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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26415_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_protein_polybromo-1_[Bombyx_mori]
Ontology
GO:0000228 C nuclear chromosome
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007067 P mitotic cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0016568 P chromatin organization
GO:0090544 C SWI/SNF superfamily-type complex
Transcript
Level		FPKM:0.20 TPM:0.17
ORF EntryO_TrvaMG12588_3prime_partial:A_TrvaMG_comp26415_c0_seq2
Sequence
(Nucleotide)
GGGACATGCCCGATAGAGATGCTCCTGGGGACATCACTCCGCTGCGTACTACCGGCTTCG
GCTTCTTCGATGACATGAAGTTTCTGGATCGTTCGTGCACGGCCATGAGTCGTCCGTTGC
CCTTGTTGACGTGCAGATCTCTCACGTGTCTCAGCAAACGCGGCAGGTTGGGGAAGGGCG
CCTGTCCCTTGCGCACGCGCGCACAGTTCCGCCACAGACACGGGTACTCGCTGAACGAGC
CCCGGTAGTGTTGCTGTATGTGTCCCGCTGCGCTCGCGCTGTTTCCACCGTCCCCGATGC
AGTGTTCCATGCAATCCGTCAGATCTTCAAACTGATAGTCGCAGGTATCCCAGGCGCATT
CGTATGTCATTTCCATGGTTGTGTGCGCGGCCAGCTCCCTCATCTCCTCGGCGAGGCGCG
CGGAGGTCTCCTCGTTGCAGCGCGTGGCTCGCTCCTCCCAGACCTGCTTGGTGGCGGCGG
GCAGGGAGCGCCACTCGTTGCCGACGATGCGCGATATGTCGCCGAACGTAGCCTCAGGGT
TGTTAGCTATGACAGCTTTCCTGACTTCGCTCGAGTACAGAATGTAGCCCGTTACAATCT
TCTGTTTCTGTTCTTTCTTCTTCTTGCCGGTGGCGGGGGTGGCTGCCTGGCTGGTGTTGC
GGTCTTGACTTGGAGTCGCACTTAGTGACGGATTGTAGGGGTTACTGTTGCCTCCTGTAG
AGAGCGGTGTAGCAGGTGAAGCTAATGAAGAGTCGTCCAACGAATTTTCTAGAATCATCT
CGACGTCCTGACTACCGATCGTCGTGTTTATGAGATTCGTGAACTGGGGCTTGCAGTCCG
CAGTATCGAGATTGAGCGTCTGCTGTTGCGGTTTGTGCGCGAAGGCCGTGGTGGCTGTGA
GTACGTCGTGGTTGGACGCGAGCGCGGGCGGACCGAGGCGTTTCGGGAAGTAATATATCT
CATCAACAGTAACGTCCTTAGTGTGCTCGAACTTGCGCAGTCCAGACTTCAGTTTCCTGG
CGACTCGATTAGACTCGTCGTAGATGCTCTCGCAAACGTACACGTCGCCTTCCGATATTT
CTGTTGGACGACATTTAAGATAATCTTCGTAGTCAAGCACAGAACACTTCCCAACGATAC
CAACGAGAGGGCTTGTGTCGTGAATCGTAGTCAACAATACCTCTTGTTTGTAAAATGGCT
TATTGATGATATTGTTCACTTCTGATGGGAAGATCAAAAACGGTCCGCGGAAATAACATT
TGTTGTCTCCAGTCTCCCATATAGTATCGACTTGAGCGATCATCTGTTTCCCGCCTTCAG
TGACGACGTACACATAGTCACCGGTTTTGATGACTCCCGAACACACAGTGTTGTACTGTT
CATAGTACGTGTTCTCATCGTCTGTTCCTAATGGATTGTACATTACTACGTCTGGTCTTT
CTTTCTCCTGTACATTCTCAAGTATCTCCAATTCTGCGAGTTCATCCTTGTGTTTTTCAA
CTCGTTCACGGAACACGGACACTGTGCGTTGTGGTTCTAGAGGCACCTCTCTAGGTACAA
TAGAGACTTCTTTCTCGGGTCCCTCCCACGCTCTGATCTTCTTAAACCAACGATGTTTAG
AGCTGTATCGACTCTCGCACACGTAAACATCTTTGTCAGCGAAACCTTCAGGTCTAAACT
TGAAGTATTCTTTAACGTTCATGACGTAACACGGTCCTACGACGCGATCCAACGAGACTG
GTCTGAATACTTCCGTTTTAAATACTTCTTGTTGCAGGAATTTACGCGTTCTAATGTGGA
ACGTTTCTTGAGGTCTAAAGTAAACATTACAATACAACATAGGTACCCCATCGCTGTTAG
TCCACAGTCTTTCAACCTGCACTATATTAGGATCGAGGTTGCCCTTCTCCGGTTGTACGT
ATAAGAAGTCTCCTTTACTGTACTGGGATTGTAAGTTGGCATCGTTTGATGGCATGGAAT
CGTCGTTGCTTGACCTAGTTTCATCTTCATCATCATTTTCCTGCAACAATTTACATTGTT
TTATGAGTTCAACGCTAGTGGACATCGTGTCTCGTGTGAAGGATAGTGCTGGAGACTGCA
ATGTACCGCGACAGAGCAGGTCTCGTTGATCGATGTAGTAGCACTGTAGTTCTACGGAGT
CTTCGAATATTTGACTGTCTGTGCGGGATAGGCGACGGGCTCTTTCGAAAACAGCAAACA
TGTCTTGTTGGAAATGATCAAGTCGTTTGTAAAGTCCTTTGTCAAGTCTCCTCTTGACCA
AATCTAAGGATATAGCTCGTATCTTCTCGCCGTTATTCGATTCATCATGTTCTGGCAATT
CAGCCATACTGTCTGAATAACATCTCCCTTCTTCGTCCTGATGATTGTACACAGTAGTGA
ACAAGTTGAGTAGTAGTTCTTGCACGGCCGCCGGTACATCGGGCACCGAGTCGTCATCAT
GACTTAACATCTGTTTAGTTTGTAAACAAACTCTATGCAATATCAGGGCGTCCTTGTAAA
TCTGAGAATCCGGTTCGTTATATTTGCAAGCATTGTCGAACATCAAAATGAAGTCCGAAG
CTAACTCGTTGACCGAATGGTAGGTGTTATTCTTCAGTTTGTGAGCAATCTTTTCCATGT
CTATGGGATTTTTGATGAGCTCATAGTAATCTGGGTATTCTGTTTTGCTCGGTAGCTTCA
TGAAGATTAAAGCTAGCTGGCGATTGGCTTTAGGATCTCTATAATCACGTATAGCATCAT
ACAAAGTCCTCAGTTTCTGTTCAAAAGGCGACAACTGCCTAGACTTGGGCTGTGGTTTGT
TCATATGCTTAACAGGCGTTTTCCTCTCATAATTTCCGTTCAATTCTTTAATTTTCTCAT
TTAATACGCGTTCCAGTAGATTCGCATCTTCGTAAACCATAGATCCTTCTTCATTGAAGT
GACGACAGTTAGAAAACATCAAACGGAAGTCTGTTATCATTTCTTCTAGAGAGTTGTAGC
GGTCATTCTTGATATTAGCTTCAATAGTCAACATATCGATGGGGCTATCAATAACATTAT
AGTACTCCGGATACAATTTCTTGCTCGGTTTCTCCATGAAGAGCAGCATTGGTTGCCTTC
CATCGGAACATGTGAATTCGACCAGTTGTCTTGACACGTAATGTAGTTTCTTCTTGAGCG
GCATATTTGGTTTCGGCACTATAGCTGTTGGTATCGGAGATTGTGCGGACGGTGGCAAAG
GATTTATGCGTGGACGACCTCTAGGTCGCGGAGTTTGTACTTGCGTTTGATTCTTGACAG
ATGAAAGACTTTCATCGTCACTTGAAGATGACTGAACAATATCTAGAAGTTCTTGAACGC
GCTGTTGCATTAATCTTTGCAATTTAACAGCATCCTTATAAAGTCTAGAAGTCGGTACAT
TGTATACTTTAGCATTTTCAAACATAACATTCATATCGCCAGCCACTTCAGATAATGTTC
CGTAGTTACCGCGACGAATTTTATTTTTTATTTGATTCAACGACATGGGGTTCTTGATCT
CCTTGTAATAGTTAGGGTATTCACGCCGGGATGGTAGCTTCCAAAATGATTCGGACATTG
GGACGCCACTAGGTCCAAGATGATTCTTGATAGTCTCAAACAACTTCCATTGTGGTGAAT
CTTCATTCTCTACTTTGTCTTCGTCACTATCGGCACTATCTTCTGAATGCTTAACAAAAG
CTTCAGTGTCAGTTTCAGGCGGTTCCATGATAGCTAGAGCCCTGCTTGTCGGCACAGGGC
CAACTCTGGATGTGCGTTTGCTGCGAATACGCTCCGATGTCTTGGCAGGTCCGCTACGAC
CGTGCTGATCTATCTCTTGTCTGCGTACTGTGATTATCTTCTTCAAAGTTTTCGCATCTT
TATAAATTTGACTGCCCGGTTCATTGAATTGACACGCATTCCTGACCATGAGCATCAAAT
CTTTTTCCAATTCTCCGATACTTGTGTACTCTCCACCTTGAATTTTCTGAGCGATTGTTT
TCAAGTCGATTGGGGAGTCTATAATACTGAAGTACTCTGGATAACGTCGTTTCGATGGTA
TGAATTGAAATGCTGGGTAAAGAGGTCGACCGTCGATGTTGGCTGTCATAACTGCACTAA
ATAGTTCTTCATAGACATTATCGTCTTCATTGTTAGTTGATGTCTCAGACAAGTCCTCTG
CCACATCAGATCTTCTGCTTGACGAACCATTGCGGGAGTACTTTGGTGTTTTCATCTCTT
CATCATGTTCTAAAGTTTGTTTAGTATGTAAGAACAACTTCCAAAGTTCTACAGCATCTT
TGTACTCAACAGTATCGGGCTTGTAGAATGCTTTTGCATTGTTGACAAGCAGTTCAATGT
CTGCCGTCAACTCTTCGATGTCCTCGTAGTTGTCTGTTTTAAGTTTCTGTTGCACTCTAA
GCAGATCAATAGGTTGTGAGACAACTTCGTAATACTGTGGTTCTTGACGTCTCTTGGGAG
CTCGTATAAATGAATCACACAAGAGAGTCCCGTCATCTTTCTTATGCGATCTTATTGTGT
CATAAAGTTGCTGGCATATCTCACTAGGATCTAACTTCTTCCTCCTCCTGCTGGACGGCG
GAGGTCCAGGGTTACTTAGTTCATCACTATCGTCTCCATCAGCGCCTCGGCTGGCGCCAG
AGGACGCTCGGCGTCGCTTGCTCATTACAACAAAATGCGGCTTTACGGGTCACGAAGAAC
TTAAGACATTACGCGCCACAGAATAGTTTTGTTAATTGTAGCTGATGAAAAACTTAGTCA
ATATGCAAATAAAATGAATTAAAGTAACACTTAAAAAATTTTAACCATAATTTTCATGTT
TATGCTTTGTTTTTTTTTAGTTTTC
(4885 bp)

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