SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26534_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_activating_signal_cointegrator_1_complex_subunit_3_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006281 P DNA repair
GO:0006307 P DNA dealkylation involved in DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0043140 F 3'-5' DNA helicase activity
GO:0044822 F RNA binding
Transcript
Level		FPKM:3.86 TPM:3.25
ORF EntryO_TrvaMG13019_5prime_partial:A_TrvaMG_comp26534_c0_seq1
Sequence
(Nucleotide)
TATCTACACATATGTAAAACAAAATGAACCCAATGCTTCAGAGTTACTTAACCTCCTTGC
ACAGCTTAAAGAGGCATGCAAGTTACTCACAGGTGACCAGCCTGACAATATCATAGAAGA
TGCTACAGTTTTAGCTTTGAGAATGTTTCTAGATCATGATATAGTGATGCTGAAACATCT
GTCACAATTGAGACAAACATTTGGTTCTGTTACATCAACTACAGCTAGCAAAATTTGTGA
AATAGTTAATCAAATATCAATAGAAATTTCAGAAGAAACTAAAGAATACATCAGAATAGA
AACAAAGGAATCTAAAAATGATGATGCTAAAATTTGGGGAGAAAACATTCAATGTCACTA
CATTCCATATAAACTGAGCAAAAGGCCACTAGCCAAATTAACTAAAAAACCTGCAACAAC
TAGCGCTTTTGTTGAAGATTTCTCAATGAAATATAACCAAAAAAATGTAAAAGTAAATGG
GTTCCAGACTCATTCATCTAAAACTCCATCGGAACCGAAGTTTGGAAAATCGTGGCTAGA
AATAAAAGTAAAAGAACTGTATGAACATGAGGCAGGAATATCTAGTGCTGATGTGTTACA
GTCAGTAATCACATTCTTAAACTCTCCAAGAAGTAATGATGATCTGCAGAATGACCTCTT
CGAATTATTAGGGTTTGATAAGTTTGAGTTTATTCAAGAGACATTGGAGCATAGACAAGA
TATCATTAATAGTCTGAAGGCCCCTCCACCACAGCCTACATTATCAGAACTTGCAGCTCA
TTTACCTGAAAACAAAATGCCACAGTACTTGTGCCAGGTGTCAGTACTTTCCGAGCAAGA
TAAAATGTTAGCTAAACTTGTGCGAAAAGAAGAAAAAAAAGCTAAGAGTTCTAGGAAAAA
TGAGAATGATGATGATGATGATGACCAGGAAATTAATATTGCACAGATGAGAGCAAGGAG
AATAGCAGAATTGTCAAAACCAGTGGTACCATTTTCGGCTTCAGCGCGATCTTCGAACAC
CGACCCAATTTTACAGAAGATATCTTATTTTCAAACTAAAGTCCATTATCCGAATGTATA
TGATTCTTCAATTGACGCCAAAAACGCTGCAGGTTTCGTATCAGGATTAAAGCTAATTTT
GCCAGAGAATGCTGTGAGAAAAGATTTGAAAGAATACGAAGAAGTAATAATACCTAAAAA
CGATCCACCTCCTTTAGAAATAGGGAACAAACGAGTTCCTATATCTGCTATGGACGAGAT
TGGTCAAATGGCGTTTGAAAACATCAAAGAATTAAATCGGATACAATCAGTGGTATACCA
AACGGCCTACAATACTAATGAGAATCTACTTATCTGTGCGCCGACCGGTGCTGGTAAAAC
TAACATCGCTCTCCTTACAGTAGTGCATCAGATAAAACAGCATATTGAAAACGATGTTAT
TATGAAGAATAAATTCAAGATAATCTACATAGCACCAATGAAAGCTCTTGCTTCAGAAAT
GACGGCTAGTTTCGGCAAACGGCTCAAGGGTCTCGGGATATTGGTTCGCGAGTTGACAGG
TGACATGAAGCTGACCAAGACGGAAGTACAACAAACGCAGATGATTGTGACCACGCCGGA
GAAATGGGACGTTGTTACGAGGAAGGGAGCCACCGACACAGAATTAGCATCAATAGTGAA
ACTGATCATAATTGATGAAGTACATTTGCTACACGGCGATAGAGGTCCTATTGTGGAGGC
CATTGTCGCTAGAACGCTACGACAAGTCGAATCCACTCAGAATATGATACGGATCGTTGG
GTTGTCGGCAACATTGCCTAATTACCTCGATGTTGCCAGATTCTTACGAGTAAATCCAAA
CGTGGGGTTGTTTTTCTTCGACTCTCGATTTAGGCCCGTACCGTTAGAACAACAATTTAT
CGGCGTCAAAGAAATCGGTAGCGGCGGGGGAGCTCATCTTCGACAGATACAACAAATGAA
CGACATATGCTACGACAAAGCAGTCGATATGGTTCAGAAAGGACACCAAGTAATGGTGTT
CGTTCACGCTCGGAACGCGACGCACCAAACCGCCTTGATATTAAAAGAATTAGCTCAGAA
AAAGGGTCATTTGAAACATTTTGAACCGGAAGACAGTGGTGGTTTCCTTAAAGCTAAGAA
ATCGATTAGTACCAGCCCTAACAAACAGTTGGGTGAGCTGTTTGCGAGCGGCTTCGCTTG
CCATCACGCTGGAATGTTGAGAAGCGACAGGAATATGGTTGAGAAATACTTTTCCGAGGG
ATACATTAAAGTTTTGGTTTGTACCTCCACTTTAGCTTGGGGTGTTAATTTGCCGGCACA
CGCTGTTATTATAAGAGGCACAGAAATCTACGATCAAAGTCACGGTACATTCGTAGATCT
AAGTATACTAGACGTGCTTCAAATATTCGGTCGCGCCGGTCGACCTCAGTTCGATTCATC
GGGCACAGGAATCATAATAACCACTCATGATAAACTGACGCACTACCTCAAGTCTATGAC
GAATCAGTTCCCTATTGAGAGCAACTTTATTAACTTGCTGGCTGATAACCTTAATGCTGA
GGTGGCGCTCGGTACTGTAACGAACATCGATGAAGCTGTTGAATGGTTGAGTTATACGTA
CTTATTCGTGAGGATGAGAATCAATCCGCAGGTATACGGTTTAACATACTCAGACGTACA
AGAAGAGCCGATGTTGGAAACTAAACGACGCGAGCTGATAACTGCGGCCGCCATGCAACT
AGACAAAACACATATGATACGATACAATGAACGAACAGGCGATCTTAACGTTACTGATCT
CGGTCGAACGGCGAGTCATTATTACATAACGTGCGAGACGATGGAAGTGTTCAACTCTAT
GGTACGCAAATCTATGACGCAGGGTTATGTCTTGGAAATGTTGACTAGGTGCTCCGATTT
TCAGCAGTTGAAGGTGAGAAAAGAAGAGCTAACAGAATTATGGCAACTTAAAGATAAATA
CTGTGAATTACGAATAGAGGACCCACCTGAAGATATTCATTGGAAAATAAATATATTGTT
ACAAACTTATCTATCTCGGGGACGGGTTAATGGGTCGTCTTTGCAGTCGGATCTTAATTA
TATCAGTCAGAACGCCGTTCGTATAATAAGAGCTCTCTTCGAGATAACACTTCGCAAGAA
CAATGCATACATGGCCGGGTTATATTTAAAGATGGCGAAAATGCTAGAACTACAACAATG
GGACTTCTACAGCGATATGAGACAATTTAATTGTTTCACTAACGAAACGTTGAAATACGT
AGAATATCCCATGTTAAAACCTGATCAAATAAGGGATATGGATTGGAAGGAGTTAGGTGA
TTTAATAAGGAATCCAAAGAACGCTCGACACATGAAGAAATGCGCGGATGAGTTCCCCTT
ACTAGAGATGGAAGCGAGTCTACATCCCATCACTAGAACTGTGCTGAGAATTAGACTCAC
AATTACACCGAATTTTAGATGGAACGACAAGTACCACGGCAAAGCACCAGAAGCGTTCTG
GATATGGGTGGAGGACCCTGAAACCGATATAATGTACTATCATGAATATTTTCTCATCAC
CAAGAAACAGGTAATAACGAACGAACCACAAGAGTTGATTATAACAATTCCCATTCAAGA
ACCGCTTCCACCGCAATACTACATTAGAGCCACTTCGGAAAGATGGATAGGTTCGGAAAG
CGTGCTACCTCTTACATTCCAACATTTAATATTACCAGAAACTCATCCACCGCACACAGA
TTTACTAGAACTACGGCCATTACCAGTGACAGCCTTAAACAATCCGTCCTACGAAATGTT
ATACAATTTCACCCACTTCAATCCGATACAAAATCAAATATTCCACTGTTTGTACCACAC
TGACAATAACGTGTTGTTGGGAGCGCCCACCGGCTCCGGGAAAACTATAGTCGCTGAAGT
CGCTATGTTTAGAGTATTTAATCAATATCCTGGATGTAAGGTCGTTTATATAGCTCCATT
AAAAGCTCTAGTAAAAGAAAGAATAAAAGATTGGAAGATACGGTTGGAAGAAAAGATGGG
CAAGAGAGTTGTAGAGTTGACAGGTGATGTAACCCCTGACATAAGAGCAGTAAAGAGTTC
CCACGTGATAGTAACAACTCCTGAGAAATGGGACGGAATCAGTCGATCCTGGCAAACTAG
GAACTATGTTAAAGACGTAGCGCTTATAGTCATAGATGAAATACATTTACTGGGAGAGGA
CAGGGGACCGGTGTTAGAAGTAATTGTGTCCAGAACGAATTTCATACAATCTCATACGTC
TCGGAAGTTACGTATTATAGGTTTATCGACAGCTCTTGCGAATGCGAAAGATCTCGCTAA
CTGGTTGAATATAGGAGAAATGGGATTGTACAACTTTAGACCGTCAGTTAGACCTGTGCC
ATTAGAGGTCCACATATCAGTCACCCTGGACGACATTACTGTCCCCGTATGTTGACGATG
AACAAACCAACGTTCCAAGCCATTCGCACGCATTCGCCGTGTGCACCAGCATTAGTCTTC
GTATCGAGTCGACGACAAACAAGATTAACAGCACTCGATCTGATCGCGTATTTAGCAGCC
GAAGAAAATCCAAAACAATGGCTTCACATGAAAGAATCGGAAATGGAACAAGTCTTGTCA
AGCATTCGAGAGTCGAATCTCAAACTAACCCTTGCTTTCGGCATCGGCATACATCACGCC
GGTTTGCACGAAAGGGACAGAAATACTGTTGAAGAACTATTTATAAATCAAAAGATACAG
GTACTAATTTGCACTGCAACACTAGCGTGGGGTGTAAACTTCCCCGCACATTTGGTTGTG
ATCAAAGGCACGGAGTATTACGACGGTAAACAGAAGAGATACGTTGATATGCCTATTACT
GATGTGTTACAAATGATGGGAAGGGCTGGTCGACCTCAATTTGATAACGAAGGTGTGGCC
GTCGTTTTAGTTCACGATCAAAAGAAGAATTTCTATAAGAAGTTCTTATATGAACCGTTC
CCAGTCGAATCAAGTTTGTTAGAAGTTTTGGCTGATCATTTGAACGCTGAAATTGTTGCC
GGTACGGTACAAACAAAACAAGATATATTAGACTACTTAACGTGGACATATTTCTTCCGG
AGATTACTGAAGAACCCTTCTTATTATAAATTGGAGAGTTTGGAACCACAGGACGTTAAT
TATTACTTGTCGAATCTCGTTCAAACTTCGCTCGATGTTTTATCAACAGCTTATTGTGTA
GAAATAGAAGAGGATGAACGTAGAGTCCATAGTACATGGATGGGTCGCATAGCGTCCTAC
TACTATTTATCTTACAAAACGATGGCGCATTTCTCGCAAAATCTCAACGGTAATATGAAC
GTTGACGATTTGTTGAGAATTTTAGCGGATTCAGAAGAATACGCCACTTTACCCGTCAGA
CATAACGAAGATATACTTAATGGAGAGCTATCGCAACAATGTCGTTTGCCAGTCGATTCC
CTATCGCTTGATTCGTCTAACGTTAAAGCGTTTTGTTACTGCAAGCGCATATGACGCGGA
TAACACTACCTAATACAGATTACTTAACGGATACGAAATCTGTGCTGGATCAGACTATTA
GGATTTTACAGGCAATGATAGACACATCAGCAGAAAACGGATGGCTGGCCGTCTGTCTAT
CTTGTCAGATACTAATGCAATGCATCATACAAGCCCGGTGGCCTTCAGATTCGCCGCTAA
CTACACTCCCACACGTGGACTCCCAACATTTATACTTGTTCCTACAATTAGCTAGAGAAA
GTAATAGACCTTGCACAATGTTAAACGGTTTGAAAGTACATTGTATGAGAAGTTACGAAA
ATCTAGCTAAATATTTGAGGAAGGAATTTGAAGAGAATCAAATTGAACAGATACATAGGG
CTATTTGCGATTTACCGACCATAGACATCAAGCTTTACGTGCGTGGTCTATGGTTCGATG
CCGATCACGAACAGGACAAAAAGATAACGCAACCGCAGTCCAGAGATAACTGGATGCCCT
TACATGCTGATCAGGAATACACACTTCTATTAGAAATGCATCGTCGCGGCGGTAATCCGA
ACAACGTGTTGTGTCCCCGATTCCCGCGCGGCAAGAACGAAGGCTGGTTCGTAACTCTGG
GTACAGTAGATAATGGTGAACTACACGCCTTGAAGAGAGTTCCGCCGAGAGGAACTTCGC
AAATCAACTTCTACACACCATCACGATCAGGACGTATAATATACACCATATACATCATGA
GTGACAGCTATTTAGGTCTCGACCAACAATACGACTTGCAATTTGAAATACTGGATCCAT
TACCTACAGAAAATATCGAAAAAGTGTATGACACTATTGATAAAACCTTAATCGAGTGAT
TTTATAATATTTACTAAATTATTTATACTATTTAAAAAAAAAA
(6463 bp)

- SilkBase 1999-2023 -