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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26428_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_smad_nuclear-interacting_protein_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0031047 P gene silencing by RNA
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0044822 F RNA binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
Transcript
Level		FPKM:5.87 TPM:4.94
ORF EntryO_TrvaMG12642_complete:A_TrvaMG_comp26428_c0_seq2
Sequence
(Nucleotide)
GTGATTTTTGTTTGTTTGCATTCGTAACTATATAATTCGGATTGTATTAATTTAATCAGC
GGAGAAGCATTTTGATTGCACTTGAAGAATCCTTAAAATATTATACGTGATTTTACTTTA
CGTATGAAACTCGTAAAGTTTCGCCTGTCACATTGAAGTACTGAACCAAATAAAATAGAA
ACACGAGCGCCAGTGCACATGATATTTGTTCAAAACTGAATCAAAATGAAATCGAAAAAG
AAACATCTTAGTTCTTCTGAAGAATCTGATGATTCTAATGATAGTGCTAGAAGCAGTTCA
TCGGAGAGTGAAAGCGAAGAATCTTCAGCATCAGAACACCGTCATAAGAAGAAAAAAAAG
CACGATTCATCTAACTCGGAGTCAGAATCTGACGATCAAAAGAGGTCCAAAAAACGTAAA
CATAAAAAGAAGAAAAAGAAGCACGGTAAAAAGAAACGACGATCAGATTCTGTAGCAAAA
CCAAGCAACGACGAGTTCATATTGAGTGGTAGCGAGGAAAATTCTAAAAAGAAGCGAAAA
CACAAACACAAGCATGCGAAACGCGCCCGAAGTTCTTCAGCTAGTGAATCAGAAGAGGAG
AAGACAACTCAACGTCGTTTACACAGTGTGGTTAAAGAACGTCGACATTCTGTAGAAGAA
GTTCATCCAACTCATACTTATTACCAGAGGGAATTCAGACGTTCCCCATCAGCAGATGAT
GCCAGAGAAAGGGAAGTACAGAGATTCTACAGAGGTTCTAGTAAGGAACGAAGGCAATAT
CAAGATCATTATGATCGACCACCAGAAAGGAATCAAAGATATGAAGAGTTTCGTCGCCCT
GAAGAAGGCTATCAAGTCAAACCCAGAGAGGAAATGTATCATTCCAAACCAGACCCTAGG
GGTTATGGCAATAACCGTTTTGGACAATATGACCAGAGAAATAAAAGAAGGGATTATGAA
GAAGCTGGTGATTACAAGGATCGTCGTGGGCAAATCGAGAACGATCGGTTCTACCCCCCA
CCGCTGCTACCACCGCGCGACTTTCCGGACAAACGACAATATCAAGAGAAGAGGGACTAC
CCGAACAAACGCGACTTTCAAGACAGACGTGATTACTCCGACAAGCGTGAGAAATACCGC
GATGAACCATATCCTATGGACAGGGGTCGCGAGCCGCGCAGAGATAAGCCACCTCCGAGA
TCTGAGAGACCTCCCATGCCGCAACAGAGGGAACGGTCGCGGTCCCGCAGCTACGAAGAC
CGTCCCCGGGAGCGCGGGCGTCGCGCCGACCACTCGCGTGCCGACCACTCCCGCGACGAC
GACTCCCGCCACGACGACTCCCGCCGGCCGCACGACGCCAGGAACGACGAACACAAACCC
AAGCCCAGGGAGAGGAAATCTAGATTTGCTGATGCAGAAGACAACAAAGAGTACAATTGG
GGTAAGACGGAAGTCAAGAAAGAAGGCGGAAAGAATCCAAACGAAAAGGACAAACCAAAC
TTTGGTCTGTCGGGTAAACTGACGGCCGACGCTAACACAGTCAACGGTGTTGTTATAAAG
TATACGGAGCCAGATGATGCCAAGCAACCTAAACGGAGATGGAGGTTCTACCCGTTCAAA
GGCGACAAAGCCCTGCCGATACTGTACATTCACCGTCAGTCCGCGTTCCTGATCGGTCGC
GACAAGAAGGTGGTGGACATCTCCCTCGAGCACCCCTCCATCAGCAAGCAGCACGCCGCG
CTGCAGTACCGCGCCACGCCCTTCACGCGCGCAGACGGCTCGCAGGGACGCAGGGTCAGA
CCCTACGTCATCGATCTAGAATCCGCGAACGGCACATTCGTGAACAACAAGAAGATAGAG
CCGCGTCGTTACGTGGAACTGTTGGAGCGTGACGTAGTGAAGTTTGGTTTCTCTCAGCGC
GAGTACGTGCTGCTTCACGAGAACAGTAAGGACGACGCACTGGACGATGACCAGCAGGAC
CCCTCGCTTGTCACCACGGATCATATTAAACACGAGAAGCGACTCAAACAAGAGGTCGTA
GAGGATGGCGAATGAATATTGATTTATGTCGTAAGGTACGCTAAAGTAGCGCGCACATAC
GAACGGGGCAGTACATACATTCAGGTCATGATTTATCCAAAATGTATCATAACATTTTAG
GCGAATAACACTTTGAGGCCAGTCTCATCGTGTTGTCTTATGTGCGCGCTCTTTAAGTAC
AGATACTGTATCGTTTTGGTAGTTTAGTAGTAGATGTAGTCTATAATATTATTGTTTATA
GAGAGATTACAAAAATGATTACTTGTTGAATATTCATGATCCATTCTCTTGATGTAAATG
TCGTGAAGGATAAGTTTTTTAGAAATAAAAAAAAAATAGGTGGTACTCTTGTTTACGTGC
TTCCCTAATAAATCGTGAAATTTAGAGAGGATTCAAAATTGTTGTTACTTCACTATTTGT
GGCTACTAAATGGAATGATGACGTCAGAATTCAGTAGTTAGGTGGTTCTTTATGTTTTAA
AGTTAGTATAGGTTAGTTTAATAAAATAACTTTGTTGGTGACGACACGACGCCGTTTCTT
TTTATGTAATTATGGATTTATGCATAGAACAATTTCGGTGCAACCTTTTTTTTTAATTTT
TACGTTGAACTTTTTAACAGCACAAAACCATGTGGTTGTTTGTTTTCTAGAAGTGATTTT
TTTCTATGCAAAATCAGATTCAGATCTTTGAGATTTAATCAAGGTTTTATGTTAGAGAAA
ATCATATGTCTGCTTGACATTAAGTAAAGGTAGAATTTTAAATAAAATAATTATTATAGA
TAAA
(2824 bp)

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