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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26428_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_smad_nuclear-interacting_protein_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0031047 P gene silencing by RNA
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0044822 F RNA binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
Transcript
Level		FPKM:3.03 TPM:2.55
ORF EntryO_TrvaMG12640_complete:A_TrvaMG_comp26428_c0_seq1
Sequence
(Nucleotide)
TGTTCCTGGTGACCAGCACTATTTCTTTCATACTAAGCTCGATTTTATAAAAAATCGGGA
ATTTCAATTACAAAACATTCGAGCGCGATAAAAGAATATAAATAAAAAAAAATGTTGTGT
TCTTTTTCCCGAAATTGGTCTGCTTAGTCATTTTGTTGAAAGAATGTTCATTAATATGAA
TGTAATTTTGGTATCCGCAGGGGTCGCGAGCCGCGCAGAGATAAGCCACCTCCGAGATCT
GAGAGACCTCCCATGCCGCAACAGAGGGAACGGTCGCGGTCCCGCAGCTACGAAGACCGT
CCCCGGGAGCGCGGGCGTCGCGCCGACCACTCGCGTGCCGACCACTCCCGCGACGACGAC
TCCCGCCACGACGACTCCCGCCGGCCGCACGACGCCAGGAACGACGAACACAAACCCAAG
CCCAGGGAGAGGAAATCTAGATTTGCTGATGCAGAAGACAACAAAGAGTACAATTGGGGT
AAGACGGAAGTCAAGAAAGAAGGCGGAAAGAATCCAAACGAAAAGGACAAACCAAACTTT
GGTCTGTCGGGTAAACTGACGGCCGACGCTAACACAGTCAACGGTGTTGTTATAAAGTAT
ACGGAGCCAGATGATGCCAAGCAACCTAAACGGAGATGGAGGTTCTACCCGTTCAAAGGC
GACAAAGCCCTGCCGATACTGTACATTCACCGTCAGTCCGCGTTCCTGATCGGTCGCGAC
AAGAAGGTGGTGGACATCTCCCTCGAGCACCCCTCCATCAGCAAGCAGCACGCCGCGCTG
CAGTACCGCGCCACGCCCTTCACGCGCGCAGACGGCTCGCAGGGACGCAGGGTCAGACCC
TACGTCATCGATCTAGAATCCGCGAACGGCACATTCGTGAACAACAAGAAGATAGAGCCG
CGTCGTTACGTGGAACTGTTGGAGCGTGACGTAGTGAAGTTTGGTTTCTCTCAGCGCGAG
TACGTGCTGCTTCACGAGAACAGTAAGGACGACGCACTGGACGATGACCAGCAGGACCCC
TCGCTTGTCACCACGGATCATATTAAACACGAGAAGCGACTCAAACAAGAGGTCGTAGAG
GATGGCGAATGAATATTGATTTATGTCGTAAGGTACGCTAAAGTAGCGCGCACATACGAA
CGGGGCAGTACATACATTCAGGTCATGATTTATCCAAAATGTATCATAACATTTTAGGCG
AATAACACTTTGAGGCCAGTCTCATCGTGTTGTCTTATGTGCGCGCTCTTTAAGTACAGA
TACTGTATCGTTTTGGTAGTTTAGTAGTAGATGTAGTCTATAATATTATTGTTTATAGAG
AGATTACAAAAATGATTACTTGTTGAATATTCATGATCCATTCTCTTGATGTAAATGTCG
TGAAGGATAAGTTTTTTAGAAATAAAAAAAAAATAGGTGGTACTCTTGTTTACGTGCTTC
CCTAATAAATCGTGAAATTTAGAGAGGATTCAAAATTGTTGTTACTTCACTATTTGTGGC
TACTAAATGGAATGATGACGTCAGAATTCAGTAGTTAGGTGGTTCTTTATGTTTTAAAGT
TAGTATAGGTTAGTTTAATAAAATAACTTTGTTGGTGACGACACGACGCCGTTTCTTTTT
ATGTAATTATGGATTTATGCATAGAACAATTTCGGTGCAACCTTTTTTTTTAATTTTTAC
GTTGAACTTTTTAACAGCACAAAACCATGTGGTTGTTTGTTTTCTAGAAGTGATTTTTTT
CTATGCAAAATCAGATTCAGATCTTTGAGATTTAATCAAGGTTTTATGTTAGAGAAAATC
ATATGTCTGCTTGACATTAAGTAAAGGTAGAATTTTAAATAAAATAATTATTATAGATAA
A
(1861 bp)

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