SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26439_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_patronin_isoform_X6_[Bombyx_mori]
Ontology
GO:0000022 P mitotic spindle elongation
GO:0005516 F calmodulin binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007049 P cell cycle
GO:0008017 F microtubule binding
GO:0030496 C midbody
GO:0030507 F spectrin binding
GO:0031175 P neuron projection development
GO:0051011 F microtubule minus-end binding
GO:0051013 P microtubule severing
Transcript
Level		FPKM:0.24 TPM:0.20
ORF EntryO_TrvaMG12686_3prime_partial:A_TrvaMG_comp26439_c0_seq2
Sequence
(Nucleotide)
GCACGCCGTGCGCCTTAACGAACACGAACATTACCGCGCGCGAGTGATGTCACCGCGACT
GCTAGTGTACATAGTGTTGTGATTGTGCGATTAATATGGTAGCGATGGTGGCGTCTGGAT
ACGGTACTCTGCGCCGTTTTCTAAGCGCCCCCGAGGGTCAGCACGGCGCTGATGAGGCTG
GCGTCGTCTCCAGCGCCTCAGTAGCCGTCTCGTCAAAGCAGCGGGCATCAATAAAATGGC
TGTTAGCGAAGGCCTTCAACAACAGGGTCCCGGAAAATTTGCAGGAGCCATTCTACAGGG
ATCACGAGGAGCAAGAACACTTAAAGCCACCGATATGCGGCGGCCTGGCCAACGCGGAGC
TGTACTGCCTAGCGCTCGCCAACATGTACTCGGACCCTAACTACCACAGTCTCAACCATT
GGAACATTCTGCAGACTCTAGTCAGGAAGGGGATTAATGTCCCCGACCCGCCCGACTGCG
CGCTCACCGAAACCGTTCTTATACAAACGAATCCTCTCAAAATGGGTGCGCACATGGTTG
TGATCGAAGCCCTGATGAAGTTGTACGCGCGCGAGGTGGTGACTGCGGACCGGGTGTGGG
CGGCGGCGCAGCGCTTCGGCGCCACGCTGCCGTCCATCAACTCAGCGTCCACGCACGAGG
CCGGCATCCTCTGCTGGGTCAACGCGGCCTGCACTGCCTTCAATAAGGCTGAGGAATCAT
CAGCCCCCGTCCCCACAGTATCAAGTCTGCAAGAGCTATGCGAGGGTACATCCCTGGCGG
CGCTCGTCTCCTTCTACTGTCCCGAGGCGCTGCCCCGCTCGGCGCTGCGCGTGGGTCGCG
TGGCCTCCATACAGGACTGTCTGCACAACCTGATGCTGGTCCACGACTTCTGCAATAACT
ACCTGCCGCATAATATATTCCATATGATGCCGGAGGACGTTACTTATATGAGAGGATCAA
TGCGACAAAATTTAGTAGCGATGTTAGCCGACTTATTCAACATGTTAGAAGTACATCCAG
TCAAATCAGTTAAACATCCAGGAAGTGTGCCCCGTTCGCCGTCCGCGTGTAGTAGCCGGC
CCAGCAACCGTCGGTCCGCCAGTTCGACTCCCGAGCGACGCAGCTGCAGTCCACAGCGGG
AACAGTTCATAGTGCATCGAGGGAAGGCCGTCACTACGCTTGCGTCGCTCGCTAGGAGGG
ACGATGATAATGGTTACGACGCCAGTCCGATGGTGCCGGCGGGCCGTCCCACACGAGGCG
AGGCACGGGACTCGTTCGCGGGACGACGGTCGCGGCGCGGCTCAGTCTCAGACGACAGTC
AGCTCACAGTCGAGAACTTCGGCGGGTCGCAGGACACGCTGCACTTCGCTGGACGGAACC
CAGAGAAGGAACTGGCGACCGTCACCAACCTTAGGAAGATATCCGCGCCCGCAGGCCCCC
TCGACAGCTACAACCCGCCGCTCCGATCATCGCGACAAGACATCCGCGGCTCGTTCCAGC
TGTTCGACGACTACAACGGCGCGCCCGACGAGCGCTTCAAGCTGGAGCGGCAACACTCGC
AGCCGCCCGTCGACCCCCCGCCCGCGCCCTCGCCCCCCGCACACCCGCTGCGCCGACAAC
GCAGCTCCGACGCCATCAACAACCACTTCACGTACAAGGGCGGCGGGGACGGGTTCTTCC
TCAACGACCGCGACGCCACCGACGGCGAGGCGCCTCTCAAGACGAGCTTCGCCGACCTGC
GACCCCGCGCTAACGGTGACCAGACAGGTATTCAGTCACAGTTCGGTCAGTGTGAACCGG
AACAGATAGACAGACGGAAAACGACGACGTTTTCAACGCCTCCGCAAAACACAACGACGT
GGCAACAACAGTTCTTACAACAAGAGAATCAGCCCAATGGCGACGAAAACTCATCAGAAG
GCGGCGGCAGCGGAGGCGCCATGGCCGCCCAGCTCAACAACATCCGCCTGAAGCTGGAGG
AGAAGCGGCGCCGCATCGAGCTCGACAAGCGCCGCGCCGAGCACGCCCTCTCGCGGCAAC
GGCAGCAGCTCGGGCACCAGGCCTTCCTGCAGGCCGTCACCAGGGAAATGGTTGTTGAAC
CGCCGAGTCAATCTGTCGATAACGTGGTCTTAGAGCAATACCAGCAGTCGATAGCCAAAA
TGAACTCGAGCCTGCAAGATATACAAAGCGACATAGCGCGGCTCGCGAACCAACAGAACC
AGTTGCAACAACAGCAACATCAACAACAACAACATCAACAGGCGAAGCAGTTGTTCCAGC
AACAACCGCAACCGCTTGTGCAGCCGCAGCCGCCGCCGTCCCCCTACCAACAACACTATC
AACCAAACATTCCACAACTGCACAACCAGTTCAGCTCACAGCACAACGTGGCGAGATCGC
CGCTCGCCCCCTTCGGCTCCACGCCGCACCTGCCGCAGGATCTGCGGGATATGCGGGACT
TGCGGGACATGCGGGATCAGCGGGACGTGCGGGATCAGTACTACCAGCCGCAGTACCGCG
AGATGGACGAGTACAGTCGGCAACAGTTCTACTTGCACGACAGCCCGCCGCCGCCTCAGC
GCCGCACGTGGGCGCAGCACGCGCACGAACACGAACAACGCGGCTGGCAGCTCCACCAGC
AACAACAGAACCAGGTGCAGTACCAGCGCGAGCCGGAGCCGAGGACGTGGCGCTCCCCCT
CCCCCGCCGCCTCGCCCCCGCACCCCGCGCACCCTCCACACCCGCCGCACACCCCCGCCG
ACCGCAACTCCTGGGCGCCGCAGGGCTTCCACGTGCACTACTCGCACCAGAACGGCAACG
ATCAGAACCACCTCAGCTACGTCGTTAACGAACAGCAACACAAGCAGCAGATACGGCAGC
CGTCCCCCTCCCCCGCGCCCGCGCCCGCCCCGCCG
(2915 bp)

- SilkBase 1999-2023 -