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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26479_c3_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_aveugle_[Amyelois_transitella]
Ontology
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0001754 P eye photoreceptor cell differentiation
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007601 P visual perception
GO:0016020 C membrane
GO:0042675 P compound eye cone cell differentiation
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0050896 P response to stimulus
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
Transcript
Level		FPKM:3.99 TPM:3.36
ORF EntryO_TrvaMG12830_complete:A_TrvaMG_comp26479_c3_seq1
Sequence
(Nucleotide)
TACCCTCTTTCTCATTCGCTTTTGAGTAGTATAGCCGGAACTCATATTCACATAAAATTA
AACCATGGTAAGAACCGTTCACCAAAATTATGAAAGTAACAAAATACAAGACTATATGAA
ACAATTTTTTTTTTATATTTATAACCTTAAAGTTGGACTAAACGGACTACAGTCCAAACA
GCACAGCACCACGAACACCGAGTCTTACATAGATTAATTACGATAACATCAATAACATAA
ATTTTAATTTACACAATTGAATCTTAATATCAAGATATAGTTCATTTTTACAATACACGG
AGTATTTAGACTTAATTATTAAAAATTAATAAAATTTGTAACATTTACAACAACAATAAA
TACTAAATGACATTTGCATGCTAAATTTTGCACCATTCAATTTTATGCTCTATGTCTATC
ATGCAAGATACAAAATGCAACACTACTTAATAAACTCAATTGGCAAGTCACACTGTAGTA
TTAAGTTGTATTTTGAACCTTATACATTAGACTTTAAGCAAGAAATTGAATAGAACAATT
TTACATATGCAATTTAAAAATTGAGGAATGAGAAATATTAATCATGTCTATCTTTCAATC
TTTTTCAAGACACAACAAAATGATATAGTTCAACGTTAAGTTATTTAATATATTTATAGT
AAATTCTTTCAATAAGTCATTAAGTAGCACATAGCTACGTACTACCACCGTCATCTCTGT
AAAGCGTTAAATACTCTAAAAACGTCTATTAAGGCACGGTACAGACGCACAAATGCATTA
CACTTGGTGTACACGTAGTTACTGAGGCTTCTCCATAATGTAATCTGTGTCTCCAGCTCC
GGTACTTCCTCAGTTTGAGGCTGATCATGTCACAAGTCGTAGGGGAAATAGTTGAGTCTT
CGTTCCAGGTCTCGGATCTCAACGATGTCGGCTTTGAGTCTCAGTTTGAGGATTTCTCGC
CAGATTGCGTCACGGTGCTCTTTGTTGTTGATGCCCATTCGTAGTAGAGTGTTGTCATTG
ATTCGGACCAGTGCTCTGCCTGTGATGTCGTGCACGTGAAAATTCTCCCAGTATAAATGA
TAATAGTCGCTACAGTGACGTCTCAACCATTTCTGGACGTCCGCTTCAGTCCAGAGGTAA
ACAGCTTTCGGACGGGTTGTTTTTGTTTTAGGTTTATTAGAATTCAAGCTCGATTCTTCC
ACCATTTTGATGATAATTTCAAGAAAATACTAAGAATTAATATAGAAAATCCTAGAATTT
AGTTACAAA
(1269 bp)

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