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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26316_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_atlastin_isoform_X1_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005874 C microtubule
GO:0007019 P microtubule depolymerization
GO:0007029 P endoplasmic reticulum organization
GO:0007030 P Golgi organization
GO:0007517 P muscle organ development
GO:0007528 P neuromuscular junction development
GO:0008152 P metabolic process
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016320 P endoplasmic reticulum membrane fusion
GO:0016787 F hydrolase activity
GO:0031114 P regulation of microtubule depolymerization
GO:0031227 C intrinsic component of endoplasmic reticulum membrane
GO:0032561 F guanyl ribonucleotide binding
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0051260 P protein homooligomerization
GO:0061025 P membrane fusion
Transcript
Level		FPKM:11.92 TPM:10.03
ORF EntryO_TrvaMG12164_complete:A_TrvaMG_comp26316_c0_seq2
Sequence
(Nucleotide)
GAGCAGACAAATCTGTCTACCCTTGCACTCGTTCGTTTGTACCGTAAAATATGGTCTTAA
ATCTACTTTGTTACCCAAATCAACTGCTATATCCACTATTTTACTACTATACCCAAAGTT
CCATATAATATTTACAAATTTTTATATTGCGTATGAAAACGAGCCTTATGCCAACGACTT
AAGGTCGTTTGTTAGTATGAAAATATGATATTTTCGTGTTGAAAAATATTGCTTTTAATC
GTGATTTTTTTATATGGTATAGCCTAATACCAAATTATCTAAGTTGAGCAATCTTAAACT
CTATTTCGGATGAGTAAAATAACTTTAAAACATTTAAAATTATTAAAGGCTTTCGGACAT
TGGAGATAGGAAACAAACATGAGTTTTTAAGATAAAGTTAAAATTCATAATGCGAATGAA
AAAGGGGGACAGTTTCAAAAACCGTTACAATAAAACATTTATTTTCATTAATAATTCGGT
ATTTAATCTACAACCATACTAAAAAACTTAATTAATTAAGTAAATCTTTGTATTCATTGA
TTTTGCAAATTATAAAGTAAAAACAAAACACAACTATCCGTAAATTTGAAAATTCAACGA
TTTAATCGTACAAAATTCCCAATCAAACAATAACATTACACTATCGACTATTTTAATTAA
CAAACCGTCGTGCTCGCGCCCGCCAACATGGCGGCTGCGCTAGGCCCCGCCCCGCGCTGT
GACGTCACGCGCCAGGCCCCGCCCCCGGTGACGTCATCACAAGTGTTTGTGTTTCCCGTT
GTGCGCGAGCGTGGGGGCGGGGCCGGTGGGCGTGGGCGGGGCGACGGCGGCCGCGGCGGC
GTGCTCCATGCCCTTCTCTAGACACGTTTGATACATCGGTTTCAGTACATTATCCCACAG
TACTGTCGCCGTGTCGTCTATAGTAACGCCAAACTCTCGCATCTCACCGCTGTACCTGAT
ATAAGCCCACAGCACGAGCGTCAACAGCGCCATGCCCATAGCGAAGTTGCATATGTTGGC
GAGCGGGTACAGCCCCACCAGCCCCAGCACGCCGCTCAGCACGTAGAAGAACAGCGCGAT
CGCGAAGAACACGGAGGGGGTGCGCGCCGCCTTGAATATGTTCTTGCTCTCGTTGTGCGC
TTTGAACTGGATGAACTGCTCTTCTAGGTCCTGCGCGAGCTGCTCGCAGTAGGCCTGGCT
GAACTCGCGGCCGCCCATCTTCCGTTTAGCGTTGAAGGCGTGCATGGCCTTGTCCCTGAC
GCGCGTGTGTTCCCCCTGTAACAGCTCGGCGTGTAGGTAGGGTCTGGTTCCTCCGCAGAC
CTCCTCCATGAGTCTGGTGTACACCTCCTTGGCTTCCGCCACTGCTGTCAGGTTGTTGGC
TTCTGCTGTCGCCACGAGCATACTCTTAGGTTCAGGCAGTTCATTTCCTTTGTAAATATT
CATGTAAGACTTGAAGTACTGCACAAGATCCTTGGCTTTCACTTTCTGTCCGTTGATCAG
TTTGGGCACTAAGTTCTCCGGAGCCAACAGCATTGGGACGAATTGTTGTAAGGAACGTTT
GAACTCGGATTCTATGTCAGTAAGTCTACCATCAAACTGTGGGTTGGTCGCGACCTTCAG
TCCAGGGTGCGGCATGAGGAAGCACGCCAGCTCAGAGAAGCAGGACGTGATGTGCTTCCG
GAGAGATTGGAGCTCGGGGTGCTGCTTGTCTGATACCTTTAACCTCCTAGACAATATCTG
CATCCCCCCGTCAGCTCCGTAGGGCGCCTCGTAGGGGAAGCTCCAGTCTCTGACGAGGAA
CTGCAGCCGCTGGAAGGGAGTGCGGCCGCTGTCCTCGAGCGCGAGCCGGCCGTACTCTGT
GAACAATTGTAAATGTTGCAGGTCGTCCTCCTGTATATTCTGTGACAGGTTGTATATCTG
CACGGAGGACAGCATCGTGGAGAGAGCGAACACGGTCGCGCAGTCGCGGACAGTCGACTC
GCTGTCGAACGCGCCTTGTGTGTCCAGGAGAATTATTGCTACCTTTTCACCATCTTCAAG
TGTCGCTTTAAATATCTCCGACCACATGAGTATGCCGGTAGTGTCTCGCTCCGAGCCCCC
TCGCCACGAGAACCCCTCGAGGGGGTCATCTTCACTGCCCAGCCAGTCACTGCCGCCGCC
GCCTGAACCATACTTATGGTGCATATATCTCAGAAAGAAGTCCAACAAGAACGACTTCCC
TTTCCTGAAGGCTCCAGCGACGGATATAACGACAACGGCTCTGTCTTTAACATCATCTTT
CAGCAGCAGAGACCTTAGTGTGTCTTCGTCGAGAGTGAACGTGTGGTCCGGCCCAGTGTC
CACTACTTGCACGCCGTGTGGACCACGAGGGGCTGGCGTTGGCTTCTCTGTTACTTCTCC
CTCATGGTCACTGTATTCTCGTGTCTTGTGTTTATGTCCTTGGTTTTCAGCCATACCTAT
TCAATTTATGCACTAACTTCACTGAACATAGCGACGTAAATTTTTT
(2506 bp)

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