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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26405_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_mRNA-decapping_enzyme_1B_[Amyelois_transitella]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000932 C P-body
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0008047 F enzyme activator activity
GO:0008134 F transcription factor binding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030234 F enzyme regulator activity
GO:0031087 P deadenylation-independent decapping of nuclear-transcribed mRNA
GO:0042802 F identical protein binding
GO:0043085 P positive regulation of catalytic activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045893 P positive regulation of transcription, DNA-templated
GO:1903608 P protein localization to cytoplasmic stress granule
Transcript
Level		FPKM:6.71 TPM:5.65
ORF EntryO_TrvaMG12528_5prime_partial:A_TrvaMG_comp26405_c0_seq1
Sequence
(Nucleotide)
GTTCTTGTCATTTTCCTGCTGTGATGCTTGTTCGTTGAACAAAACTTTTATTTTATTAGT
ATTAAAAATGGCTGACACCGGGTTACGTAGTATGAATTTCGCTGCATTAAAGCGGGCAGA
TCCATATGCACGTGAAATTATTGATAGTGCTACCCACGTTGCTCTTTACACATTTGAAGA
GAACGAATGGGAGAAAACCAATATTGAGGGTGCTTTGTTTGTGTACAGTAGAAATGGTGA
ACCTTACCACAGTTTAGTGATTATGAACAGGCTCAATACAAACAATCTAATAGAACCAGT
GTCAAAAGGAATCGAATTACAGCTTAAGGAGCCGTTTTTACTATATCGCAACGCCAAGTG
CCGCATTTACGGCATATGGTTTTATGATAAGGACGAGTGCGTGCGAGTGGCCACGAAGCT
TAATACGTTAGTAAAAGAGTCAATTAAACAGTCACAAGGTGAAGTCATGCCTCAGAACTC
TGTTTACAATTCGTCTGCAAACCCGGCTCAGTCTATTGATATCTTCAGTATGCTGAGCAA
AGCGCAAGACGATTACAATTCCAACAAAGGCGGTAGTGGAAACAAACCAGATCTAACGCC
GGCTAAAGCACCCGATATGACGTCGCAGAGTGTAATGGATTTCTTTGCGAAAGCTGGAAG
TGGCGCTTCGGCCCAGATGCCCGCGGTGTCTTCGCTACCCTCGCCCGGCATATTCGGGCC
GCGGCCCACGGACGCCAGGGAGGTACCGCAACTCCTGCAGAGGCTCATGAGCAACCCCGC
ACATTCAGTAGAACACATTGAAAAGCAACAACGTTCTGTGACACCACAGGAAGGACAAAG
TTCAAATGGAAATACTGCAGTAGACTCTGGTATCAAACCAAATTGTATGTTTTCATTAAA
ATCAACACCTTTGGAGAAACAAAACCAGAGGATACCAGGCATGACAAAAGTTCTGGACAG
TAATGATTCTAATGGAATGGTTGCGATGGAGAACGAATTGAATTTGATGCACTTATCATC
TCCCAAGACAACCTCCCCGTTAGCCGCGTATCTGAACCAGTCACAGGACATGGGACACAC
GGTAAGCTCTTATAATGGTTGCAAAATGGAAGATGTGGGTCGTTCTTACCATTTGATTGA
CTCTGTAACTACTCAGCAGAAACCAGCGTTGATGCCCCCCACAATGTTTACTGCTAGTTC
AGGCAGCGATGTGCAGCCGTCACCGCAGCCCCTCACTAGGAATCAGCTCCTCCAGGCCTT
TAATTACTTACTCAAACATGATGCAGACTTTGTGAATAAACTGCACGAGGCTTACGTCAA
ATCATTTTCAGAAAAGTCCTATTCTGTGTCATAAGTTAATCTACTGCGACTGTGGCTGAT
TTTGCCAGCCATTATTGTAATGTACAGTTGTAATTTGAAGCAAAAATCTCTATTAAAATA
TGTTGTGTAGACCCAGTTGATTGTAGTGACTTAACATTTGGACAGAGTATTTGAAATAAG
TTTAAAAACAAAATGTTTTCATTCGGTTTTGTATAGTGAATGAATTTTAGTGACCAGATG
AGTGATATTATGTCAGTCCTTAATTAAATAGGTTTTTTTGTGATATTTATAATTAGCCTC
AGATTGGTGTCTTGTAAAATCAATTCATATGTTACTGATTTGTTCATCACATGTCCTGCA
TAGTTTTATATTCTTCATATCGAAAACAAGGACAATACATAACTTTAATAAAATATTTAC
AGTTTTCTCATAGAGATGACTTGTTTGTGGCAATAATAAAAGTATGAAAAAAGTACTATT
TTCAAGTTGCGACTTTACTTGATAAGTTTTATGGACTGTAAAAATAACTTTTCTATTCAT
TTATATAATATGCCTTATGTTACGTATAGGAATCAGTTTACTATTTTTCTGTCTAAGTAA
TATTTTTG
(1928 bp)

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