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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26427_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101737053_[Bombyx_mori]
Ontology
GO:0002446 P neutrophil mediated immunity
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006306 P DNA methylation
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016607 C nuclear speck
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0019899 F enzyme binding
GO:0030218 P erythrocyte differentiation
GO:0030854 P positive regulation of granulocyte differentiation
GO:0032259 P methylation
GO:0042119 P neutrophil activation
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0043231 C intracellular membrane-bounded organelle
GO:0045171 C intercellular bridge
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048384 P retinoic acid receptor signaling pathway
GO:0051568 P histone H3-K4 methylation
GO:0070688 C obsolete MLL5-L complex
GO:0071300 P cellular response to retinoic acid
Transcript
Level		FPKM:1.28 TPM:1.08
ORF EntryO_TrvaMG12624_5prime_partial:A_TrvaMG_comp26427_c0_seq1
Sequence
(Nucleotide)
TTTTATTTTTTTTTTTTTTTTTCAAAATTTTTTTTTGAAGCACTCATAATAACATTGCTA
GTTGCCTACCGCAAGAAAATTAATCTTTCTCTTTTCTAAACAATAAAATTGATTCAAACC
AGTTGTATATTGTCAATCATGTTTTTATAAATGCATGTATCCGTCGTCATGTGTATTATT
GTGTATGTGTATGTATCGTCATGTAACGACGTCGCGCTCAGCTGCCTGTCATGTTTTAGT
TTCTTGTGATTCAAATATTTTACCTAACTTTTTGCACACGTTCCTCTTAACTTATAACAC
AGTTTTAACCTCTATTAACGGCTAACGATCTATCAATATGTTACGTGTGAAAAATCTAAT
TATAAACGGAGATTATGACTCAAAACGAGCCGTCTCCGTTGTTATTCCTAAAAAAAAACG
TAAAACAATAAAACAACTATAATTTACTTAAACATTATGCGTACAAAAATCTTAGCATCA
TTCCCTAAACGAGCGATCGATAAATCGATAATAAATAAATATATTAATAAGATACATAAA
CGTTGTACATACATATATAAAAAATCTCTTTCTTTTCACCATTATACATAAGTACCGACG
TGGCATCCTTAATTAATCTCCTATATACAATATGTACAGAGAGAAATAAAATAAAAACAA
TTTGTACTTGCAGAGAAATCGTGAAAATCATTAAAGAATTTATAATGAAAATATACACAA
CAAGCGCACTGGCGCCACTTAATACTAATTTTTCGAAAATTTATTTATAATTAGTATAAT
ACAAGAGCGAGCTGTCCACGAACGCCTGAGATTTATAAAAATATGTCTTATAGAGTATCC
TCGGTCCTACCTCTCACAACGCTTCGCGGACACCGCTACATCGTCATTGGAGGCGGGGTC
TTCGTCTTCGGCCAGCGTGAGACCGAATTCCCGTCGAAGCCTCGAGCTCAGCTTTTCCCG
TTGCCTTTCCGAGGCGGTCGGCTGGGCGTCGAATACACCTTTAGGCGGTTGTTCGAGGAG
ATCCTTCTGTAATCGTTGCTCGATGTCGTCGATCGTCCTCGGGGAGAGATCTCCCGTGGA
TGAGGAAGAGCTAGCTCCCCCCTCGCTTCGCACCACCTCTTCGCCCCCCGCCCCCGCTAG
ACGCTTGCGGTACTCGCTTATAGAGAGCTTCCTTCTAACAGGTTTGGGTTTCTCCACCGG
CGGCGGGTTGAGCCGGGGGTCGTTGCTCCCGGGGCAGTACGGCTTGGCGTCCGTTTTGAC
CGGCGAAGGCGCGATCAGCCCGGTCTTATTAGAACTCTTCAACACTCCCGACAATATAAC
ACTATTATTAGAATCCATATTGTTCACTCTGGTCAGTATTTCCTGGACACTTTTCAGTTC
GTCTGCAGGCGTAATACTTTCCTTGTCAAATAAACCACTGTCTAAACTTGTAGTCCTATC
TATTGCACTCTTTATTATCGACATGTTGGGAACGTTTTCGGTGACTTGATTGTCTACGTT
GAACGATTGCGACATATTACTGAAAATACCGGAGAAAAGTCCCGTCGAACTAAACCGAGA
CGTGAAAGGTAACGTCGTGTTCTCTAAAACGGAGGGCCTCTGGATGGGACTGCTTTTTTC
TTCTTTCTCCACAGCAGGAACCATTTGTAAAATCGTTTTTACTGGCTCTGTGGGCTCTTC
TTCTGGTAGAGGAATAGTTTCTAAAGACGGCATGATTAGTTCTGGACTGGGATCTTTCGG
TAAAGGTATGTTTTCCGGAGAGAGTATTGTGACAGATTCGGTAGGTGGCAGAGGGATATT
CTCCGGTGAGATGCTATATTTGACATCGTCATTCACCGGATTGCTATCATCTTGCATGTC
TCCGTTGATCTCCCCGTTCTCTGCGTCTGTGCGTAGTTGAATACTGATCTGGTCGTCCAC
CATATTCAAGTCAAAATTCAAATTGACTTTCTTTCGTTTCTCTTTTGGCTTCTTATTCCT
ACTTTTTAGTATCAAAATGTTTTCCGTGTGAAATGAGTGTATTTTTTTCTGGATGTCGTC
CATCTCGTCTCGTTGTGGAGATGAGTTCCCGCTCGTATCAGCGGACTGACAACTATTCAG
TTTCTCACTGGGGCTTCCTATTGATTTCGTGTCCAAATTGTCTAAAGACTCTTGTATTTT
GGGTTGAGGCATCGTGTTATCAATTTCCATCGGCACAACCTTGTTGTAATTACTCTCTTC
TAAATCAACATTATTATTATTAGATTTGACATCTTCGGGTTTCGTGATGTCGGGCGGGTC
TTCATCTGGCACTCCTATTATCCTCCTAATGTTTGCACTGTCGTGGGGTCCTTTTAAATT
AACATTAAGCACATCATGTTCCATATTGCACTGATCGTCTGAACCTTGACCACTGTCGGA
TCGCGTCCGGTCCCTACCATAAATACTATCCATTATATTACGCACTTTATACTGCCGCGA
TAAAGCGGAATCGTCTTTAACGGGCGAGTCTTCTGACGTTAAAACTGGCGAAGTTTCTTC
ATTACAAGGCACAATGGTGTTTTGTTCACATGACAACGATTCCCTGGCGAGACGACGTTT
CTTCAGCGGAGTCACCATTTCATTGGGAGGAGACTCTGGAACAAAAACATCTGCACAAGG
GAAGTCACTTTCTTCACTGATGGCTTGTCGCAGCCATCTTTTCTTGGCGCTGTGCTGAGG
TAAGATAGGAGCGGGCACCTCAGGCACTTCAGGAGGAGTACTTCTAGTAATCCTCTTAGA
TTTCTTCGGGGGGCGGTTTCTCTCTCTCGCCGGGGTACGAGGCGGAGACGACCTCGCGTT
CTCCTCATTATCAAGATCCTGACCGCCACTCAGATCCCCGATCATGGTACTGGCAACCCT
AACTAAGCTCTCTAGGGATGGGGCGTTCACTAAAGCAGGTCTGTAAGGCGATCTGTATGG
AGAAGGAGTGCGTTCGGGAGAACGTCCTAACCATTCCGTGGCGATCGTTTTCTTTGTTTT
CGGCAATTTGAAGGCGGATTCGACGGATCCTACTGCAGCTTCGACCAATAAACACGCCGA
ACTCAGTCCCAAATCATCTGACACCCTGTCGCTGGGCTTGTCGTCATTGTTCCCGGGTAA
TGTAGTGGCTTCATCGGCGGAGGTCGCGAGGTCGCTGTCGGCTGAGTTGAGGCGGCGACG
TGCCGACTGAGACGTGGTGCGAGCTCTGCCTTTACGTCTCTTCCGTTTCTTTGTAGAAAC
ATGTATTTCATCATCATCATCTTTATCATAAGCATTCGGATGCGGATCTGATTCTCTACG
TTTTTGGCGTTCCTTTACTTCCTGTTTCCTTTGTTGGGCTTTCTCCATTCTCTCAAACGC
TTTCATTATGGCTTCCATTTTACGTTCTTCACGAGTCATTTTCTTTTTATCCTTATCTTT
AGTGCGGGTTTGTATTTTATCTTGAGAGTCATCTGTTTTGTCATCAAGGGAGTCGTGATT
AGAGCAGGCAGTTTTGCTTGATCGCGAGGATCTGTCGTGACACGCAGATTTCGCTGTCAC
TTCTTTACATGGTTTTTCATCTTCCGTTTCTTCTTTAGCTGTTTTTTCTTCCAAAGTGTC
CAATTTCTCGTCATCTGAAGACATAGGCTCTGGTTCTGGTGGAGGTGTTGGAGGTTTCTC
AATTTTTTCTTCTGGAATCTTCTCCTCTTCGATTTCTTTAACCGTTTCTGGAATCTCTTC
TGGCTCGTTTTTGATTTCTTCCTCAATTTTTTCTTCAACTTTAGTTTCGGTTTTAACAAA
ATCTGGTTCATCAAAGTCTTCCATCTTCATTTCTTCTTTGGCTGTTAAATCTATTTCTGG
TTTTTCTTCCATCATTGGATCCATTTTGACCGGTTCATCAAAGTTAAGAGCTATGGGAGT
AGTTTTGACTGGTGATAGAGGATATTCTTGTTTGAATGGTGATAGTTTCTCTTGTTTGAA
TGGTGATAATTTCTCTTGTTTGAATGGAGACAGTTTTTCTTGTTTAAAAGGAGTAAATTT
CTCTTCTTTTATAGGCGGAGGAAGGACTTCTTTGACAGGCGTGAGCACCGGAGGGAGAGG
CGGAGACACTGGCGATGATGAACTGAAACATCTATTCCTACTTCTTTTCTCTCTTGACGA
ATATTCCATGCTTTTCCGACTCGCCAATGTGTTCAGACCATTCATTTTACAATGCTTTGG
ATTCCCGCAAGCGCAGGGCTGTTTGGTTCCATCTGCGTCATGACCAACGGTAATTTCAGT
GTTTGACTGAATTACTGTTATCGTAACCAAATAGACGTGCAAAGTTCCTTTGACGATACA
ATGTTGCAACTCGGCATTAGGTTTACAAGATCTTCTGACAAATCTTGCTTCATTTCCATA
CGTTCTTGTATCAATGCATATTTGTATATTGTCCTTTGGTAATCTGTAAAAGAATACAAA
TGGACCCGGTTTCTGACTCCCAGCCCTGGCGGAGTTCTGCAGTTGAGGTCGATGCTGATT
GGATAACATGTATTTGCCTCGGAGTTCAATAACAGGCGAATTTTCTTTCAAATCTTTTGT
GGCAATTAAGATTTTACCACCTGCGTGGGGTACAGTCGTGCACAAATGTGCGTTTAATGA
ATAACCCATGTTAGGTGTGTTCCCGAGTTTGCTGCTATATTTCATTATTTTAGCTCTCAG
CTCTGGACTGTAATGGTTCGTGACGGCTAACTCATAAGAATCTTGCCAGTGCGATTGATT
CGATAAACTCGAGCTGTACTTACTGCGATGTAGCAACATTTCCTTCTTACGCTTGACTCT
TTTCTCTGAAAGTTTTCGTTTAGCAACTTTTCTCAATACATCGGGTTTCTTCGGTTTCTT
AGGACCACGTTTGGGAAGAGGTTGAGGAAGAGTGGGCTGCGGTAAAGGAGGTAGGACCGG
CGGGGCAGCGTTGTATGTGGTTACACTGGAACCACTTGTGTTCGTATATGTTGTTACAGT
GAGGAGCCGTTTTCTTCTTTGTCCTGATTGTCGCAGGCACTCTGAAGAGTCGGAGTCTGA
AGCTCCCAATGCATTGAGTTCCTCTCTCTTTCTCATCTGTATGGCTCGAGCGTGGCGGCG
GTCAATAGCTCGCGGCAGACACAGTTCGCACATGTACGCATCCGGTATGTTCTGTCGGTC
GATGCCCATACAGTCGACATGCTGCCACTCTCCGCATCGGTCGCAGCAGATCATGTAGCC
GTCGTCGTGCGTGAAGTCGCAGATACATCGCGTCTTGCCTTCCTCTTCTCCTTCGGGCGC
GGTCTCGGTATCACTTCCACCTGCCTCGGGGCGCGGTCGGTCCCCGTCGAGAGACGATAT
AACGGAGGCGGCATCGTCATCAGGAGGCGGGACGGGGAGCACGTGTGTATTGTCTTCAGG
CATAGGGGGAGGTATAGGCGGAGTGGGATCGGGTGCTATGACAGGTTCGTAGGAAGCAGT
AGAAACTATGACAGGCGAGGTGCGCTTCACAGGGCTCGCA
(5500 bp)

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