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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26550_c0_seq5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0031440 P regulation of mRNA 3'-end processing
GO:0035327 C euchromatin
GO:0045292 P mRNA cis splicing, via spliceosome
Transcript
Level		FPKM:8.66 TPM:7.29
ORF EntryO_TrvaMG13092_complete:A_TrvaMG_comp26550_c0_seq5
Sequence
(Nucleotide)
CTTAAAATTAACGAAGTGAGTGATCTAAAAATTCTAAAACATTTGTAAATTTTTACACTA
TCAATTATTAGAAAAAGCCAATGCAGATTGCATTATTCTTCACGCAAATACATTTATAAA
TCATTTTTTCACACATCACAAGTACGCTTAAATTATTTACTAGAAAAGTCTTTAACATTG
TTCTGTCCATAAGTCGCTGATTTCTTCAATACCTGTTCTTGCTGTCGGATCGGCTTCGAC
GGTCGCGTGATCGCGATCGGCGAGGGCTGGGCGATCGACGGCGTACTGACGGTGACCGAC
GCGGAGACAGCGATCTACCGCGCGAGTACGATCGACGGCGGGGGCTGCGACTGCGCGACC
TGACGAAAATAACACAATATACACATACTAGTTAACAACAGCCTGAAAACACCATCTTTA
CCTTGAGCCAATAAGTAAGTAAAGATAGTGCTTTCAATTGGCTTTTGATCACGCTTTTCA
GTTCCATTTCTCCTCTGAAATCCACTTCGGTGGAACGCGAAAATAAAGCCGCCACGTTTC
GTACCACGCTCTTGCATTGCGGTCTCAATACGCTAAAAATAACTCATCATACAAAAATGA
CTGTCTTGAATTGTTAAACTAAACTATGAGCCTGAACTCTCTACCTCCTAAAATACACCC
AAAACACCAACATAATTTAACTAAAATTTAGAAGGTATCAAAGGTAAGGTTCTAAGTATA
GGATTCAAATAGTACCGATACATGGTGGAGCCTGCGCAGATGACCGTTGCGGCTGCTATG
GGGCCGGAGGAAATAATTGAAGGCGAAGTTGGGTGATCTTTGATCTTCCGAAGGACCGGT
GTGGAAAGTTTGAGAGAGATTGCAGTACGGGAAGGTCTGCAGCCGTTAGTTGTTTGTGGC
ACGGCGGTACGAGTGCACTCGATGTGTGTTTTACTACGTTATTCGGTGCACTTGTTGTAT
CCTACTGTTTAGTTTGTGTTTTCAAATCCAAGTTGAGGTATAATTGAGGATTAGGTGACC
GCAGTGAGTAGGAGTGTAATGGGGACGCTGTCGTAGTCAGCTGCGCGCAGCAGTTGGGTG
AGGCGACCGCAGAAGTCGATCGAGATGTTGATGCAAGCGACGAGCGCGGATGTCAAATTG
GTTAACGAGCCGTAGTTGTGAAGAGATGTGGTGAGGACGTTGGTGTGTTGGTGGTTTGTT
GAATAAATGGACCTGCGATCCCTTCTTGTTCTGCCGTTTGACATCTCCACTCGAATTCTG
GTACCACAGCATCGTGTTCCGTCAAGTCCACGAACTGAATCTTCGGCGTCCCGTGGGTCT
TCAAACTCCACGAAAGCGAATCCCGGAGGATTGCGGGCCACCCATACGTTACGGATATTT
CCGTATTTAGAGAATACTTTTTCTATTTCATATTTGGAAGCGTTTGTACCCAAGTTGCCG
ACGTACACCTTGCAGGAAAGGTCCCATTCTCTGTATCGCGACATGCTGTTTTATGTAGAA
TTTTAAAAAGGATAATAAAAATTGCAAAACCACGCACTAATTTTAAGATTTAAACTGATT
AGAAACGCCTAACCACCACGAACGGCACG
(1589 bp)

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