SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26392_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_phosphatidylcholine:ceramide_cholinephosphotransferase_2-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0000138 C Golgi trans cisterna
GO:0000139 C Golgi membrane
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0006686 P sphingomyelin biosynthetic process
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016049 P cell growth
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030148 P sphingolipid biosynthetic process
GO:0030173 C integral component of Golgi membrane
GO:0033188 F sphingomyelin synthase activity
GO:0047493 F ceramide cholinephosphotransferase activity
Transcript
Level		FPKM:15.98 TPM:13.46
ORF EntryO_TrvaMG12480_complete:A_TrvaMG_comp26392_c0_seq1
Sequence
(Nucleotide)
TTTCTAGTACGCGGTCGTCGCGCTCATCACGCTTCTAATATAGAAACATAACGAACGATC
AACAATTATATGTAATAAAATAATAATATCCGGCGTCAGCCAGTTCATGATTTAAATAGT
AAAGCACGTTCGCCGCGAGTGTCGAAGCATTTCATCGCTAGTGTTGGTGCCGTTACCGAT
ATGCAGTGAAGTGTGTGCATAAAATAGTTTTCTATTTCGACCTCGTTTATGTGAGCCTAT
GAATTTTGGTGGAGGTGAGGCCGAAGCTCCGGGTTCATCACGGGCGCTCGGGAGACTGAG
ACGCCTAATCGATGTGGCCCCGCGTTCGCCCCGAATGACAGTTCGCACATTGATCCGGTT
CCATTCAACCAAATGGTGATTGGATGACGATCTCAGCACGCTCCCCAGAAAAGGAGCCGT
CGCCACCGAAGCAGATCAACTTTGCTGAGCCGTTAGTGGAGTCAGTACGTGTCTACCTCG
CCAATGAGGTTCCCTCCAAGCAGCTAGCCCTCGTGCCCTGCACGCCCACGTGCCGAGCGT
CGCCTCCGACCCTGCCCGTCTGTGATGTCGATATAGCCACGCAAACCGCTCGCGAGGACA
TCAAGGGCATCAACTTCGAGGCCAGACTCAAACGGAATGACTTAAACAACAATCCACCGG
GACAACAAAACGAACAACCTCAGAACGGCACTATGCCCAGCCAGGCAGAACTAATGCAGA
GGCAACCGCTATTAGCTCGCACCACCAAGGCAGACGCGCCGCAACCTGCCACCGACGAGT
CCGACCCCGACCAGGACCACTCGCCGCAGAGGAACCACACCGGGGACTTCATCATCGAAC
TACCGCCGGGTACTGTCAGGGAAGAAAGGTATCCTAAAGAAATATGGAAAACGATACTAT
CATTCATCTTCCTGTTCATGTGCGTCTGCGTCAACATGATATCGCTGTCGTTGGTGCACG
AGCGACTGCCGGACAGGAACACGACCAAGCCGCTCAACGACATCGTGCTGGACAACGTGC
CCGCACACGACTGGGGCTTGGCGGTCTCTGAATACTTAATCATGATATCGACGACGGTGG
CCATGCTGGTGGTCGTGTTCCACAAGCACCGGTTCATCGTTGCACGTCGCTTGTTCTTCA
TCATCGGGTTGCTGTACCTGTACCGGTCGATCACCATGTTCGTGACCGTTCTGCCAGTCT
CCAGCACCACCTACACCTGCAGCCCGAAGAGCAACAGCACGGCGCCGCTGCTCATCATCA
AGAGAATGTTCTACTTGATATCCGGCTTCGGGTTGTCTATAAACGGGAAGCACACGTACT
GCGGAGACTACATATACTCGGGGCACACGATGGTGCTCGTACTGAGTTACCTGGTGGTGG
CGGAGTACTCGCCCAAGAAGCTGTGGCCGATGCACTGGGCGATGGCGGGCTCGGCCGTGC
TGGGCGTCTCGTTCGTGCTGCTGGCGCACGGGCACTACACCGTGGACGTGGTGATAGCAT
ACTACATCACGACGCGCCTGTTCTGGACGTTCCACTCGCTGCTCGTGACGCCGCACAGGG
CGGGCAACGGGTACAACCAGTACATGATACAGCGCGAGTGGTGGTACTGGGTGTTCACGT
ACCTGGAGCGCAACGTGCGGGGCCCGGTGCCGCGCCGCTACGACTGGCCGCTGCCCTGGC
CGCGCACCAAGCTCTTCAACCGCCTGAGCTAGTGACGCGCGCGCGCGACCCCGCCGCCGC
CGGAGCGAGTGTGACGCTCACCTTCTGCGAGTGCCGCTTCAACACCTGCAGCTCCTTGGG
ACTGGTGCGCGTGCAGATGGCCAGCGTGAGCGTGTAGTCGAACTGGTGCACGATCAGGTT
GAGGTAGACCGTTTCCTCCCAGTCGATCTCCGGGTCGCCGATCGGCAGTTTCTTGGAATC
CTTGCGGAAGACCTCGACGTCCGTCTGCGAACAGTCGTGGCCGGGCGGGCCGGTCGGTGA
ACAGTGAATCTCTACGAAGGTCCAAGTCGGGGCGCGATCATTCATGTGTGAGACTATGTG
ACAGTGCGTGTTACCTCTGTCGCGAACTATACTGACACTTTTACTACTTCGTTTACTTTC
GTTGTTCTATGTATATCGTATTGTAAGTTATCTCTTATTGGACAAAGAACAATAATCAAA
TGAATGTATCGGAAGCTATTAATAGACTCTTTGTTTTTGTAAATTAAATATTTTATAAGT
GGTTATATAAATCTCGAGTCTATGTAAGAGCATAGTATTTATTGTAGTGCGGTTGAGAGG
CCGCGCCTGCATATTGTAAGCTACTAGCTTATAATAAGAAAACCTATTTTTATATTGTTT
CAAATAAAGTACATACTTGAATGTTGTTATTAATAATAGTTTTTGTATCTAGTTCCAAGT
GTTTCGGCGACTGTTAGTTTTCACGGTGGAATGGTGCTAAATTATAATTGAATCCTTAAC
ACTAATTGTCCATCTAATTTGTTTGGTAGTTAGAGTATCTATACTAATTGAGAAAGCTTC
ATTCCACATTCTATTCATTCTACTCTTACAGCACAGTCTTTGTACTTAATGCGATCGTTA
TCATATTCAAAGTATAACCAATTTTTATTTTTTAAATATATAGGTACAGTATTATTTATA
ATCCACAACCACTGGCCATTAGTACTTGATAGAAATATATTAATGCGATAAATTCTAAAG
AGGGGGATATGTCTTATTAAATAAGTGTTACAGGTCGCGTTATATTCAGAACAAACAGCA
ATAAATCATGATACAGATTCGATAATATCGTATCTCGATCGAGTCAAACGATAGATAACA
CAGTATCGAGGACACCGATATTATCCGTACTAGTCCCTAAGCATGAATCATAACTCATTT
TAATTAGTTTCACATTACATTTATCACTTACTTTAAAGATACAATGTATGTTCGTATTGT
AAAAACAAAGTAAAGGGAAAATTTTATATCCGTTTATCATCAGTACGAAACAAGTGAAAT
TATAATTTCATTACAAATCTGTTGATAAGCGTGTCGTAGTTGCTCGAACATACTCGAGAC
TCATAAATACCTTTCAATCAATTTATGTAATATGATAACGATACACGCGTACAGTAAGAC
GCATTTTACACATTGAACAAATTTACACGAGATCCTTTTGAAGTGGAGACCCACAATATT
GTTTAAGAATTAAGTAAATAAGATGAACTGTTCTAGTTTCTCTTTATGCCAAATAACACT
GAAGTCTTCTGTGGTCACACTTACCTCATATTTAGGTAGATAGCGCGATGATCCTTTCAC
GTGACGCTTTCTGACGAAAAACAGCAGGTCGTCGCAGTCGATGGCCTGCTCCTCTTGGAA
GAGGAAGTGCCTCACGAACAGATCTGTCCAGTACGTCGTTCCTTGTAACACTACGAAGCC
AGACTCTGGAAACATAACTGCTATGGAAACATTCATAGTGGACAGACATTTCGTAAACTT
TAAGTACTCTAATCATGAACTTTGTAAAACTTATTTGTAAATATTATCTCATGTCAACGA
TGTAGTTGTGTTAAATCAAATACCGAATGTGTTGTATGTACTGAAGTGCCTTTGTACAAA
ACAGGGGAGTTTTATCATTGATCTTAATGGATTAGTGATGAAATCCTAACGAGTGTGTAA
CATAATAATATGTTGATGAAGTACATTATAATGTTGCTTGTATTGTTATATTGTATTTAT
TTTGCCATTATTGTTGTTGTTGATGTGATTGCAAACGTCCACATTTAGGCTTACTTTACT
GGGAAGTAGTTGTCTTGCCCCGAGCTATGACCTTCATTTACTTGTAATTAATTTTTCTTC
TAATGACACAGTCGCACATTACGATAGACTTATTATGAAAACGAGCAACCTTGTACCTGT
CTGACTGAATGCTATGAACAAGTATGACAGTCACGTGGCTTGCTCGGCCGTCTTCAGACC
TCGATCATAGGAGGCAGAGCCGTTTTCTAAACTTTTTTGTATGAATTTACACTGATTTGT
TTTGTTCTTGTATGTCATTGTGATGTGATCTTAGTTTACGTACGAGATGTAAAAAAAAAT
ATTTTTACTAATTCTTGTAGTATTATGTATGCGTCCATAAAATGAACTGTTTGATGATAA
ACCTATTAATATGACGATCGCGTACTGACGTCATCATTTATGGCACTTCGCCAAAATTAA
ATTGGACAAAAATATCGGCAACTGTTGTTACCTGCTCTTGTATTTTTGTTGATAAAATGA
AATACTAGTATTATACTATATTATTATGTGGTGTAGGTATATGGTAAACATGTGACTATT
ACTTAGGACTACTTAATCAATGTTTTTTCGGACGCTGAAGCACCTTCTATAACGTATTTG
TTAAGACCTTTTAAGCACCTGCGAGTTTTTTTTTAATTTCATGAACAGATATACATTTAT
AGTAATTTATACAAATACTTAAAACGAATGATGCGCACAAGGAAATAAGGATGAAGTAGA
AACGAATGCTATTGTGATAATATTATGTACTATTGTTATTAAAATACTATTACACTTTCT
TAACACGTGTCTTTTATATTTATAGTCTTATTTTAACTTCCATTCATTTTATCAATGAAA
TGCTATGTTTATACTTCAAAATTATTATGTAAATATCAGCAGTAGTTTTGAATATATGAT
TTCTTAA
(4687 bp)

- SilkBase 1999-2023 -