SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26502_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		Carbohydrate_sulfotransferase_3_[Papilio_xuthus]
Ontology
GO:0000139 C Golgi membrane
GO:0001517 F N-acetylglucosamine 6-O-sulfotransferase activity
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005975 P carbohydrate metabolic process
GO:0006044 P N-acetylglucosamine metabolic process
GO:0006477 P protein sulfation
GO:0006790 P sulfur compound metabolic process
GO:0006954 P inflammatory response
GO:0008146 F sulfotransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0050901 P leukocyte tethering or rolling
Transcript
Level		FPKM:0.34 TPM:0.29
ORF EntryO_TrvaMG12906_5prime_partial:A_TrvaMG_comp26502_c1_seq1
Sequence
(Nucleotide)
GAAATAACGTGATGTTGCGACGAATTAATTTTTATTCAATATGTTTCGCATTTGGTCTCA
GTGTTCTTTTGATCCTTGCTGGAAGTCGATATACAGATAACACAAACTACCGTCCTATAT
CTGAGAGCCGGAGGAATATTAAGAATTTCTACAGAGTGGATGATGGAGAGGATATTGACC
TACCAGTCCCGACCAACTCTTACGATGGAACACCGAACATCGAAAAAATATTAGAGAGAA
CTCGAACAAAAATTAGATTTGAGTTGAAAAATTATAATTTTACTTATTCTGGAGTTCAAA
AGTTGGAAGACTTGACTATTGAAACTGGAGGCAATCCATTAAGAAGTATTATAATATCTA
CTTGGCGATCAGGCACTACTTTCCTCGGCGAGGTGATCAATACTACACCTGGTACTTATT
ATCATTACGAGCCTTTTCTGAAGTATGGCATTATACAAATAAGAGGGTCGCCTTTAGCTG
AACCTGCCCTGGACTTTTTGAAAAGAATGCTCAAGTGTGACTTTGATGAAATGGATGATT
ATTTAGATTATGGAAGATCGCACAATCACCAGTTCAGTCACAACACAAGACTGTGGGACC
ATTGTAAATATAAGAAGGAATTGTGTTTTGATTCTGATTTCATGTCAAAATTTTGCAAAT
TATTTCCATTTCATAGTATGAAGGTTGTTCGCCTTAGACTACGTCTTGTTCAAGAAATAT
TGGAAGATAAAGAGCTTAACTCAAAAGTGGTGTTTTTAATCCGAGATCCTCGAGGTGTGC
TACAATCAAGGCTGCACAGAGGATTCTGTCACCCTGCTCCGGATTGTTCTAAGCCTGAAC
TACTTTGTGCTGACATGATTAGTGATTATGTGGCTGCGGGACGTTTGCTCAAGCTTTATC
CGGATAAACTTACGTAAGTGATAAAAATTGTACTCATTTTCAAGTAAATTTTTTATCTAT
TTTAGGTTAAAATGGTATTAGTCTGGTTTAATAATAAA
(998 bp)

- SilkBase 1999-2023 -