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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26427_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101737053_[Bombyx_mori]
Ontology
GO:0002446 P neutrophil mediated immunity
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006306 P DNA methylation
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016607 C nuclear speck
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0019899 F enzyme binding
GO:0030218 P erythrocyte differentiation
GO:0030854 P positive regulation of granulocyte differentiation
GO:0032259 P methylation
GO:0042119 P neutrophil activation
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0043231 C intracellular membrane-bounded organelle
GO:0045171 C intercellular bridge
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048384 P retinoic acid receptor signaling pathway
GO:0051568 P histone H3-K4 methylation
GO:0070688 C obsolete MLL5-L complex
GO:0071300 P cellular response to retinoic acid
Transcript
Level		FPKM:0.98 TPM:0.82
ORF EntryO_TrvaMG12628_5prime_partial:A_TrvaMG_comp26427_c0_seq2
Sequence
(Nucleotide)
TTTTATTTTTTTTTTTTTTTTTCAAAATTTTTTTTTGAAGCACTCATAATAACATTGCTA
GTTGCCTACCGCAAGAAAATTAATCTTTCTCTTTTCTAAACAATAAAATTGATTCAAACC
AGTTGTATATTGTCAATCATGTTTTTATAAATGCATGTATCCGTCGTCATGTGTATTATT
GTGTATGTGTATGTATCGTCATGTAACGACGTCGCGCTCAGCTGCCTGTCATGTTTTAGT
TTCTTGTGATTCAAATATTTTACCTAACTTTTTGCACACGTTCCTCTTAACTTATAACAC
AGTTTTAACCTCTATTAACGGCTAACGATCTATCAATATGTTACGTGTGAAAAATCTAAT
TATAAACGGAGATTATGACTCAAAACGAGCCGTCTCCGTTGTTATTCCTAAAAAAAAACG
TAAAACAATAAAACAACTATAATTTACTTAAACATTATGCGTACAAAAATCTTAGCATCA
TTCCCTAAACGAGCGATCGATAAATCGATAATAAATAAATATATTAATAAGATACATAAA
CGTTGTACATACATATATAAAAAATCTCTTTCTTTTCACCATTATACATAAGTACCGACG
TGGCATCCTTAATTAATCTCCTATATACAATATGTACAGAGAGAAATAAAATAAAAACAA
TTTGTACTTGCAGAGAAATCGTGAAAATCATTAAAGAATTTATAATGAAAATATACACAA
CAAGCGCACTGGCGCCACTTAATACTAATTTTTCGAAAATTTATTTATAATTAGTATAAT
ACAAGAGCGAGCTGTCCACGAACGCCTGAGATTTATAAAAATATGTCTTATAGAGTATCC
TCGGTCCTACCTCTCACAACGCTTCGCGGACACCGCTACATCTCGAATGACATGTTATTT
ACGCGCATGCTCCGCCCAAATGTGATAAGGTAGCAAACGGAAAGCGTTCGAATCAGGCAT
GCTCAAGTATCCCATGCTATGGCGGCTATGGGCCAAGTGACTGTCTCCGGTATTGTGTTG
AGTATCCCTATCAGAGTGCCCTAGAGAGTGCCCCCATATAGTCGTACCGTCATTGGAGGC
GGGGTCTTCGTCTTCGGCCAGCGTGAGACCGAATTCCCGTCGAAGCCTCGAGCTCAGCTT
TTCCCGTTGCCTTTCCGAGGCGGTCGGCTGGGCGTCGAATACACCTTTAGGCGGTTGTTC
GAGGAGATCCTTCTGTAATCGTTGCTCGATGTCGTCGATCGTCCTCGGGGAGAGATCTCC
CGTGGATGAGGAAGAGCTAGCTCCCCCCTCGCTTCGCACCACCTCTTCGCCCCCCGCCCC
CGCTAGACGCTTGCGGTACTCGCTTATAGAGAGCTTCCTTCTAACAGGTTTGGGTTTCTC
CACCGGCGGCGGGTTGAGCCGGGGGTCGTTGCTCCCGGGGCAGTACGGCTTGGCGTCCGT
TTTGACCGGCGAAGGCGCGATCAGCCCGGTCTTATTAGAACTCTTCAACACTCCCGACAA
TATAACACTATTATTAGAATCCATATTGTTCACTCTGGTCAGTATTTCCTGGACACTTTT
CAGTTCGTCTGCAGGCGTAATACTTTCCTTGTCAAATAAACCACTGTCTAAACTTGTAGT
CCTATCTATTGCACTCTTTATTATCGACATGTTGGGAACGTTTTCGGTGACTTGATTGTC
TACGTTGAACGATTGCGACATATTACTGAAAATACCGGAGAAAAGTCCCGTCGAACTAAA
CCGAGACGTGAAAGGTAACGTCGTGTTCTCTAAAACGGAGGGCCTCTGGATGGGACTGCT
TTTTTCTTCTTTCTCCACAGCAGGAACCATTTGTAAAATCGTTTTTACTGGCTCTGTGGG
CTCTTCTTCTGGTAGAGGAATAGTTTCTAAAGACGGCATGATTAGTTCTGGACTGGGATC
TTTCGGTAAAGGTATGTTTTCCGGAGAGAGTATTGTGACAGATTCGGTAGGTGGCAGAGG
GATATTCTCCGGTGAGATGCTATATTTGACATCGTCATTCACCGGATTGCTATCATCTTG
CATGTCTCCGTTGATCTCCCCGTTCTCTGCGTCTGTGCGTAGTTGAATACTGATCTGGTC
GTCCACCATATTCAAGTCAAAATTCAAATTGACTTTCTTTCGTTTCTCTTTTGGCTTCTT
ATTCCTACTTTTTAGTATCAAAATGTTTTCCGTGTGAAATGAGTGTATTTTTTTCTGGAT
GTCGTCCATCTCGTCTCGTTGTGGAGATGAGTTCCCGCTCGTATCAGCGGACTGACAACT
ATTCAGTTTCTCACTGGGGCTTCCTATTGATTTCGTGTCCAAATTGTCTAAAGACTCTTG
TATTTTGGGTTGAGGCATCGTGTTATCAATTTCCATCGGCACAACCTTGTTGTAATTACT
CTCTTCTAAATCAACATTATTATTATTAGATTTGACATCTTCGGGTTTCGTGATGTCGGG
CGGGTCTTCATCTGGCACTCCTATTATCCTCCTAATGTTTGCACTGTCGTGGGGTCCTTT
TAAATTAACATTAAGCACATCATGTTCCATATTGCACTGATCGTCTGAACCTTGACCACT
GTCGGATCGCGTCCGGTCCCTACCATAAATACTATCCATTATATTACGCACTTTATACTG
CCGCGATAAAGCGGAATCGTCTTTAACGGGCGAGTCTTCTGACGTTAAAACTGGCGAAGT
TTCTTCATTACAAGGCACAATGGTGTTTTGTTCACATGACAACGATTCCCTGGCGAGACG
ACGTTTCTTCAGCGGAGTCACCATTTCATTGGGAGGAGACTCTGCACAAGGGAAGTCACT
TTCTTCACTGATGGCTTGTCGCAGCCATCTTTTCTTGGCGCTGTGCTGAGGTAAGATAGG
AGCGGGCACCTCAGGCACTTCAGGAGGAGTACTTCTAGTAATCCTCTTAGATTTCTTCGG
GGGGCGGTTTCTCTCTCTCGCCGGGGTACGAGGCGGAGACGACCTCGCGTTCTCCTCATT
ATCAAGATCCTGACCGCCACTCAGATCCCCGATCATGGTACTGGCAACCCTAACTAAGCT
CTCTAGGGATGGGGCGTTCACTAAAGCAGGTCTGTAAGGCGATCTGTATGGAGAAGGAGT
GCGTTCGGGAGAACGTCCTAACCATTCCGTGGCGATCGTTTTCTTTGTTTTCGGCAATTT
GAAGGCGGATTCGACGGATCCTACTGCAGCTTCGACCAATAAACACGCCGAACTCAGTCC
CAAATCATCTGACACCCTGTCGCTGGGCTTGTCGTCATTGTTCCCGGGTAATGTAGTGGC
TTCATCGGCGGAGGTCGCGAGGTCGCTGTCGGCTGAGTTGAGGCGGCGACGTGCCGACTG
AGACGTGGTGCGAGCTCTGCCTTTACGTCTCTTCCGTTTCTTTGTAGAAACATGTATTTC
ATCATCATCATCTTTATCATAAGCATTCGGATGCGGATCTGATTCTCTACGTTTTTGGCG
TTCCTTTACTTCCTGTTTCCTTTGTTGGGCTTTCTCCATTCTCTCAAACGCTTTCATTAT
GGCTTCCATTTTACGTTCTTCACGAGTCATTTTCTTTTTATCCTTATCTTTAGTGCGGGT
TTGTATTTTATCTTGAGAGTCATCTGTTTTGTCATCAAGGGAGTCGTGATTAGAGCAGGC
AGTTTTGCTTGATCGCGAGGATCTGTCGTGACACGCAGATTTCGCTGTCACTTCTTTACA
TGGTTTTTCATCTTCCGTTTCTTCTTTAGCTGTTTTTTCTTCCAAAGTGTCCAATTTCTC
GTCATCTGAAGACATAGGCTCTGGTTCTGGTGGAGGTGTTGGAGGTTTCTCAATTTTTTC
TTCTGGAATCTTCTCCTCTTCGATTTCTTTAACCGTTTCTGGAATCTCTTCTGGCTCGTT
TTTGATTTCTTCCTCAATTTTTTCTTCAACTTTAGTTTCGGTTTTAACAAAATCTGGTTC
ATCAAAGTCTTCCATCTTCATTTCTTCTTTGGCTGTTAAATCTATTTCTGGTTTTTCTTC
CATCATTGGATCCATTTTGACCGGTTCATCAAAGTTAAGAGCTATGGGAGTAGTTTTGAC
TGGTGATAGAGGATATTCTTGTTTGAATGGTGATAGTTTCTCTTGTTTGAATGGTGATAA
TTTCTCTTGTTTGAATGGAGACAGTTTTTCTTGTTTAAAAGGAGTAAATTTCTCTTCTTT
TATAGGCGGAGGAAGGACTTCTTTGACAGGCGTGAGCACCGGAGGGAGAGGCGGAGACAC
TGGCGATGATGAACTGAAACATCTATTCCTACTTCTTTTCTCTCTTGACGAATATTCCAT
GCTTTTCCGACTCGCCAATGTGTTCAGACCATTCATTTTACAATGCTTTGGATTCCCGCA
AGCGCAGGGCTGTTTGGTTCCATCTGCGTCATGACCAACGGTAATTTCAGTGTTTGACTG
AATTACTGTTATCGTAACCAAATAGACGTGCAAAGTTCCTTTGACGATACAATGTTGCAA
CTCGGCATTAGGTTTACAAGATCTTCTGACAAATCTTGCTTCATTTCCATACGTTCTTGT
ATCAATGCATATTTGTATATTGTCCTTTGGTAATCTGTAAAAGAATACAAATGGACCCGG
TTTCTGACTCCCAGCCCTGGCGGAGTTCTGCAGTTGAGGTCGATGCTGATTGGATAACAT
GTATTTGCCTCGGAGTTCAATAACAGGCGAATTTTCTTTCAAATCTTTTGTGGCAATTAA
GATTTTACCACCTGCGTGGGGTACAGTCGTGCACAAATGTGCGTTTAATGAATAACCCAT
GTTAGGTGTGTTCCCGAGTTTGCTGCTATATTTCATTATTTTAGCTCTCAGCTCTGGACT
GTAATGGTTCGTGACGGCTAACTCATAAGAATCTTGCCAGTGCGATTGATTCGATAAACT
CGAGCTGTACTTACTGCGATGTAGCAACATTTCCTTCTTACGCTTGACTCTTTTCTCTGA
AAGTTTTCGTTTAGCAACTTTTCTCAATACATCGGGTTTCTTCGGTTTCTTAGGACCACG
TTTGGGAAGAGGTTGAGGAAGAGTGGGCTGCGGTAAAGGAGGTAGGACCGGCGGGGCAGC
GTTGTATGTGGTTACACTGGAACCACTTGTGTTCGTATATGTTGTTACAGTGAGGAGCCG
TTTTCTTCTTTGTCCTGATTGTCGCAGGCACTCTGAAGAGTCGGAGTCTGAAGCTCCCAA
TGCATTGAGTTCCTCTCTCTTTCTCATCTGTATGGCTCGAGCGTGGCGGCGGTCAATAGC
TCGCGGCAGACACAGTTCGCACATGTACGCATCCGGTATGTTCTGTCGGTCGATGCCCAT
ACAGTCGACATGCTGCCACTCTCCGCATCGGTCGCAGCAGATCATGTAGCCGTCGTCGTG
CGTGAAGTCGCAGATACATCGCGTCTTGCCTTCCTCTTCTCCTTCGGGCGCGGTCTCGGT
ATCACTTCCACCTGCCTCGGGGCGCGGTCGGTCCCCGTCGAGAGACGATATAACGGAGGC
GGCATCGTCATCAGGAGGCGGGACGGGGAGCACGTGTGTATTGTCTTCAGGCATAGGGGG
AGGTATAGGCGGAGTGGGATCGGGTGCTATGACAGGTTCGTAGGAAGCAGTAGAAACTAT
GACAGGCGAGGTGCGCTTCACAGGGCTCGCA
(5671 bp)

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