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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26506_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		nuclear_hormone_receptor_FTZ-F1_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.79 TPM:1.51
ORF EntryO_TrvaMG12921_5prime_partial:A_TrvaMG_comp26506_c0_seq2
Sequence
(Nucleotide)
GATATAATACAGTCGCCTCGTCGGCTTATTCGTGTATAATGCACGAAGACGCTCCAAAAA
TGAGTATAGCGCAAAGTCTAGCCGCCTCCACGAGCCAGCCGAAGGCTGACATCGGCACAG
GAATTCCCTTGGAATTCGTTATGAGCTCTCCGGAGCCAAAATCTCTAGAAACAACCAACG
TGGAGTTGAAAATTACATACGTAGATCCTACAACAACTGGCACTGGAGGAGAACCTGGTG
CATACTTGCCGACTGCAGGAACAGTTTGTGACCAAACCGACACTAAAGATGTAATAGAAG
AACTCTGCCCCGTTTGCGGCGACAAAGTCAGCGGCTACCACTATGGATTGCTGACATGCG
AGTCCTGCAAGGGTTTCTTCAAAAGAACCGTTCAGAACAAAAAGGTTTACACATGCGTTG
CTGAAAGAGCCTGTCACATAGATAAAACCCAAAGGAAACGATGTCCTTTTTGCCGTTTCC
AGAAATGCCTCGATGTTGGCATGAAACTTGAAGCGGTGCGAGCAGACCGTATGCGCGGTG
GTCGTAATAAATTTGGCCCAATGTACAAAAGAGATCGTGCCCGAAAATTGCAAATGATGC
GGCAGCGACAGATCGCCGTTCAAACTCTGCGTGGCCCACTGGGAGATGGAGGATTAGTAC
TTGGCTTTGGTTCTCCGTACACGGCAGTGTCTGTTAAACAAGAGATACAGATTCCACAAG
TGTCATCGTTGACATCCTCTCCAGAATCTTCGCCTGGGCCAGCTCTACTGGGAGCTCAAC
CGCAGCCACCTCAGCCACCTCCACCACCTACTCACGACAAATGGGAATCCCATTCACCAC
ATTCAGCGTCACCGGATGCTTTCGCTCTAGATACACAATCAAACACTGCCGCTACACCAT
CCAGCACAGCCGAAGCAACCAGCACTGAAACTCTTCGAGTATCTCCAATGATTAGAGAAT
TCGTTCAAACTGTTGACGATCGCGAGTGGCAGAATGCACTGTTCGGACTCTTACAAAGCC
AAACTTATAATCAATGTGAGGTGGATCTCTTTGAATTAATGTGCAAAGTGCTGGATCAAA
ATTTATTCTCTCAAGTGGATTGGGCAAGAAACACAGTGTTCTTTAAATATTTAAAGGTTG
ATGACCAAATGAAACTTCTACAGGACTCATGGTCTGTAATGCTGGTTTTGGATCATTTAC
ACCAGAGAATGCACAACGGTCTACCGGATGAGACCATTCTTCACAACGGGCAGAAGTTCG
ATTTGCTCTGTCTGGGTCTGCTCGGAGTTCCATCTCTAGCTGATCACTTCAATGAACTAC
AGAATAAACTAGCAGAATTGAAGTTTGACGTTCCTGACTACATTTGCGTCAAATTCATGC
TTCTCCTCAATCCGGATGTTAGAGGTATCGTAAACGTGAAATGCGTCCGTGAAGGTTACC
AAACAGTTCAAGCGGCGCTTCTCGACTACACCCTCTCCTGCTATCCGTCGATACAGGACA
AGTTTGGAAAACTTGTGATGGTAGTCCCAGAGATACATGCATTAGCAGCCCGAGGGGAGG
AGCACCTGTACCAGCGACATTGCGCAGGCCAAGCTCCCACACAAACACTTCTCATGGAAA
TGTTGCATGCGAAACGCAAATCGTGAAAACCCAGTGAAGAATAAAGTTGTAAAACTGTGA
AGCGCCAAGCGCAGACGACACCACAACAAATAGAACATAATTAATTATTACTTATTAATT
AGTTTTAGTTATTAGCTTGGTGTGTGATTAAATTAAATAAGTTATTGTGCCGAGCGCCGG
CCGGCGTTGCCGCGCGTGCCTAGTCCCAATACAGATAAAGCAAATATTTATCTACCTAAT
ATGCAGTATACACCAATCTTGTGTTGTTTCGTTAACTTATTTAGCAGTCAATTTCTTATT
ATTTCAAAATTATAAGTGCACTCTGTAAACTACGTTCTCTGTGGCTGTTCCGGCATGATC
CGCTCCAGAGAACTACAAACATATTTTAGGAAAGCGTCTGTGATTATAAAAGAAGAAATT
CGATGAACAGTTTTAAATATTAGTGAAGATGTATAATATACGATAATTGTTAGTTTAATT
TCATTCGTGCGTACTATATTATTAATTGTACTATTTGTATAAGCACCGTAACTACCATAG
GTAATGTCGTTACCTACATAATGATATCTTACAAATTGTGTTCTAAAGCTTGCATGTACT
TGCGATGATAGTTCAATGATGTATGAATTGATGTGTGATGTAAAGTTAGCACGAGTGAAA
GGTTTCGCTTTAATAAATCGTATTAAATTACTATTATTAATACTTAGCTATAGAAAAGGT
TCATATTTTTAAAAGTTAACAAAATATATATTATACATAATATATATTTATTATAGGCGA
TTCAAAAAGTGAAAGTACGAAAAAAGAATCAAATTATAAAGTTAAAATTGTTATATATGA
AATATATGGGAGTGTTACACATATATTAAAAAATCGGCCGTACCAGTACAAATTATCCTT
GTAAATAGCATATTTAGCACATTTACAGTGATTAATTCTACTTATATACTGTAATTATGT
AAAATATTTCTCTATTTACATGCAAGAGCCTTAAAAATCATAGATTTTTAAAAATATGGG
TACTAGCGTCTACCGGCTTACGGCCGAAGGAGATGATGTATTTTTATATTAAAATATTGT
TCTTTATTAACATATATAATATGTTAA
(2727 bp)

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