SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26436_c0_seq5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_znrf1_isoform_X1_[Papilio_polytes]
Ontology
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0008270 F zinc ion binding
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030054 C cell junction
GO:0042734 C presynaptic membrane
GO:0045202 C synapse
GO:0046872 F metal ion binding
Transcript
Level		FPKM:4.36 TPM:3.67
ORF EntryO_TrvaMG12679_complete:A_TrvaMG_comp26436_c0_seq5
Sequence
(Nucleotide)
CGCATGCAGAGCCTGTTTACAATTTTGCGACGTTTTTTGTTTGTATCCTCAAAGTGCTAA
TTTAATTAATCGCGTAGTTGTTTCCGTGTTTCATACGATGCGTTCGGCCGGAGCGTCGGC
CGAATCGCGCAAGTGCTCGTGATTTTCGGCTACAGTGCATGACAGGTTCGAGTTTTGCGT
AACGGAGTCGTTATGGGCGCAAAGGCGAGTACTGCGAACGGGGGGCAGAGTCCTCGGACG
AGGACGTTCTCGACGAGCTCCGGGTCGGACGTGGTGTCGGGCACGACGGGGTTCAGCCTG
CTGCGAGCCATCCCGGGGATCCAGGTCTCGAACGACCGGCAGCGCGCCCGCTCTCTGTCC
TCGGTGCCCGACCTGCACGCCTCGCATGAGGCCATCGCGATCCCTCCCAACTCGCAGAGC
TACGAGGCGTCAGGGGCCGCGAGCCCCGACACGGACTCCAGCTCGAACGAGGAGGCGGGC
GGCGCTCCGGCGGCTTCGGTCGCGCTCGGCCGGGTGTACGCGGCTCACTCCCTGCCTTCG
CACATCTGGTCTATAAACGGTATAAAATGTCCGGTTTGCAGCAAGTTTGTGCTCCCGGAC
GATATCGAGTGCCATCTCGTGATGTGTCTCACGAGGCCGCGTCTGTCATACAATGAGGAC
GTCCTGAGCGATGCAAAGGGCGAGTGTGTGATTTGTCTCGAGGAGCTGTCCGCGGGCGAC
ACCATCGCTCGCCTACCCTGCCTCTGCATCTACCATAAAGGATGCATAGATCAATGGTTC
GAGGTGAACAGATCGTGTCCCGAGCACCCCGGCGACTAGTGCGTGCGTGTGTGTGTGTAT
GTGTGACTCGCGACTGAATATATATCGCATAGACTGTGACGCCCGCCGGGCATTGTAAAT
ACAAAAACTTATGCTAGTGAGATCTTTACCATATAATGAATTTAATTAACAAAAAAAAAA
TAACAAAGACAATTATAGAAAAACGAAAATTTAATGATAATTTGGGAATATTTCGGTGTT
TTATTTATAATTTAGTAATATTTTAGTTGTTAACGCGTATAGTTTATTTTAAAGATAGTT
GTTATAGTGTTG
(1092 bp)

- SilkBase 1999-2023 -