTGACGATAGATATAACGAGACC
TCATACTACATTGAAAATGGTCTAAGAAAAGTATTCCCTTACTATTTCACGTTTACAACC
TTTACGAAGGGCAGATGGGTCGGCGAGAAGATTCTCGATGTCTTCGCAAGGGAATTCAGG
GCCCACCCGGCAGCTGAATACGAAAGATGCATCAGGGCAGGAACCCTGACGGTCAACTAT
GAAAGCGTAGACCCTGATTACAGACTCAAGCATAATGATCTACTTGCGAACGTGGTACAC
AGGCATGAAGTACCGGTCACCAGCCAACCGATCAACCTCGTTCATATCGATGAGGACATT
GTGGTTGTCAACAAACCGGCCTCAATCCCCGTGCATCCGTGCGGTCGCTATAGACACAAT
ACGGTTGTGTTCATCCTCGCCAAGGAATATAACCTGAAGAATTTGAGGACAATCCACAGA
CTTGACAGGCTTACATCAGGGTTACTCCTATTCGGGAGAAGTCCGAAGAAAGCGAGACAA
ATGGAACATCAGATTAGGAATCGACAAGTCCAAAAGGAATACGTCTGCAGAGTCGACGGA
GAATTTCCCGATGAGGAAATAGAATGCACGGAGCCGATAGAAGTCGTCAGTTATAAGATA
GGTGTGTGCAAGGTTTCGCCTAAGGGTAAAGACTGTTCCACTGTCTTCAAACGGCTTGGA
TTCAACCCAGCAAATAACACCAGCGTCGTTCTGTGCCGCCCCAAGACCGGCAGAATGCAT
CAGATTAGAGTGCATCTGCAGTATCTGGGTTACCCAGTAGTAAACGATCCCCTCTACAAC
CACCCAGTGTTCGGTCCTCTCCGCGGTAAGGGAGGTGACACTGGAGGTAAAACTGATGAA
CAACTAGTCAGGGACCTTATAGCCATCCACAACGCTGAGAACTGGCTTGGCGTTGACGCT
GCTGATGACGATTTACTGTTTTCGAAGCCGGTATCTGATGATAAAGTTGGTGAAGATGAC
TGTGACACGGGTCCGGCTTCAAGGGAATCATCTCCGAGATTAGATTCTCCAGCACCAGGA
GTCACGCCTTCATCTGTGATGACGCTAACCATGCCTAGTCCTTCAAGCGGTGCCGAAGCT
CCGGGTGAACCATCAACGTCGCCCGCTCCACCTTGCACCATGGCTCCATCGCCGACAGCA
TCACTCGCCATGAATGAAGACTCGAACGATGCTAAGTCGGATAAAGTGACAGTGGCCACT
CAGACGGGGTGCGCGGAGCCGGGCAGCGCGCCCGCGGGGGGAGGCGGGCTGGGTAGCGCG
GGGGGCGCGGTGGGCGAGGTCATCGACCCGCACTGCTACGAGTGTCGTGTGCGGTACCGC
GACCCGCGACCCAGGGACCTCGTTATGTACCTGCACGCTTGGAAATACAAGGGCCCCGGC
TGGGAATACGAGACGGAGCTGCCACAATGGGCGAGCCTCGACTGGGAGGAGCCGGACAAC
TCATAGTCACGCGACATGGCACCACTGTGGACGCGCCTCGCGACACTACACATAGACCAT
TCAAATGAATACTAAGACCAAATTTGTAAACATTATTATAGGACTTCCGTATATAGTAGC
TTATAGAATGTTAATGTTTTGTTGTAAATTCGGGTTCGGAGTAATAAATATTTAAACTAC
CAAACGAGGTGATTGATGTTGGTACATATTGAAGGAAGATAAATAAATAAAAAAAAATTG
TTTAAATCAACATTCGTCAAAACTATCCTAAATAAAAATAATTTCGGACAATAGAGTGTT
CGCTAACAACCTCAAGTGATCTCGCGC
(1947 bp)

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