SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26315_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_serine/threonine-protein_phosphatase_4_regulatory_subunit_3_[Bombyx_mori]
Ontology
GO:0000775 C chromosome, centromeric region
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006909 P phagocytosis
GO:0007391 P dorsal closure
GO:0007405 P neuroblast proliferation
GO:0008105 P protein localization
GO:0016020 C membrane
GO:0016601 P Rac protein signal transduction
GO:0030289 C protein phosphatase 4 complex
GO:0043505 C CENP-A containing nucleosome
GO:0055059 P asymmetric neuroblast division
Transcript
Level		FPKM:4.71 TPM:3.96
ORF EntryO_TrvaMG12158_5prime_partial:A_TrvaMG_comp26315_c0_seq1
Sequence
(Nucleotide)
AAAAGCTGCCTAAAAGTTTAGCTAAGGGAATCTAAATACTCATTTTTTACTCACAACAAA
ATAATACTTTCTACTAGAAAAATACTTCAGAAGAACGTAAAGAAATTGTATAGAAATAGC
TCGCAAATAAGGAATGCAAACTGCAAATAAATAAATAACATACATGCAATTCTACATCGC
GACCCAATTAAGGCCTTAGGATCATTTCACTATTGTTTTAGTTTCCTTACAGAAAAATAC
ATATTTTTATTCAACTCGTTCAACAAGCTGAACAATTTAGTACATCTGTAAGGAGTCAAA
ACAATAATAGTTCTTTTTTTAAATAACACAGTAACATTTTAGTGAATAGAAAATCCACAG
CACAAGTTTATTTTAAAAGTTTCCCTAAATATTGGTCTTGTGATCAATCATAAACTAACA
CTTTATAAATACATTTTTACAATTTCGTTCATTATCGAAACTAGTATCTTTATTCATCTA
TTTTTAATGAGAAAAATCTCATTCTTACTCTTTGTACTTTTTGTGATAAACACCGACGAT
AGTAACCTAACCGTTAACATTACTTCATATTAAATACATTTCATTAAATTTGTTCTAAAT
TCTGATGTCATTCAAACAAAGCTACGGGAACCATACACTAAACTTGACCACCAAAGCGTC
ATTCCTTATTTACAATGGACTAAAATCAATTAATTTAATGTTCAGTTAGTTTGACTTTGG
ATGATGACCGTAAATTTTATGATAAAATATCACAATTCGTTTTTTTGACAAGGCTTTATT
CACGAATATGCTAAGACTGCAAACCAGTTTCTATTGATAAAACAAAATGCACATAAAACT
ACTAATTATGTACATTTTATTTCCTTTTCAATGGCAGTAATCTGGCTATTAGTGGAATAA
CAACTGACATTGCTTGCTATAAAAAGGTAACTCTTTGAGAATGGAGTTATACACCGTTTT
CGCTGCTTTGTTGCAGTCTATTTGTCTTAAATTTTATGCAAAATAATCATACACTGTTAA
CAATTACTTATTTAACAGTGTCGCCACGCATGGCGCACCAAGCCTCTTTAACGGCCAAAT
TTTGCACCAAGAGTCAAATCAACCAAACTAGTTTGTATTATATTGCTTACGGTCGTATAT
AACTGGATCTGTAGGGCACAGCGTCGCGCGCGATGTATTATATTCCTTGAAACAGTGTAG
CGTTGTGACGGGACTACGAGAGCCGCGGTCGTTTCGCGTCTCGTTCCTCGCCCGTGGCGC
CACTGCTCTCTTCCTCTTCGTCTGAATCACCGTCGTAGTCTACAAGACCCTTATTGAGTA
ATCTGGGCGTGGATACCTGAACATCTGCGTGTGTTGGTTTGGGCGACGTCGCCGTTGTTA
GTAGAACCCTGCTCGGTCCATTCACTGTCTCTGGGTTAGGGCAAACTTTCTTCTCAACTA
TTTTACCAATCGCGTCAAGGCCGTGATGCGTGTGCGCGTGCGGGTGTGCGTGCGGCTGCG
TCGAGTCTAAAGGCGCTTCGTCTTCTAATTCATCGTCGTCATTGAACCACATCTCTTCCT
CCTCGTCCGGCGCTCTCGCTTCCCGGCGGTACCGCGTGCGAAGTAACGATGGGACTACTG
CTTCCGTCACTCCGACACTGCCGCTCACTCTTTCCCGTTCTTTTAATTTGTCCTGATGTT
GGTCGTATCTTGTTTTTAAAGCTTTAAATGTCTGAACATATTCAATATCTTCCAATATTT
TTCCATAGTTTTCAACAACAT
(1761 bp)

- SilkBase 1999-2023 -