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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp26271_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_puff-specific_protein_Bx42_[Amyelois_transitella]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000790 C chromatin
GO:0000974 C Prp19 complex
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0035214 P eye-antennal disc development
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:11.71 TPM:9.85
ORF EntryO_TrvaMG12034_5prime_partial:A_TrvaMG_comp26271_c0_seq2
Sequence
(Nucleotide)
TTTTTTTAGATCAATCTTTTTATTCAGCTAAACATTTACAAAGCGCACCCATTTACAATT
CTAGTTTTACTTAAAAGCAAACTTAGTAATACAAAATGGAAAAAAAAACTTAAAAAAGAA
AAATCTTAAAGTACATTTATTTACTTTTAATCTACATTATAATTAATTAGTATTAACTAA
TAAGGCTTGCAATCGTACCAACATCTCAGTCCCTCCGTTTCTTGTTATGATGGTCGTGTC
TGTCGTGATGGTCTCGTTTCCTCGAAGACTTGTCGGCGCGCTTGGCTTCGCTCAAGAAAC
GATCTAGACCGAACGGATCGAAATCAGCTTCAGGTTGACTGCTGCGGGAAGGTTCTTCAA
ACTGCACGGGACCAGTTCTAGTGTTACTACTGCTTGTGCCAGCAAACTCTTTGTCGGCCA
CGAATCTCCTAGTATTAGCCATTGACTCCAGATCACCATAGTTATCTTTATCAGCGTTCC
TGCTGGGTCGGTATATGTGAGCCCCGATGTTGTCCTGGTTTCTCCACGGTTTATCATACA
CGTTGTATGCATCGTCTTCCGCATAACCACTATCAATCCCCTTGCTGTTGTTAAACAATC
TCTGGTCAAACATGGCTTCCCCACCCTGGTTGGTCTTAGCGGGGAGCCCTAGGGCTATCT
GCTCGGATATATCGCGTTCTCTGTCTTTGGCGAACTTAGACCTCTTATCAGGTGCAGCTC
TAGCCAGATTCCTCTCCCTCTGTCTCTCTTTATGTCTGTCTGCTCTTAACTTATCTCTTT
CTGCAGCACTGAGACCACTCTCGTCTATTTCAGGCTGTTCTATATTACTGTCTTCTTCTG
GGGCTCGAATACCAGCCCTATGATCTCTCGCTCTCTGCGCCAACATCCTCAAATGCTCTT
CCTTCTTCTCCTTCTCCCGCTGAGCCAATCTCCTCTCGAGCTGAGCTCTGGCCTCTACAG
CCTCTCTGGCCTTCCTGTCAGCGATGTAGAGGGCTTCGGCCAGCTTGGAGAAGTTCTCGT
TGATGTGCACTTGTTGAAGACCACGCCCGTCTGCCGCTAGACGCTTGTCGAGGGGTATTG
TGTATCCCTTGGCGTTCTTCCAGTGCGACACGCAAGGCGGCACCTTCCAGTCGCGCTGTT
GTCGCACGGACACGCGGCGCGGGGGGGAGTGTAACACGGGCGCGGGGGGCGAGGGGGCGG
CGCGGGGTATCTTGCGGTTTATCTGGAAGCGGGGCGGCTCCATCGGGTCCGATTGGGCTT
CTACCATTCTTATAACCCTCTGTTTGGCTCCAGAATTATAAGACCCGCCTTGCTGTGCTG
GTGTGTACCTGATGTATTGAGCTGGGGCAGCTTTTGGTGCAGCTTTAACCGGCATAGCGG
CCGATATTTTAGCGTTAGTTAACTTCTCTAGAGCTTGTTTAGTTTTCTCTGTGATCTCTT
GAATGTCATCCTCGTCTGGTTTCTGAAGAGTTGGGTCATCTTCGGCTAGGACTTCAGATG
GTAGTAGATCCGTTAGTTTTGAGTATATGATCTTATCGGCACTATGTCCTTGTCTTGCAA
TAGCAGAGTATTTGACCCTTCCAGACTCATCCAGTTGGACTGCAAGAGCATTTGAGGTGC
TCTCTTTGCCACGCATACCCATGCCGAGAGGGTATTGTGCTACATGGATCTCTGGGAATG
CACCTCCATCTGCAAAGTCGTCCTCTCTCCGAGGCACCCATCCTTTCCGTTCTCCGTAAG
GCGGTACGCTACTCTGAGACACCACGAGGGCGCTACCGACTCTTTTAGCCTTCAACTCAT
CATCTCTGTCCCAAACTTGCTGACTGGGAGCTGGTAATAGGCTCGACAACG
(1851 bp)

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