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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26465_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_Bre1_isoform_X2_[Plutella_xylostella]
Ontology
GO:0000790 C chromatin
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006513 P protein monoubiquitination
GO:0006909 P phagocytosis
GO:0007219 P Notch signaling pathway
GO:0007422 P peripheral nervous system development
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016568 P chromatin organization
GO:0016570 P histone modification
GO:0016574 P histone ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:3.31 TPM:2.78
ORF EntryO_TrvaMG12768_3prime_partial:A_TrvaMG_comp26465_c0_seq1
Sequence
(Nucleotide)
CACGGTCATCCCTAAAATTTGATTATCTATGCTTGACGGGAGGAGTTGGTCGAGTGCATC
TGTATTTTAATTATTAATTTTAAATGTGAATTTCCTAAAGAATCTTGACTTTCACAGCCA
TGACAATAATAAATCTAACTTTGTTATTAAATTAATTTCAAAAAAATGTTCATTACCAAA
CGTAAAACCCATTATTAATCCGTGAAGTCAGTATTGACAAGCAGGTTAAAATGTCTAAAC
GGGGAGCCGATGAAGGCGGCAACGGCAGTAGCCAGCCACCAATCAAGAAAGTTCACTTTG
AACCTCATCTTATTGGACCAGTTTCCACTCTTGAAGAGATGGATATTAAAGTTTTACAAT
TTCAAAATAAAAAATTAGCACAGAGAATAGAACAGCGACACAGATGTGAGGCTGAGTTGA
GAGCTAGAATAGAACAACTTGAAAAACGACAAACACAGGATGATGCTGTGTTGTGTGTAG
TAAATCGTTATTGGAATCTCTTAAATGAAGACATCAGAGTCTTATTACAGCGTTTTGATG
CAGAAACAGCTGATGAATCTGAAAATAAAAACGAAAATGAGGCCACAACATCATTTCTGA
TGCAACTATCAACATGGGACAAAGAGGAATTAGATGCACAACTAGCCAACAGAGTACAAG
TTAGCAAGAGGGCTGTCGCTAAAGTATTACAAGCATTTGATCGTTTGCAGCAGAGAAATG
ATAAAATATGGCGTGCCATTAAAGGCGACTCAGAAGACGGTGGCGCAGCGCCGTCTCTGG
ACGCGACAGTGCGCGCCGCCAACGAGGAGGTGACGGCCGAGAACAGGCGGCTGCAGGGAC
TGTGCACGGCGCTCCACGAGGCGCACCACGCCATGACGCTGCGGGTCGCCGCGCTGCACG
ACTCGCTCAACAGCAGGGACACTGAGAACGCGGAGCTTAAGAACCAGATTGACGATCTGC
AGTATGAGTTGATGAAGGTCCGATCCCGAAACGACAAGCTCGAGAATCACCTAGCTGAAG
CGATAGAGAAGCTGAAGAGTTACCACCAGTCTGGCGTGAACACCGCACCGACCGCGCCCG
CGCACTCGGGCGCCGCCGCCGCCAAGCTGGAGGACATCGCGGCCGAGCTGGAGGAGCAAC
GCGAGCTCGCCAACAACAGGCTGGCGGAGCTGGACCGGCTGCACCGACAGCATCGCGACA
CGCTCAAGGAAGTCGAGAAACTTAAAATGGATATCCGCCAGCTACCTGAATCAGTTATAG
TTGAAACAACAGAATACAAATGCTTGCAGAGTCAATTTTCAGTTCTTTACAATGAGTCAA
TGCAAATGAAAACGGCCTTAGATGAAACACGACTACAGTTACAGAACGCTAAGAACTTAC
ACATGCGACAAATTGAAATGATGGAGAGTGAAGAATTATCCCGTCAAAAAGCTCTCCGTG
CAGAAATGATTCAGCTGGAGGATGTACTGGGGCAGTTACGCAAAGAATATGAGATGTTAC
GGATTGAGTTTGAACAGAACCTGGCTGCCAACGAACAAACGGGACCCATCAACAGGGAGA
TGAGACATCTCATCACGTCTCTGCAGAATCACAACCAACAGCTGAAAGGCGAGGTACATC
GTTATAAGAGAAAATACAAGGACACCAGTCAAGAATTAAATAAGGCTCGTAAAGAGGTAG
AGGAAGCAAATGCTCGTAGTGGTGAACGCGGCGATGATAAATCACTTGTTGTTAAGAAAG
AAGAACCTGATCCAGAGGGTGAAGAGGGCGGGTGTAACAGTGCGGGCGAGAGTAAGATCC
CTCTGTCGAAGGACCA
(1816 bp)

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