SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26383_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_anoctamin-9-like_isoform_X3_[Papilio_polytes]
Ontology
GO:0005227 F calcium activated cation channel activity
GO:0005229 F intracellular calcium activated chloride channel activity
GO:0005247 F voltage-gated chloride channel activity
GO:0005254 F chloride channel activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006821 P chloride transport
GO:0007200 P phospholipase C-activating G protein-coupled receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0009897 C external side of plasma membrane
GO:0015111 F iodide transmembrane transporter activity
GO:0015705 P iodide transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0034605 P cellular response to heat
GO:0034707 C chloride channel complex
GO:0035774 P positive regulation of insulin secretion involved in cellular response to glucose stimulus
GO:0042391 P regulation of membrane potential
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0050965 P detection of temperature stimulus involved in sensory perception of pain
GO:0050966 P detection of mechanical stimulus involved in sensory perception of pain
GO:0060438 P trachea development
GO:0070062 C extracellular exosome
GO:0098655 P cation transmembrane transport
GO:1902476 P chloride transmembrane transport
GO:1903959 P regulation of anion transmembrane transport
Transcript
Level		FPKM:0.48 TPM:0.40
ORF EntryO_TrvaMG12450_complete:A_TrvaMG_comp26383_c0_seq4
Sequence
(Nucleotide)
ATCGAATTACACAAGAATCGAATATTTATAGACCAAATTCCATCGATCATAAAATAATCG
ATTTACCCAATATCGATTATACATTGGCCGGCGGTGGTTGCCCGGTCTCCGCGTCCACGT
GTTGTCTGATCTCATCCAGGATCTGATGGTCACCGTGAGCAGCTAGATCGAAGTCGGACC
CTGATAATGATGCAATGTGATTCCAATTCGGCTCCGTTGTGTCACCGTAACCGAGTTAGT
CTAGACGGGCGTGGCTAGGCCACGAGGTCCACCTTGCGAGTCGCGGGTCACTTGCGACCT
CGTACGGGTCTCCTCCAGGATGTACGAGTTGATGACGTACGCCTCGCGCCGGATCCGGTC
CCGGAGCTCGCCGGACATGTCCGGGATCGCCCATTTCACTATTATCGTGCCTAGGGCTAC
CACGTTCTCGAAAACAACAACAAATGCGAGTCTAGCTCCTATAATGTGCCAGTACCAGCT
GCTGTGCGCATAGTTCTTGCCGTCCTTATAGTCCCAGTAGCCGGGGAAACTGCACGTGTT
TCCTGTATAACTAGTATTCAAGGGCGGATGTTCGAGCACGGTGATGTTGAAGTCTGCGAG
CGTGTTGTTGACGTACTGGTCGAGCGAGCCGTACGTGAACTGGTACACGAGGCGCGGTAT
GAACTCAGACGTGAACGCTATTATGAAACCATTAGTGATGACGCTAAGTTTCCCTATAGA
GTCCAGTATCCGGTACCACACGCCGATGTCCGTGACCCGCTGCGGCACGGGGCGCCGGAA
GCACGTGAGGAACTTGCGCGCGTCCAGCCTCATCTCCAGCACGTTGTTGATGAGGGCGAA
CAGGGGAGCGAGGGGGAAGGCTGCCACGAATATCGTTACGAAGCCGTATTGGAGGATCAT
TTCTAAATATTCAGGAAACAGTCCCATGTTCCCGAAATCGACTAGCTTGAAATCCTTTAC
CCATTGAAGAGGACTTTTCAATTGCCTCTTCCTGCCTATAGTCCTGATGACGTTCCACCA
GGACAGCAAGTACGGCATCAGCATCTCGACCACCGTGTTGATGAACTGCTTGCCCACCAT
GATGATGGCCAGCTGGATGGACAGCTCTAGTAAACAACCGCCTGGAGCACACTCCTCTTG
TCTATGCCCGAAAAACCTTATATACTCTCCGGGCCGACCGATGATCTTGCCTTTAAAGAA
AGCTATATAAAATATCGACGCGTAGTAGTTGACGAATTGAAGTAGATATATCTTGAGTGT
AAGAGAATCGTCGAATTCAGTTTGTGTACGAAGCAGTTCCTTTTCCGTCAGCCATTCCGC
TAAGTATTGATAGATATAGTTAAAGAGGAATATGAAGCACAGGTTGATGCAGGCGGCGGT
GGCCGTGGTGAACATGATGGGGCTGTAGGTGATGAGCACGTTGTCGTTGTGGCGCAGTAT
GGCGGCGCCCAGCAGCGACATGCGGTACAGCACCACGCCGAGCACGGTGGCGAGCGCGAG
CAGCACCAGCAGCGCCACCACGCTGAACGACATCAGCGTCGCCGGGAGACGCATGCGCCA
GAACGGTACCATGGGCTCCGTCTCGCCTGTCACTACGTTTAGCTGTCTCCGTTTAACGTG
CGCCAACCTGGCGAGGTACTGCGGCCTCGGGTGTTCCTCGTACACGTCGAACCCGGTGAG
GTCCCAGCGGTGCGTCATCTCCGCCGAGTAGCGCTTCCACAACTCGAGGAAACACGCCGC
CCAAAAGCTCATGAATATAGCGAAGAACACAGTGGTCGAGTTATCGAAGAGGTACGTGAT
CCGGGACTGCATGCACGTCGCCTTGAGGTCCCAGTACTCGCAGAAGTAGTCGCACTGAGG
ACACATCTTCACTGTCGAGTTGTACTTGCAGATGTCTTCGCTCGGTTTGTTCGAATAGAC
CGTCGCCACCGAGTATATGAAACAGATGAGACCGACGAGAGACGCCGGGATCAACATGTG
CGTGTAGAAACCGAGCCACGCGAAATATAAACCTATTTTAACACCGAAATAATCTTTAAC
ATAATCTAGCGGTTGATACTTGAGACATTTAGATACAGCTGCCCACTCCGTGTACAGGAG
ATGTCGCATCGAGCCGGGAGTTTTGAGATCACCATCGTGTAAGGGATAAGCCGCGCTATA
AGTACAATTAGATATCAGTCTATTGATTCCGAAGGCGAAGTCATCACCCAACCTCGAGAA
CTTCTTCCTGTCTAGTATGAACTGGACTATACGAGAACGAATCGAAGGCGTCCAGAAACA
TTCTGATGGTGTGTCGAATAAATATTCCTTATCCTTCGAGTAAATGGCAGTCAAACGATG
TTTCCTCTCCGGGAAAAGGTCGGGATCGACTCTGATCTTCGAGAGCAGTTTGTCCCACGT
TGCCTCCACGCGATCTAGAAAGTTGTTCGTTTTCACCGCAGAAAACTTGGAGATATACAA
TGCAGCGTTCAGTATCGCATTCGTCCGTCCAGATTTCCTTATCTGACTGCCATCCTTCAT
TGGCATCCTTAATTTTAAAATCTCACTGTAATCCCTCAGTACGTCTAATGGGACGTGTAT
CTTAACAAAGTTCAGTCCATACAATCCGGCAGGTTCCTCTCTCTCTAACTGCAGTCCATC
ATGTTCCAGATTCTGTTCGAAGATCTTTCTCTGCTCGTAAGCTTCGGGCGTGGTCGCGTC
ACTCTTAGCGCTTTCCCAGACTAACACGTAGTCAATGGAACGAACGCCATCGTTGAACGT
GAGGGAGGGGTTGTTGAGGATGCCTCCCATGACGATACGGTCAGTGTTCATCTCCTGGGA
CAGGTTGTCCTGGTAGTTGCTAAGCACCGACATCGCGTGGATGTCGCCGATCTTCTCTTC
GCTCGTCTTCTCCGTTTCGTGAAATTTTTCATCTCCATCTTGGAAGAGTTGTTGGAAAGC
GAGCTCGTTTCTCTGAGAGTCTGACAAGAAGGACTCTGTTTCTGCGCCATCGTTTCTCTT
GTGTTGCAGCTTTACCCCGCCGGTGTACAGGGGCGTCGCTATCTTAGGAGTAAAGACATT
CTCTTCAGCTTTCAAAAGAGGTTTAGGAGTATCCTCTTCCAATGATGGATCTCCGTCTGA
CATCACAATAATACAACTCACAAAATCATGTCAACACTTGAAACTTTTGCACGGAGCTTA
GTCACACGCGGCTTCTGAGATTTATCGCGAATTATTCAATCTTTTCTATTTACGGGCAAA
GGTGAATGTACACGATTATTTTTTTCCGATGACCGCTGTTTTATTAATTAAAAATATTTG
ATACGTTTGCCGGTTTATAATAATTTACATTTATTTGTG
(3339 bp)

- SilkBase 1999-2023 -