SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26522_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_peroxisomal_acyl-coenzyme_A_oxidase_3_[Amyelois_transitella]
Ontology
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005102 F signaling receptor binding
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0005782 C peroxisomal matrix
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016402 F pristanoyl-CoA oxidase activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:5.10 TPM:4.30
ORF EntryO_TrvaMG12988_complete:A_TrvaMG_comp26522_c0_seq2
Sequence
(Nucleotide)
GAAGTTGCGCGGGGCAGCTAGTCTCTACTAAAATTAATATGTTTGCGCTACATACAATCA
AAATTTGTACAAAAAGTAACAAAAATTATAGACTAACCTCGAACAAAGTCACAATATGAA
CTAGTTAAGATCTGTAATTAATTTTCAACTATTACAAACTATTCGATTATAATTTTGATT
TAGGTATTTTGACAACTTCCTGCCACCATCTCGCTCGTTCGAAAGCACCGGGGTTGCTGA
ATAAAGTCTTTTGTAGATTTTGATAAAGGTTTCCGTCGCTCTTCCCGAGAACCGAATTGA
GCACGAAATCCGTCGGCGCTAAGGCATCCACCACCGAAACTATTTCCGGTTTCACTTCAC
TGCACAAATCCAAGATGGCGTCTCGTATCTTCCTGGCGCAACTGTCACCGTTCGCGAACC
CGCCCTCATACAATTCAACTAAATGACCATCTAAGGACCACAGGCCATATAATAAAAACA
GTTTTTTTAACACCGGCTGTAGTTTTTCATCTTTTTTGGGCAGTTCTTGCGTGAAAAACA
TTAATGATAAATATTCTGCGTAGAGTTTTGTTAACGTCTTCCATTTGTAGACTTGGCATT
TGGCTCGCGCTTCGAACTTGGTGAGTCCTTTCGCTAGTTCAGTTTCGTATTTTTCGTGAG
TTTGTTTTAGCACGTAGCATATTAGCCATTTGTATGTTGATATTAGGAACATCTCCGACT
TAACATCCCCCCCACCAAACCTCTGCTTCAATATAAGGTCGTGTTCGTTGAGGAACAGCA
CAGTCCCGAGCGGCGAGCCCACGGCGTCGGCGGAGCGCGCGGCGTGGTACTGCCGGAGCA
ACCAGTTGCCGGTCTGCTGGGAGAGCACGTTGTTGTCACCTTCGTACGTCACTGTGGGCT
CGTGGTTGCTGCGGATGTCGCCTAGGTTTGACGCCTTTAAAAACCCATGTCCACCGCAAG
CTTCCCGACACTCCTGCGCAGCCGCTAACACGCTCCACGTGAGAAGAGGTTTACTGCACG
ACACCATCGCGTGAATCTCTGACACTGCTTCGCTCAGATTATCAAGTTTGATGCCGGCGT
TAGATTTCTCTACGATATCCAAGTATATTCGCGTAAAGCTCTCTATGTAGACACGGAACA
CGACGGCGGCAGCCACGTAGCCGAATAGACGCCATTGGTGTAACTGATACTCAATGAGTG
GTATCTCTGCGTCTCGTTCGCCGAACTGTGTCCTGGTCGCGGCGTATCTCACTGCAATGG
CCACCACGCTTGATATCGAGTGACAACTCTCTTGCATTATGCCGATACGACCTGCTGATA
GATTTTCTAAAGCCGCTCCAAGTATCCTGGAGGGATCTGAGAACGAGCTCTCATAGACAC
CTTCCTCTGTGACGTCAGCAGTTCTGTTGAGGAGGTTCTCTCGCGGTATCCGATACTGAT
TGAACATTATGAAGCCATTATCAATTCCATTGACGCCGATCTTCTCTCCCATATCGGCGA
CCACGAGTCCAGGGTACGTCTCCAAAGTGGCCGGGTCCCTGATAGGAACCAGGAACGCGT
GTAGACCATGGTTGGTGCCATCAGGTGTTATCAGCTGAGCGAAGAGCAGAGTGTGGGTGC
ACGTCCTGCCTAGATTACCAACCCAGCATTTAGCCGCCTCGAAGTCAGGAGTGTTGATCA
CGAACTGTCTGTTCTTCGGGTCGTACGTTGCCGTGGTCCGCATCAGGCGAGCGTCTGAAC
CGTGGGCTATTTCTGTCAACGCGAAGCTTGCTAGGATTTCTCTATTCACGAAGACTGCTT
CATAAAACTTGTGATGTCGTTCCGTGCCTAACGAGAGTATCGCGTTTGAGAAGAGGTACA
TCCCTATCGCCATTTTGACGGAGACACTTGGGTTTAACGACTGTATCGCTTCGTTTATCG
TCATCACTGCACGCGTTCTTTTACTATATCCACCTTTCAGCGAATCTTTTGGTATGAAAT
TGTATTCGTTTATTTTGTTTAATTGTAATTGTGCTATCCTTTTCTGTTCTTCGACACTCG
GTGTCACTGATTTGTGTGCAAATAACGGGTCTCTCTCCAATGTGTGCCATATTTTGTACT
TGAGTTTTAGATCGATGTCGCCTTCCAAAGCCAGTTTTAGGCGCTTCCAGTCGAATGAAG
CCTTCTTCCTAAATGAGTCTAGGGGCCCGCTCGGGAGTTCGGGCAAAAAACTCAAATCCT
CCATACTTGATATTGAATAGAATATTAACTGAAGTTCGACACACACGGCCTACCACTGCA
CGGTTCGTGGAAGACTGATAAACGTTTAAATTGTACAGGAATTACTAACGTCTGATAACG
CGAGCGGTT
(2349 bp)

- SilkBase 1999-2023 -