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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26329_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106135782_isoform_X1_[Amyelois_transitella]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006897 P endocytosis
GO:0008270 F zinc ion binding
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031410 C cytoplasmic vesicle
GO:0046872 F metal ion binding
Transcript
Level		FPKM:15.11 TPM:12.72
ORF EntryO_TrvaMG12197_complete:A_TrvaMG_comp26329_c0_seq2
Sequence
(Nucleotide)
CGAATTGGCTGAAATGTCAAAGAGAATGTAATCAATGTGATGAAATCGTGAAGTCTATTT
TGATCTGTGTCTGAAAGCAATCTCTTTTCGCGTAATTTCCGATAACTTTCCTACAAATTA
TCGATAAAACAGTTTTCATCCGGCCCCATTGTACTGTGTAATTCTGTTTGCTTTTGAACT
CGTGTTTTGTGCAAAAGTGTATTTTCCAACAGCCAGTGTGTTTGATATCGAAAATTACTG
CAACGGTGTTGAAGAGCGGCGGTCACCGTCGCTGGTGGTAAGATGCGTTCGCTGCTGGCG
TACTACGCGGACGCCGTGATGTCTGTGGCGGCGCAGGGCGCGGGCTGTGCGCTCAGCTGC
AGCGGCCGCGGGGACTGCATGAACGGGACCTGCCTCTGCGAGATCCGGTACTCGGGCGAG
GGATGCGCCGGGCCCAACCTGCCGTACCATGTCTGTATCGGCGGTGTATTCCTGCTGGTC
GCCTTCGTGTGCGCGGTCCAGCTGATGCTGTGCGTCATCTCGGAGTACAGGAAGCTGAAG
GCGCCAACATTCCTCAGAGCATGCAAGGTCACCACTCAGAAGATGTTGTATCTCGTGTCC
TTCCTCGCGTCTCTCATTCGAGGAGCATACTTTGTTTCGCCGTCTGCATTTCAAGAGGGA
TGGGCGACCAGCCTTCTCTCCGCTTACTATCCATTACTGATGTCCGGGTCATCATTGATA
GTATGCTTCTGGGCCGAGGTATTTCACCTTCGCAACATCCGCTGGGAGAGTCCAAGGTTC
CTGTCCAAGTCGTTCCTGGCCTTCGTGACCTTCAACCTCATCAACTACTCCTTGCTGGCC
GCCGAGGTGCTGACCACCAACATCGCTGACACTTCTGCTGAGAAGAAGACCTTCTACCAG
CACATCTTCAACGGCTGCTACGCTGTGCTGCTGTTCATCGTGGTCGTGTTCTTCCTTATT
TACGGAGTCGAAGTTTTCTTCAAACTCCGCGGTGAATTCCTGAAGGAGACGAAAGTATGC
ACGATCATATCCCCTCGACCAGGCACATCTTCGTCCACAGACGGTGATGAAGCCCAGGAC
ACATTGGTCACTAAACAGGGCATCCAAACAGACCTGTTAGACCACGATGGGGCGGTGGAC
CCTCGCTCGGTAGACCTGTCTCAACTGCACCAGTCGCGCGTCGGCCTGATCAGCCTGGCG
CTGATGCTGATCCTCATTGTCTGCTTCCTCGCTTCGGAGACGCTCAGCGAACTCTGGAAG
ACTAAAGTGCCAGTAGTATCTCGCAACTGGCACGACCTCGTGTTCCGTCTGGCCGAGATC
GGCGTCGCAGTATGGTTCCCGTGCGCGCTCTGGAACTCGATGGCGCCCGAGAGGCTGTGG
CTCCTCAACCCGCGCCGGCTGCTCGCCAGGCAGCTCGACGACGCCAAGCTAGCCGACCTA
CTGGCGCAGCACCATCACGATGCAAAGACGTTGGCCGTGCTCGGCCAATTCAGTTGGCGT
CACAAAGCGCGATACTTTTTCGAGTTGGCCAAATATTGGCTCATTTGGAAGTTCGCTATC
ACTGTCTTTTTCGCACCTCTTCCTTTGCCTGTTAACGTGAAAGAGACGCAAGTAACCGAA
GCTGGTAAAACTGCAAAATCTAAGTTGAACGTGGAAACAGACGGTCTGGTGGAGGGGGTG
GGGTCGAGCCGCGACTGCTGGATCTGCTACGACAGTTCCCGCCTGGAGCCTCTCATCAGA
CCCTGTCGCTGCACTGGAGACGTGTCTGCTGTTCATCATGACTGTCTTAGCAGGTGGCTG
GTTGAGAGTGCCACGTCACCCGACGGTTTGAAATGTAAAGTGTGCAACACTCCTTACATC
GTGCAGGCGACTAACAGAGTGGAGTGGGAGCGTGGGTTCACGTGCGCGCACTGGGCGGGC
ACCGTGCTCGCCGTCAGCGTACTCATAGGCGCCGTGGCGGGGGCCTGGGTCATCACGCAA
CTGTACCCCTCCTCCTTGGTGAGGGTGCTGGCTGCCGGAGCCGCGCTGCTCATCGGATAC
ATAGCGCTCAGGTTTCTCGGCACGAAAACAGTTTCGGCGTACCAACGGGCGCGGGTATCC
GGTCTCAAGATACTGACGGAACCCTTCGTCGACCAGGACCTGGACCAGAGCCAGCTTTCC
ACCATCAGCAAGACGGTCACCGTCGAGATAGCGCCCAAAGACGTCCTCGACCACGCGCTG
AAAGGCGAACCGAAATAATGCAATTAATTGAAGCAGCTAACTGATAATTGAACTTTGAGC
GATCGGTGTGCCAAAGTGATGTGATAATAACTAGTACGAGTATTTGTTAAGGAGGTTTTC
GGCAACTAATTTCGTCGATTTTGAAACTTGTTTCGTCGATTGTGAAACTAATTACGTCGA
TTGTGAAACTTGTTACGTCGATTGTGAAACTTGTTACGTCGATTATGAAACTTGTTACGT
CGAGTGTGAAACTGATATCGTCAATTTTGAAACTATTTTTCGTCGATTGTGAAACTTAAG
TGAAACGACTTTCTAGAATTTAGAATAAGAGTATATCAAGAGGCTCTACTTGTAAATTAC
ATGAAAATAATACTATTTATAGAAACTACAAAACTCGTACTAGATTTCGGTATGTCAAAA
ATATTAATTTTTCGTGAGAAAATGTCATATTTTCATATCATGATTTTTGGTGACAGTGAA
CAGTGATTGTGTGATAAAAACTAAGTGTAATTTGACTGTCAATGTACTTGAAAATACCTG
AAAATGTGATAAAAAGACAAAACAAGCTACAAGAAAAGTGAAAATTTTAAAAATGACTAC
AATGAACATTTTTCGTTATGAAATATTAAGTGATGTAATAGTGATATGTTTCAGACCCTT
TGCCCTTAAATTTACAAAAAGAAAAAAATATTGTAAATAAAATTCAAATTAATAAAATAT
CTTCAACGAAAACAAAAATGTTGAGAAGAGTTTCAAATCAACAAAAAAATTGGTTGCCTG
TAAAG
(3005 bp)

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