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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26279_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ankyrin_repeat_and_zinc_finger_domain-containing_protein_1-like_isoform_X4_[Bombyx_mori]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0016020 C membrane
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036266 C Cdc48p-Npl4p-Vms1p AAA ATPase complex
GO:0046872 F metal ion binding
GO:0071630 P nuclear protein quality control by the ubiquitin-proteasome system
GO:0072671 P mitochondria-associated ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:3.77 TPM:3.17
ORF EntryO_TrvaMG12051_complete:A_TrvaMG_comp26279_c0_seq1
Sequence
(Nucleotide)
CACAATGTTGTTTAATTTATCATCAATTTAACAATACGTAAGACGTGTCAATAGTGTTAA
GATATTTTTATATAAATCAGTGACAATGTCGTCAAAAACGGAAACTGTGAAGACAAAAAC
TGTAAAAATATATGAAGCAGATGAATTTGAAAAATTATTGAAAGGTGTTCATGTTGCAGC
ATGCATGATAACAGAATCACATAACGTCATTGACGAACAAAGTGTGCTAAATAGACTGAA
TGCCTTAACTCTAAATGGTGCATCGGACGGTAACTGTTGTTCCTGCTGCGGTGTCGGACC
GTTTGAGACGAGAGCACAACAGACAGCCCATTATAAGCACCACTGGCATACATTTAACTT
GAAGAGGAAACTATTTGGAAAATCAGCATTGTCTCTCGGTCAATATAACTCAAGAGAAGA
TGAATCTAGCAGTGAATCAGAAGATGAAAGCAGTGCGGACAGTAAAAAACCGCCAAGTGA
TCTATTTGCTGCCGCCACTCGACACTGCAAAGCATTCTTTACTAATCAATCCGGACAGGT
GTTCTGTATTTACAGATGTCTGCTACATCATAAGAAGGAAGAGCTATCTACCGACGGCCA
AGGAACCGTCTGGGTGGACCGAGTCCAGCAACTCCTGATCCCGGGCTACCAACGCTGGGC
CATCCTCATGGTATCTGGAGGCCGGTTTGCTGGAGCTGTCTTCAGTGGCAGCACTCCAGT
TGTACATAAAACCTTCCACTCGTACGTGACGAGGAGAGGCCAGGGTCAAGCTCAAGCTAC
TAGGGATGCCCATCACGGGAACTCTAGGTCGGCCGGGGCGAGCTTGAGACGGTATAATCA
GGCGCAGTTTCTTGAGCACATTCAAGAATACATGACCCAATGGACAGAAGATCTTAAAGG
ATGTTCACTAATATTATACAGAGCTGTTGGTTCTCTGAACCAGGCTGCCATATTTGGGAA
GAGCTCTCCCATAAAAAAAGATGATCCGAGACTAAGAGTTTTACCCTTCCCTACGAGAAA
GGCTACGTTTAAAGAAGTGCAGCGGATACATTCCACTTTGGCTAGCTTGGAAGTTTACGA
TTCATTGGAGTCATTCCAGAAAGCATTGATTGCTTCAACGGGTAAACCGATGAACAAAGG
AATGCTGGATATCAGCAGTGAGGTCAAGAAACCATCCAAGAAGAGCCCTGGTAAAACTAT
AGACAGAGCTAAATCTAGAGAACGCACACCCAGAGAATTACCCACACAATTACTATCGAG
CGAAGACGAAGGTCCTTGCTTCATAGATTCAGAAACCCCGGCCGGTTGGATAAAAACACT
CTCAGAACAACAGAACAATGGCGTCGTTGTCAAATCTAAGAAAATTTTCTTAAACGACTG
CGCCATTCAAGACAGATCCACGCCAAGTCCTTGCGAAAGTGAAAAAGAAGATTTACAGGA
GATTGTTAAAGGGAAAACAGATGAAAAACGGAAAAAGAAGGATATTGTCGTTAGTAATAA
GGTGGTAGCGCCGAAAATTTCGAATAATATTAAAAAGATGTGGAAAATGATAATAGGAAA
AGATCAAAATTCCCTAGAAACAATTTTCGAAGGTTGGGAGGGAGATAATTTAGCGGAGGC
TTGCAACACTCGCGACCCGAGCGATGGCAACACTGCCTTACATAAAGCCGCCATTGCTGA
AAAACCTGATATGGTCACCGAGATACTGAGAGTGGGTGGTGATCCCTGCATCAGGAATAA
CCAACAACAAACTCCGTACGCCGCCTCCCCGCATCAACAGACAAGACTCGCCTTCAGAAT
CTTTCAAGCTAATTATCCTGATAAATATAATTATGCTAAGTCTCACATACCCGGCCCAAT
AACGCCAGAAGCTCTGGAACAAGAGAAAGAGAAGAAATTACAACAAAAACGAGCGAAGAG
ACAGCGAGAGAAAGAGAAGCAGATTGAGAAAATCAAAACTAATAAGTTCTTGCAGATGAC
TGATAATGAAAAGGCGAAATCAACAGAGAAGCGCTGTTTCCTCTGCGGGTCTGGTCTTCC
GAAGAAACCCTTCGAATACGAATCATATCAGTTCTGCGGGATCCAGTGTCTTCAGAATCA
TAGGAACATACGACCACTTAACATGAGCGCATAAGAAATAAATAAATTAACAAATTATGT
AGTAATTGTTATTTATCTATTCGTCTGGAAACGTTAATTTTTGCTCCACGACGAAATTGG
GCAGTTCGTTCGGA
(2234 bp)

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