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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26318_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_alkylated_DNA_repair_protein_alkB_homolog_8_[Plutella_xylostella]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0002098 P tRNA wobble uridine modification
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0005506 F iron ion binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0015630 C microtubule cytoskeleton
GO:0016300 F tRNA (uracil) methyltransferase activity
GO:0016491 F oxidoreductase activity
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:2.84 TPM:2.39
ORF EntryO_TrvaMG12169_5prime_partial:A_TrvaMG_comp26318_c0_seq2
Sequence
(Nucleotide)
GTTCCGTTGGCCCCGCACCGGTCCTTGCACGTGTCGATATAAAACTCTGTGTGACGGGAC
TAAGTGGTGCCTTCCAGAGACCATCAGTAGTGATGTGGCTGATAGATTAGAAGATTTGCA
CGTGCATCAGGTATACGAAGAGATAGCGGGACACTTCAGCACGACGCGACACAAGCCGTG
GCCGCGCGTAGTGGAGTTCATGCAACACGTGCCGTCCGGGGCGGTCCTGCTGGACCTGGG
CTGCGGGAACGGGAAGAACGTGTTGCACAGGAAGGACATACTGCAGCTGGCGTGCGAGAG
GAGCGACGCCCTGCTGCGGGAGTGCAAGGTCGCCGTGAGGAACACGTCCGTCGCGGACTG
CGTGCGGATGGACCTGCTGCACTCGCCCATCAAACCCGAGTGCGCGGACTACGCCATATG
CATCGCTGTTATACACCATTTTAGTAGTCATTCTCGCCGTCGCGAAGCTATAACAACAAT
ACGCAATCTACTCCGGCCAAACGGACAGGCTCTCATCACGGTCTGGGCTCAAGATCAAAG
CGGATCCAACTATCTATCCAAAACCACATCACCATCCAACGAACAGACCACACAAGCTTT
CGAAGACTTGGAACTGCCCGTCCATAAAAACAGAACCCAGTTCCAACATAAAGATTTACT
CGTACCTTGGAAATTGAGGAAGAAGACAATACCTAATGCTCCAGAATGCACCTTTTTGAG
ATATTACCACGTGTTTGAGCAGGGAGAGTTGGATAGTTTATGTCAAGAAGCTGGATTGCT
CGTCATCAGGAGTTTCTACGAAGAAGGAAATTGGTGTGTTGTGTGTATGAAAGTGTAATA
TGTGATATCATTGAACTATTTATTTATTAATTAACAGGAAATTGTGTCAGACGGCACGTC
CAAACTTTGTAGTTTTGTCAGTGTGTAATTCCTTCTTATTGATATTCCTTGATGTAACGT
TATGCTTATACAGTAGACAGACCTTTTAAACTTTTGAACTCTTAAATTGTATGCTTAACA
ACTACCATAAAGTTTCGATTATATATACCATAGATAAACGATTAATTAGCGCCATTATCT
TTTTGGGCGTGGCAAAAATATTTTGGTAGAAGTTGTGATATGTTTAGAGACGTATTTTTT
AGGAGTTTTCTTCGGGATCAGTCCATCTAGTAATAGTAGATCGATGCATATAAGACTCAA
AATGCGAGTTGATCACACTTGTTTATATGCATTATGAGCCCTATGTTATGGCGTGCGTTT
AACATATAACTGAATAGTGGAAAATTTTCAGAATTCAACTTTAATTAAAGAAATGACGAC
GAATGTAGACGACTTTAGTACTTTTTTTAATAATATGTAACTTACTTGTGATGTAGAAAA
TAAAACTAAGAATAACAAAA
(1400 bp)

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