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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26350_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_collagen_type_IV_alpha-3-binding_protein_[Papilio_xuthus]
Ontology
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0035621 P ER to Golgi ceramide transport
GO:0070273 F phosphatidylinositol-4-phosphate binding
Transcript
Level		FPKM:11.58 TPM:9.74
ORF EntryO_TrvaMG12288_complete:A_TrvaMG_comp26350_c0_seq2
Sequence
(Nucleotide)
CAACAATCCACTGTTGTAAACGAATTTCTATTTTCGTAAAAAGTTAATTTCTACTTCTTT
AGTGTGGTTTTGGATAAATTTGATTTAATGTTAGCAATTCCAAACACTTAACTCAATATG
ATTGACGAAAACATAACAGTGAGCGACAGTTCTGATTTAGAAGAGGGCGGAACTCCCGAA
CTTCGCGGATATCTGAGTAAATGGACAAATTATATCCATGGCTGGCAGGACAGGTTTATT
GTACTAAAGGATTCAACGCTATCTTATTACAAGAACGAACTCGAGAGCAATTTGGGATGC
CGCGGCGCCTTGTGTCTCAAAAAGGCTAAAGTCAAGCCTCACGAGTTTGATGACTGTAGA
TTTGATGTATCTGTTAGCGACTGCGTATGGTACTTGAGAGCTACGAATCCAGAAGAGAAA
CAACAGTGGATTGATGTTCTAGAGTCTTTCAAAGTTGAATCAGGGTACGGTACAAGCTCG
GACAGCAGCTCAAATGGAGGTGGACTGCAGAGGCATGGTTCTGCCACTTCACTTCAGTCT
ACAGGGTCACATGGTCGTTCAACACGCCGTCTCACAGAAAAGATTACAGAGCTGGAGACA
TACAATGAACTCCTGTCAAAGCAAGCAATACAACTACAACAGTACTTTGACATGTGCATT
GATTCATACCCAAAAATAGACGACGTTAATGAAGCAATTGATGCTGTTAAATTAGCTGAT
GGTAACGATCTAAGGCTACACGCGGGCGAAGTTCGAGCGACGAGTACGTCGTTCCGTGCG
ACGTGTGGCGCGACAATGGCGACCTTACAACACTGCGTAGAATTGTTGCGTCGGCGAGAG
AAACAGGCGAGACAAGCTGAAGATTTATACATGGCCCTCAAGACTCAACTAACTGAAGCG
AGGTTAGCATCTAAACCTGGACCAGATCATGAGGAGGGTCCACACTCCACCCTTCCTGAC
GACGAGTTCCACGATGCAATCGAGACGGGCTTCGACAAGATGGAGGAGGAGCGATGCTCG
CGGGTGGCGCCCGGTGTACATACTAGAGATGAGGTCGAGTTGCCGCCGCCTGCCATCGAC
AACAGACTCACAGTGCACCCCTTGTGGCCAGAGATCGACAGGATATCAACAGAACAAATA
CAGGCCGCGTTCGAAGGGGTCGGCGGTGAAATCGGGTGGCAATTGTTTGCTGAAGAGGGC
GACATGAGGATGTACAGAAGGGAGGTGGAGGTAGACGGTATGGTGATGGATCCCCTGAAG
GCGATGCACAAGGTGCGCGGAGTGTCGGCGCGGGAGATGTGCCATTACTTTTTCAACCCG
CGGTACAGATACGAGTGGGAAACTACCCTGGAACAGATGACAATAGTGGAGGAGGTATCA
TCCGACGCGCTAGTGTTCCACCAGACGTTCAAGCGCATCTGGCCGGCGTCGCAGCGGGAC
GCGCTGTTCTGGTCGCACGTGCGCGCCTCGGACGACAACACCTTCGCCGTCATCAACCAT
TCCACCACTAATGCTGAGTATCCGGCTAACTCAAGCGCGTGCATCCGTTTGTTCGTGACG
GTGTGTCTGGCGTGTCGCAGCACGTACCCGGCGGGCGAGCAGCCCACGCGGGACAACGTC
ACTACCAGCATCGCCTACTGTAGCACCGTAAACCCCGGCGGTTGGGCCCCGGCCGGCGTG
CTCCGCGCAGTGTACAAGCGCGAGTACCCGAAGTTCTTGAAGCGTTTCACCGGATACGTC
GTGGAACAATGCAAGGACAAGCCGCTCGCCATCTAGCGACAACACGCCCGCGCAGGTGAC
GGATATGTGTAATACAGGGTGTTTCATATTGTATAAATGAATTGAGTTCTTTGAATACGG
GGTGTTAAAGTGTGAAATAGGCTGGGGGGACACATTTGTTACAAAAAAAACTTTATTTTT
TCTGTTTAGTATTTTGGGAGCATTCGCTTTACACCCTGTATAGATAGGCAAAGCAGGTTC
TATGTTTTCTGAAAGGAGAAATTTTACTGAAAAAGTACTATTGGTTTTGAAATTTCGAAA
TACTACGAAAAAAAATACGCGTGTTTAAAGTATTTTAACAAGATTTTTTACTCTGAACTT
TAATTTAAAAAAAATATTTTTATCAAATATTATATTGCTTTATGAAATAATTTCTCCATT
CAATGAAAATACTGTATTTAAAGTATGTAATCTATTCATTTAACATCATTTTGG
(2214 bp)

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